EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000016624 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 38969 bases
Position: chrBDQW01002177.1:179013-217981
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000022849	MMR_HSR1	PF01926.23	1.7e-12	1	1
ENSSDUP00000022850	MMR_HSR1	PF01926.23	1.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000023267	-	6871	-	ENSSDUP00000022850	1041 (aa)	-	-
ENSSDUT00000023266	-	6229	-	ENSSDUP00000022849	1038 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000016624's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000016624's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000016624	-	55	51.471	ENSSDUG00000023613	-	62	59.606
ENSSDUG00000016624	-	70	63.238	ENSSDUG00000005095	-	96	62.935
ENSSDUG00000016624	-	56	72.978	ENSSDUG00000021006	-	94	75.000
ENSSDUG00000016624	-	52	46.341	ENSSDUG00000020733	-	87	50.000
ENSSDUG00000016624	-	57	50.530	ENSSDUG00000016459	-	79	57.949
ENSSDUG00000016624	-	52	48.837	ENSSDUG00000023239	-	68	53.982
ENSSDUG00000016624	-	55	57.252	ENSSDUG00000016791	-	82	60.280
ENSSDUG00000016624	-	53	43.775	ENSSDUG00000020760	-	69	47.805
ENSSDUG00000016624	-	51	84.685	ENSSDUG00000013443	-	83	83.258
ENSSDUG00000016624	-	86	68.562	ENSSDUG00000005270	-	97	68.339
ENSSDUG00000016624	-	53	49.020	ENSSDUG00000021707	-	71	52.451
ENSSDUG00000016624	-	79	50.497	ENSSDUG00000016851	-	90	48.907
ENSSDUG00000016624	-	52	50.622	ENSSDUG00000023286	-	70	53.521
ENSSDUG00000016624	-	52	63.265	ENSSDUG00000004903	-	63	63.507
ENSSDUG00000016624	-	64	47.922	ENSSDUG00000005123	-	97	47.397
ENSSDUG00000016624	-	52	46.371	ENSSDUG00000020772	-	89	49.533
ENSSDUG00000016624	-	63	77.898	ENSSDUG00000005219	-	99	77.898
ENSSDUG00000016624	-	55	57.554	ENSSDUG00000016809	-	76	55.072
ENSSDUG00000016624	-	51	44.690	ENSSDUG00000003711	-	73	45.050
ENSSDUG00000016624	-	56	84.276	ENSSDUG00000004973	-	96	84.615
ENSSDUG00000016624	-	65	62.735	ENSSDUG00000009253	-	99	61.354
ENSSDUG00000016624	-	52	81.439	ENSSDUG00000016605	-	91	81.061

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000016624	-	80	57.913	ENSAPOG00000008987	-	98	57.217	Acanthochromis_polyacanthus
ENSSDUG00000016624	-	55	51.661	ENSAPOG00000001447	-	69	56.872	Acanthochromis_polyacanthus
ENSSDUG00000016624	-	80	50.088	ENSAPOG00000009034	-	100	49.642	Acanthochromis_polyacanthus
ENSSDUG00000016624	-	80	58.834	ENSAPOG00000017368	-	97	58.106	Acanthochromis_polyacanthus
ENSSDUG00000016624	-	53	54.941	ENSACIG00000007191	-	57	58.049	Amphilophus_citrinellus
ENSSDUG00000016624	-	54	70.866	ENSACIG00000012648	-	73	75.369	Amphilophus_citrinellus
ENSSDUG00000016624	-	77	53.962	ENSACIG00000005198	-	93	53.019	Amphilophus_citrinellus
ENSSDUG00000016624	-	50	60.317	ENSAOCG00000002389	-	89	60.317	Amphiprion_ocellaris
ENSSDUG00000016624	-	87	55.580	ENSAOCG00000022545	-	97	57.065	Amphiprion_ocellaris
ENSSDUG00000016624	-	84	49.379	ENSAOCG00000001095	-	98	47.694	Amphiprion_ocellaris
ENSSDUG00000016624	-	57	61.261	ENSAOCG00000013686	-	96	61.261	Amphiprion_ocellaris
ENSSDUG00000016624	-	54	55.253	ENSAPEG00000021634	-	69	57.346	Amphiprion_percula
ENSSDUG00000016624	-	75	62.754	ENSATEG00000012058	-	96	61.739	Anabas_testudineus
ENSSDUG00000016624	-	81	52.582	ENSATEG00000011352	-	94	52.582	Anabas_testudineus
ENSSDUG00000016624	-	84	48.049	ENSATEG00000011336	-	97	48.280	Anabas_testudineus
ENSSDUG00000016624	-	79	48.851	ENSATEG00000011330	-	95	47.992	Anabas_testudineus
ENSSDUG00000016624	-	63	59.078	ENSATEG00000011735	-	92	59.130	Anabas_testudineus
ENSSDUG00000016624	-	81	61.215	ENSACLG00000012195	-	97	60.981	Astatotilapia_calliptera
ENSSDUG00000016624	-	57	58.596	ENSACLG00000009780	-	88	51.307	Astatotilapia_calliptera
ENSSDUG00000016624	-	54	66.667	ENSACLG00000005669	-	97	66.667	Astatotilapia_calliptera
ENSSDUG00000016624	-	51	72.000	ENSACLG00000005066	-	81	72.000	Astatotilapia_calliptera
ENSSDUG00000016624	-	81	55.412	ENSACLG00000004980	-	98	54.535	Astatotilapia_calliptera
ENSSDUG00000016624	-	78	53.846	ENSACLG00000005679	-	95	53.846	Astatotilapia_calliptera
ENSSDUG00000016624	-	57	58.596	ENSACLG00000009774	-	78	50.980	Astatotilapia_calliptera
ENSSDUG00000016624	-	55	59.701	ENSACLG00000024854	-	84	51.930	Astatotilapia_calliptera
ENSSDUG00000016624	-	93	41.280	ENSACLG00000024857	-	95	40.871	Astatotilapia_calliptera
ENSSDUG00000016624	-	86	41.990	ENSACLG00000024859	-	97	41.315	Astatotilapia_calliptera
ENSSDUG00000016624	-	53	58.798	ENSACLG00000024836	-	78	58.937	Astatotilapia_calliptera
ENSSDUG00000016624	-	67	64.194	ENSACLG00000005220	-	93	64.136	Astatotilapia_calliptera
ENSSDUG00000016624	-	60	38.326	ENSAMXG00000041224	-	60	39.932	Astyanax_mexicanus
ENSSDUG00000016624	-	54	51.292	ENSAMXG00000024930	-	90	51.292	Astyanax_mexicanus
ENSSDUG00000016624	-	51	57.919	ENSAMXG00000037741	-	96	47.845	Astyanax_mexicanus
ENSSDUG00000016624	-	63	46.916	ENSAMXG00000030783	-	91	46.916	Astyanax_mexicanus
ENSSDUG00000016624	-	56	48.418	ENSAMXG00000030288	-	62	54.808	Astyanax_mexicanus
ENSSDUG00000016624	-	51	51.584	ENSAMXG00000030926	-	80	52.093	Astyanax_mexicanus
ENSSDUG00000016624	-	81	43.969	ENSCVAG00000018481	-	98	43.392	Cyprinodon_variegatus
ENSSDUG00000016624	-	78	52.239	ENSCVAG00000023267	-	98	52.273	Cyprinodon_variegatus
ENSSDUG00000016624	-	64	39.777	ENSDARG00000086048	si:ch211-229i14.2	92	40.476	Danio_rerio
ENSSDUG00000016624	-	69	44.625	ENSELUG00000015135	-	89	49.711	Esox_lucius
ENSSDUG00000016624	-	87	50.000	ENSELUG00000015076	si:ch211-229i14.2	69	45.120	Esox_lucius
ENSSDUG00000016624	-	71	44.110	ENSELUG00000015106	-	73	49.057	Esox_lucius
ENSSDUG00000016624	-	60	53.156	ENSELUG00000005405	-	86	54.406	Esox_lucius
ENSSDUG00000016624	-	76	55.482	ENSFHEG00000019202	-	85	59.801	Fundulus_heteroclitus
ENSSDUG00000016624	-	74	57.449	ENSFHEG00000000207	-	79	59.615	Fundulus_heteroclitus
ENSSDUG00000016624	-	76	58.306	ENSFHEG00000013865	-	86	59.543	Fundulus_heteroclitus
ENSSDUG00000016624	-	81	52.921	ENSFHEG00000011334	-	97	52.570	Fundulus_heteroclitus
ENSSDUG00000016624	-	81	41.806	ENSGAFG00000015999	-	94	39.218	Gambusia_affinis
ENSSDUG00000016624	-	87	47.443	ENSGAFG00000001852	-	99	47.008	Gambusia_affinis
ENSSDUG00000016624	-	87	46.945	ENSGAFG00000015908	-	92	44.889	Gambusia_affinis
ENSSDUG00000016624	-	81	57.876	ENSGAFG00000015917	-	96	57.343	Gambusia_affinis
ENSSDUG00000016624	-	82	54.375	ENSGACG00000013107	-	99	54.768	Gasterosteus_aculeatus
ENSSDUG00000016624	-	81	61.494	ENSHBUG00000010247	-	97	61.260	Haplochromis_burtoni
ENSSDUG00000016624	-	75	64.781	ENSHBUG00000011672	-	88	48.511	Haplochromis_burtoni
ENSSDUG00000016624	-	72	59.825	ENSHBUG00000020633	-	88	58.569	Haplochromis_burtoni
ENSSDUG00000016624	-	79	54.043	ENSHBUG00000003015	-	90	51.346	Haplochromis_burtoni
ENSSDUG00000016624	-	54	74.046	ENSHBUG00000011156	-	83	74.046	Haplochromis_burtoni
ENSSDUG00000016624	-	84	58.333	ENSHBUG00000013269	-	98	59.818	Haplochromis_burtoni
ENSSDUG00000016624	-	50	70.233	ENSHBUG00000000157	-	76	70.531	Haplochromis_burtoni
ENSSDUG00000016624	-	53	76.955	ENSHBUG00000006928	-	64	77.561	Haplochromis_burtoni
ENSSDUG00000016624	-	54	57.915	ENSHBUG00000002999	-	73	62.439	Haplochromis_burtoni
ENSSDUG00000016624	-	63	40.074	ENSIPUG00000004131	-	75	41.784	Ictalurus_punctatus
ENSSDUG00000016624	-	82	34.139	ENSIPUG00000004161	-	70	36.261	Ictalurus_punctatus
ENSSDUG00000016624	-	83	44.406	ENSKMAG00000010293	-	95	44.064	Kryptolebias_marmoratus
ENSSDUG00000016624	-	78	56.882	ENSKMAG00000010851	-	94	56.760	Kryptolebias_marmoratus
ENSSDUG00000016624	-	61	68.896	ENSLBEG00000010625	-	95	68.998	Labrus_bergylta
ENSSDUG00000016624	-	57	66.887	ENSLBEG00000028623	-	90	69.217	Labrus_bergylta
ENSSDUG00000016624	-	67	68.447	ENSLBEG00000022878	-	99	68.447	Labrus_bergylta
ENSSDUG00000016624	-	68	67.373	ENSLBEG00000012647	-	91	68.567	Labrus_bergylta
ENSSDUG00000016624	-	54	45.106	ENSLBEG00000008506	-	65	45.854	Labrus_bergylta
ENSSDUG00000016624	-	54	70.213	ENSLBEG00000017021	-	95	70.213	Labrus_bergylta
ENSSDUG00000016624	-	72	49.309	ENSMAMG00000017884	-	91	46.094	Mastacembelus_armatus
ENSSDUG00000016624	-	72	66.809	ENSMAMG00000018162	si:ch211-229i14.2	97	67.105	Mastacembelus_armatus
ENSSDUG00000016624	-	55	53.704	ENSMAMG00000017892	-	72	58.095	Mastacembelus_armatus
ENSSDUG00000016624	-	70	57.418	ENSMAMG00000018061	-	94	55.907	Mastacembelus_armatus
ENSSDUG00000016624	-	81	44.972	ENSMAMG00000017849	-	97	42.075	Mastacembelus_armatus
ENSSDUG00000016624	-	81	60.629	ENSMAMG00000018175	-	98	59.245	Mastacembelus_armatus
ENSSDUG00000016624	-	81	67.500	ENSMAMG00000018170	-	99	67.143	Mastacembelus_armatus
ENSSDUG00000016624	-	76	42.316	ENSMAMG00000017906	-	51	56.944	Mastacembelus_armatus
ENSSDUG00000016624	-	55	49.735	ENSMZEG00005027841	-	90	52.291	Maylandia_zebra
ENSSDUG00000016624	-	60	50.489	ENSMZEG00005021732	-	64	60.386	Maylandia_zebra
ENSSDUG00000016624	-	54	73.585	ENSMZEG00005014235	-	90	73.585	Maylandia_zebra
ENSSDUG00000016624	-	64	44.703	ENSMZEG00005028364	-	93	43.432	Maylandia_zebra
ENSSDUG00000016624	-	56	65.428	ENSMZEG00005002051	-	92	64.312	Maylandia_zebra
ENSSDUG00000016624	-	55	59.701	ENSMZEG00005021723	-	80	51.568	Maylandia_zebra
ENSSDUG00000016624	-	51	57.082	ENSMZEG00005021721	-	74	57.005	Maylandia_zebra
ENSSDUG00000016624	-	51	53.070	ENSMMOG00000010425	-	82	55.825	Mola_mola
ENSSDUG00000016624	-	69	54.910	ENSMALG00000004282	-	92	53.804	Monopterus_albus
ENSSDUG00000016624	-	75	58.673	ENSMALG00000001082	-	99	46.162	Monopterus_albus
ENSSDUG00000016624	-	56	58.736	ENSNBRG00000014905	-	88	58.333	Neolamprologus_brichardi
ENSSDUG00000016624	-	54	56.107	ENSNBRG00000019119	-	74	53.237	Neolamprologus_brichardi
ENSSDUG00000016624	-	51	57.534	ENSNBRG00000019143	-	78	59.024	Neolamprologus_brichardi
ENSSDUG00000016624	-	73	63.252	ENSNBRG00000003245	-	89	58.206	Neolamprologus_brichardi
ENSSDUG00000016624	-	82	42.509	ENSNBRG00000014894	-	93	39.106	Neolamprologus_brichardi
ENSSDUG00000016624	-	54	66.667	ENSNBRG00000003060	-	68	73.810	Neolamprologus_brichardi
ENSSDUG00000016624	-	75	48.886	ENSONIG00000004482	-	99	48.947	Oreochromis_niloticus
ENSSDUG00000016624	-	56	67.763	ENSONIG00000000314	-	94	66.083	Oreochromis_niloticus
ENSSDUG00000016624	-	56	58.691	ENSONIG00000014210	-	96	53.947	Oreochromis_niloticus
ENSSDUG00000016624	-	75	54.938	ENSONIG00000010736	-	99	54.568	Oreochromis_niloticus
ENSSDUG00000016624	-	52	59.563	ENSONIG00000013819	-	95	59.563	Oreochromis_niloticus
ENSSDUG00000016624	-	72	58.537	ENSONIG00000013863	-	91	59.946	Oreochromis_niloticus
ENSSDUG00000016624	-	73	59.346	ENSONIG00000011313	-	93	61.615	Oreochromis_niloticus
ENSSDUG00000016624	-	59	66.828	ENSONIG00000012315	-	98	65.204	Oreochromis_niloticus
ENSSDUG00000016624	-	72	58.194	ENSONIG00000000233	-	97	58.300	Oreochromis_niloticus
ENSSDUG00000016624	-	59	61.197	ENSORLG00000025924	si:ch211-229i14.2	98	51.136	Oryzias_latipes
ENSSDUG00000016624	-	76	48.084	ENSORLG00000017091	-	94	46.759	Oryzias_latipes
ENSSDUG00000016624	-	79	48.474	ENSORLG00000030459	-	93	48.831	Oryzias_latipes
ENSSDUG00000016624	-	78	48.712	ENSORLG00020014225	-	98	46.333	Oryzias_latipes_hni
ENSSDUG00000016624	-	76	47.291	ENSORLG00020016100	-	94	46.021	Oryzias_latipes_hni
ENSSDUG00000016624	-	76	48.084	ENSORLG00015006787	-	94	45.012	Oryzias_latipes_hsok
ENSSDUG00000016624	-	67	56.528	ENSORLG00015004505	-	93	51.881	Oryzias_latipes_hsok
ENSSDUG00000016624	-	52	57.993	ENSORLG00015004298	-	52	58.555	Oryzias_latipes_hsok
ENSSDUG00000016624	-	81	45.930	ENSOMEG00000003632	-	95	44.444	Oryzias_melastigma
ENSSDUG00000016624	-	78	47.317	ENSOMEG00000009393	-	94	47.317	Oryzias_melastigma
ENSSDUG00000016624	-	72	57.467	ENSOMEG00000013595	-	64	58.016	Oryzias_melastigma
ENSSDUG00000016624	-	87	50.879	ENSOMEG00000007494	-	97	51.299	Oryzias_melastigma
ENSSDUG00000016624	-	55	53.704	ENSPMGG00000002488	-	88	58.049	Periophthalmus_magnuspinnatus
ENSSDUG00000016624	-	84	43.688	ENSPFOG00000000973	-	98	42.645	Poecilia_formosa
ENSSDUG00000016624	-	53	46.341	ENSPFOG00000000259	-	99	46.341	Poecilia_formosa
ENSSDUG00000016624	-	81	51.986	ENSPFOG00000024835	-	96	50.935	Poecilia_formosa
ENSSDUG00000016624	-	74	60.000	ENSPFOG00000022293	-	99	58.448	Poecilia_formosa
ENSSDUG00000016624	-	56	52.570	ENSPFOG00000000217	-	96	53.752	Poecilia_formosa
ENSSDUG00000016624	-	73	51.465	ENSPFOG00000001388	-	99	50.631	Poecilia_formosa
ENSSDUG00000016624	-	78	54.446	ENSPLAG00000015541	-	97	49.828	Poecilia_latipinna
ENSSDUG00000016624	-	78	57.674	ENSPMEG00000008599	-	98	56.704	Poecilia_mexicana
ENSSDUG00000016624	-	78	55.488	ENSPMEG00000002123	-	90	55.366	Poecilia_mexicana
ENSSDUG00000016624	-	55	67.636	ENSPMEG00000009705	-	93	67.636	Poecilia_mexicana
ENSSDUG00000016624	-	78	53.715	ENSPMEG00000003917	-	98	52.503	Poecilia_mexicana
ENSSDUG00000016624	-	84	44.978	ENSPMEG00000010900	-	98	41.424	Poecilia_mexicana
ENSSDUG00000016624	-	54	63.668	ENSPREG00000016826	-	85	58.663	Poecilia_reticulata
ENSSDUG00000016624	-	78	54.390	ENSPREG00000017114	-	98	53.380	Poecilia_reticulata
ENSSDUG00000016624	-	65	55.496	ENSPREG00000006470	-	94	52.344	Poecilia_reticulata
ENSSDUG00000016624	-	58	54.902	ENSPREG00000018694	-	98	59.524	Poecilia_reticulata
ENSSDUG00000016624	-	99	58.006	ENSPREG00000017086	-	91	54.379	Poecilia_reticulata
ENSSDUG00000016624	-	78	54.177	ENSPREG00000017000	-	98	53.580	Poecilia_reticulata
ENSSDUG00000016624	-	65	63.988	ENSPNYG00000004195	-	99	63.542	Pundamilia_nyererei
ENSSDUG00000016624	-	83	57.294	ENSPNYG00000006913	-	100	55.239	Pundamilia_nyererei
ENSSDUG00000016624	-	53	71.595	ENSPNYG00000023994	-	93	71.595	Pundamilia_nyererei
ENSSDUG00000016624	-	85	44.123	ENSPNYG00000008493	-	96	42.376	Pundamilia_nyererei
ENSSDUG00000016624	-	66	59.452	ENSPNYG00000003568	-	98	55.479	Pundamilia_nyererei
ENSSDUG00000016624	-	55	66.135	ENSPNYG00000019890	-	78	65.700	Pundamilia_nyererei
ENSSDUG00000016624	-	82	62.854	ENSPNYG00000000712	-	100	62.382	Pundamilia_nyererei
ENSSDUG00000016624	-	56	54.444	ENSPNYG00000008579	-	84	49.635	Pundamilia_nyererei
ENSSDUG00000016624	-	79	53.924	ENSPNYG00000008570	-	88	51.176	Pundamilia_nyererei
ENSSDUG00000016624	-	58	50.586	ENSPNYG00000008507	-	97	50.097	Pundamilia_nyererei
ENSSDUG00000016624	-	53	50.000	ENSPNAG00000003225	-	64	57.767	Pygocentrus_nattereri
ENSSDUG00000016624	-	62	41.772	ENSPNAG00000026011	-	62	36.491	Pygocentrus_nattereri
ENSSDUG00000016624	-	69	39.511	ENSPNAG00000003364	si:ch211-229i14.2	99	34.455	Pygocentrus_nattereri
ENSSDUG00000016624	-	54	69.574	ENSSMAG00000016994	-	90	69.574	Scophthalmus_maximus
ENSSDUG00000016624	-	54	76.377	ENSSLDG00000011692	-	99	77.495	Seriola_lalandi_dorsalis
ENSSDUG00000016624	-	61	83.784	ENSSLDG00000007022	-	90	83.784	Seriola_lalandi_dorsalis
ENSSDUG00000016624	-	56	60.870	ENSSLDG00000004233	-	73	64.078	Seriola_lalandi_dorsalis
ENSSDUG00000016624	-	62	52.802	ENSSLDG00000013126	-	95	52.507	Seriola_lalandi_dorsalis
ENSSDUG00000016624	-	56	57.246	ENSSLDG00000004473	-	97	56.884	Seriola_lalandi_dorsalis
ENSSDUG00000016624	-	59	62.757	ENSSLDG00000002339	-	98	62.525	Seriola_lalandi_dorsalis
ENSSDUG00000016624	-	82	46.824	ENSSLDG00000001533	-	96	44.964	Seriola_lalandi_dorsalis
ENSSDUG00000016624	-	55	57.854	ENSSLDG00000001606	-	80	61.215	Seriola_lalandi_dorsalis
ENSSDUG00000016624	-	53	57.430	ENSSPAG00000001365	-	75	57.561	Stegastes_partitus
ENSSDUG00000016624	-	78	66.093	ENSSPAG00000005977	-	100	65.233	Stegastes_partitus
ENSSDUG00000016624	-	87	44.757	ENSSPAG00000001386	-	97	43.483	Stegastes_partitus
ENSSDUG00000016624	-	85	37.349	ENSTRUG00000025882	-	94	36.473	Takifugu_rubripes
ENSSDUG00000016624	-	87	40.761	ENSTRUG00000020623	-	97	38.907	Takifugu_rubripes
ENSSDUG00000016624	-	53	56.897	ENSXCOG00000018711	-	72	58.537	Xiphophorus_couchianus
ENSSDUG00000016624	-	84	42.176	ENSXMAG00000019889	-	98	39.928	Xiphophorus_maculatus
ENSSDUG00000016624	-	81	53.041	ENSXMAG00000027923	-	99	52.756	Xiphophorus_maculatus