EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000016626 (Gene tree)
Gene ID: 111239027
Gene Symbol: parp1
Alias: si:dkey-206f10.3|wu:fc60f12|zgc:110092
Full Name: poly(ADP-ribose) polymerase 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 12264 bases
Position: chrBDQW01000025.1:12951818-12964081
Accession: 111239027
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000022913	PARP	PF00644.20	6.9e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000023330	-	4143	XM_022768795	ENSSDUP00000022913	1014 (aa)	XP_022624516	UPI000BBE456B

Gene Model

Click here to download ENSSDUG00000016626's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03410	Base excision repair	KEGG
sdu04210	Apoptosis	KEGG
sdu04217	Necroptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000016626's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000016626	parp1	100	70.127	ENSG00000143799	PARP1	100	70.127	Homo_sapiens
ENSSDUG00000016626	parp1	100	93.688	ENSAPOG00000006414	parp1	100	93.688	Acanthochromis_polyacanthus
ENSSDUG00000016626	parp1	99	68.959	ENSAMEG00000014451	PARP1	100	69.161	Ailuropoda_melanoleuca
ENSSDUG00000016626	parp1	100	92.801	ENSACIG00000005651	parp1	100	92.801	Amphilophus_citrinellus
ENSSDUG00000016626	parp1	100	94.576	ENSAOCG00000021005	parp1	100	94.576	Amphiprion_ocellaris
ENSSDUG00000016626	parp1	100	94.576	ENSAPEG00000004784	parp1	100	94.576	Amphiprion_percula
ENSSDUG00000016626	parp1	100	93.097	ENSATEG00000010457	parp1	100	93.097	Anabas_testudineus
ENSSDUG00000016626	parp1	87	73.333	ENSAPLG00000014039	PARP1	99	73.333	Anas_platyrhynchos
ENSSDUG00000016626	parp1	100	72.102	ENSACAG00000006189	PARP1	100	72.299	Anolis_carolinensis
ENSSDUG00000016626	parp1	100	70.049	ENSANAG00000032699	PARP1	100	70.215	Aotus_nancymaae
ENSSDUG00000016626	parp1	100	92.801	ENSACLG00000015489	parp1	100	92.801	Astatotilapia_calliptera
ENSSDUG00000016626	parp1	100	81.898	ENSAMXG00000006465	parp1	100	82.779	Astyanax_mexicanus
ENSSDUG00000016626	parp1	100	67.351	ENSBTAG00000000837	PARP1	100	67.840	Bos_taurus
ENSSDUG00000016626	parp1	87	43.750	WBGene00004049	parp-1	100	46.183	Caenorhabditis_elegans
ENSSDUG00000016626	parp1	100	69.268	ENSCJAG00000012831	PARP1	100	69.434	Callithrix_jacchus
ENSSDUG00000016626	parp1	96	68.200	ENSCAFG00000016089	PARP1	100	68.814	Canis_familiaris
ENSSDUG00000016626	parp1	100	69.246	ENSCAFG00020001660	PARP1	100	69.442	Canis_lupus_dingo
ENSSDUG00000016626	parp1	100	67.875	ENSCHIG00000018072	PARP1	100	68.231	Capra_hircus
ENSSDUG00000016626	parp1	99	70.748	ENSTSYG00000003699	PARP1	100	70.748	Carlito_syrichta
ENSSDUG00000016626	parp1	99	58.130	ENSCAPG00000011113	-	99	58.061	Cavia_aperea
ENSSDUG00000016626	parp1	100	69.569	ENSCPOG00000015643	-	100	69.569	Cavia_porcellus
ENSSDUG00000016626	parp1	100	70.225	ENSCCAG00000033484	PARP1	100	70.225	Cebus_capucinus
ENSSDUG00000016626	parp1	100	69.833	ENSCATG00000038981	PARP1	100	69.833	Cercocebus_atys
ENSSDUG00000016626	parp1	99	69.428	ENSCLAG00000006637	PARP1	99	69.428	Chinchilla_lanigera
ENSSDUG00000016626	parp1	66	75.781	ENSCHOG00000003539	PARP1	66	75.781	Choloepus_hoffmanni
ENSSDUG00000016626	parp1	99	73.202	ENSCPBG00000011958	PARP1	99	73.202	Chrysemys_picta_bellii
ENSSDUG00000016626	parp1	99	69.184	ENSCANG00000041340	PARP1	100	69.184	Colobus_angolensis_palliatus
ENSSDUG00000016626	parp1	100	69.510	ENSCGRG00001020559	Parp1	100	69.608	Cricetulus_griseus_chok1gshd
ENSSDUG00000016626	parp1	99	69.254	ENSCGRG00000004864	Parp1	100	69.356	Cricetulus_griseus_crigri
ENSSDUG00000016626	parp1	100	92.169	ENSCSEG00000020665	parp1	100	92.169	Cynoglossus_semilaevis
ENSSDUG00000016626	parp1	99	90.082	ENSCVAG00000021372	parp1	99	90.082	Cyprinodon_variegatus
ENSSDUG00000016626	parp1	100	84.381	ENSDARG00000019529	parp1	100	83.776	Danio_rerio
ENSSDUG00000016626	parp1	99	68.373	ENSDNOG00000012059	PARP1	100	69.089	Dasypus_novemcinctus
ENSSDUG00000016626	parp1	99	67.824	ENSDORG00000005234	Parp1	100	68.539	Dipodomys_ordii
ENSSDUG00000016626	parp1	99	41.240	FBgn0010247	Parp	99	40.846	Drosophila_melanogaster
ENSSDUG00000016626	parp1	87	76.562	ENSETEG00000013254	PARP1	88	76.562	Echinops_telfairi
ENSSDUG00000016626	parp1	97	59.446	ENSEBUG00000005820	parp1	100	59.419	Eptatretus_burgeri
ENSSDUG00000016626	parp1	98	69.192	ENSEASG00005013275	PARP1	99	70.090	Equus_asinus_asinus
ENSSDUG00000016626	parp1	100	69.246	ENSECAG00000019207	PARP1	100	70.029	Equus_caballus
ENSSDUG00000016626	parp1	99	66.863	ENSEEUG00000012253	PARP1	99	67.091	Erinaceus_europaeus
ENSSDUG00000016626	parp1	99	85.893	ENSELUG00000017336	parp1	99	85.893	Esox_lucius
ENSSDUG00000016626	parp1	99	69.130	ENSFCAG00000005777	PARP1	100	69.697	Felis_catus
ENSSDUG00000016626	parp1	99	73.571	ENSFALG00000011578	PARP1	100	74.131	Ficedula_albicollis
ENSSDUG00000016626	parp1	99	68.437	ENSFDAG00000017662	PARP1	100	68.437	Fukomys_damarensis
ENSSDUG00000016626	parp1	100	90.837	ENSFHEG00000001117	parp1	100	90.837	Fundulus_heteroclitus
ENSSDUG00000016626	parp1	99	84.562	ENSGMOG00000014929	parp1	100	84.562	Gadus_morhua
ENSSDUG00000016626	parp1	99	74.089	ENSGALG00000009228	PARP1	99	74.630	Gallus_gallus
ENSSDUG00000016626	parp1	100	91.232	ENSGAFG00000010450	parp1	100	91.232	Gambusia_affinis
ENSSDUG00000016626	parp1	100	90.846	ENSGACG00000011280	parp1	100	90.846	Gasterosteus_aculeatus
ENSSDUG00000016626	parp1	99	72.925	ENSGAGG00000010066	PARP1	99	72.781	Gopherus_agassizii
ENSSDUG00000016626	parp1	100	69.833	ENSGGOG00000006308	PARP1	100	69.833	Gorilla_gorilla
ENSSDUG00000016626	parp1	100	93.886	ENSHBUG00000010490	parp1	100	93.886	Haplochromis_burtoni
ENSSDUG00000016626	parp1	96	68.560	ENSHGLG00000003992	PARP1	93	68.560	Heterocephalus_glaber_female
ENSSDUG00000016626	parp1	96	68.560	ENSHGLG00100016965	PARP1	93	68.560	Heterocephalus_glaber_male
ENSSDUG00000016626	parp1	100	87.353	ENSHCOG00000011619	parp1	100	88.039	Hippocampus_comes
ENSSDUG00000016626	parp1	100	82.617	ENSIPUG00000020250	parp1	100	82.910	Ictalurus_punctatus
ENSSDUG00000016626	parp1	100	70.029	ENSSTOG00000016000	PARP1	100	70.029	Ictidomys_tridecemlineatus
ENSSDUG00000016626	parp1	100	69.314	ENSJJAG00000023497	Parp1	100	70.000	Jaculus_jaculus
ENSSDUG00000016626	parp1	100	90.837	ENSKMAG00000011627	parp1	100	91.034	Kryptolebias_marmoratus
ENSSDUG00000016626	parp1	100	93.688	ENSLBEG00000013376	parp1	100	93.688	Labrus_bergylta
ENSSDUG00000016626	parp1	99	57.325	ENSLACG00000002735	PARP1	99	57.662	Latimeria_chalumnae
ENSSDUG00000016626	parp1	100	79.548	ENSLOCG00000015798	parp1	100	80.667	Lepisosteus_oculatus
ENSSDUG00000016626	parp1	99	67.551	ENSLAFG00000007830	PARP1	100	68.163	Loxodonta_africana
ENSSDUG00000016626	parp1	100	69.736	ENSMFAG00000002526	PARP1	100	69.736	Macaca_fascicularis
ENSSDUG00000016626	parp1	100	69.833	ENSMMUG00000021820	PARP1	100	69.833	Macaca_mulatta
ENSSDUG00000016626	parp1	100	69.736	ENSMNEG00000034074	PARP1	100	69.736	Macaca_nemestrina
ENSSDUG00000016626	parp1	100	67.969	ENSMLEG00000012344	PARP1	100	67.969	Mandrillus_leucophaeus
ENSSDUG00000016626	parp1	100	93.688	ENSMAMG00000020652	parp1	100	93.688	Mastacembelus_armatus
ENSSDUG00000016626	parp1	100	94.181	ENSMZEG00005016907	parp1	100	94.181	Maylandia_zebra
ENSSDUG00000016626	parp1	99	73.900	ENSMGAG00000007760	PARP1	100	74.207	Meleagris_gallopavo
ENSSDUG00000016626	parp1	100	69.412	ENSMAUG00000008306	Parp1	100	69.510	Mesocricetus_auratus
ENSSDUG00000016626	parp1	100	67.189	ENSMICG00000017076	PARP1	100	67.189	Microcebus_murinus
ENSSDUG00000016626	parp1	100	69.608	ENSMOCG00000014315	Parp1	100	69.706	Microtus_ochrogaster
ENSSDUG00000016626	parp1	100	91.658	ENSMMOG00000015966	parp1	100	91.658	Mola_mola
ENSSDUG00000016626	parp1	100	70.000	ENSMODG00000006076	PARP1	100	70.392	Monodelphis_domestica
ENSSDUG00000016626	parp1	100	89.744	ENSMALG00000004057	parp1	100	89.744	Monopterus_albus
ENSSDUG00000016626	parp1	100	69.344	MGP_CAROLIEiJ_G0014978	Parp1	100	76.531	Mus_caroli
ENSSDUG00000016626	parp1	100	69.238	ENSMUSG00000026496	Parp1	99	76.531	Mus_musculus
ENSSDUG00000016626	parp1	100	69.238	MGP_SPRETEiJ_G0015777	Parp1	100	76.531	Mus_spretus
ENSSDUG00000016626	parp1	100	69.833	ENSMPUG00000004585	PARP1	100	70.029	Mustela_putorius_furo
ENSSDUG00000016626	parp1	76	76.512	ENSMLUG00000012285	PARP1	85	76.512	Myotis_lucifugus
ENSSDUG00000016626	parp1	99	69.132	ENSNGAG00000003885	Parp1	99	69.527	Nannospalax_galili
ENSSDUG00000016626	parp1	100	92.505	ENSNBRG00000017434	parp1	100	92.505	Neolamprologus_brichardi
ENSSDUG00000016626	parp1	95	74.936	ENSNLEG00000013905	PARP1	100	74.936	Nomascus_leucogenys
ENSSDUG00000016626	parp1	67	78.806	ENSMEUG00000007720	PARP1	87	78.806	Notamacropus_eugenii
ENSSDUG00000016626	parp1	100	70.772	ENSOPRG00000011722	PARP1	100	71.359	Ochotona_princeps
ENSSDUG00000016626	parp1	100	68.725	ENSODEG00000007424	PARP1	100	68.982	Octodon_degus
ENSSDUG00000016626	parp1	100	93.491	ENSONIG00000013486	parp1	100	93.491	Oreochromis_niloticus
ENSSDUG00000016626	parp1	99	71.502	ENSOANG00000001488	PARP1	100	71.910	Ornithorhynchus_anatinus
ENSSDUG00000016626	parp1	100	69.892	ENSOCUG00000017820	PARP1	100	70.772	Oryctolagus_cuniculus
ENSSDUG00000016626	parp1	100	89.360	ENSORLG00000013691	parp1	100	89.360	Oryzias_latipes
ENSSDUG00000016626	parp1	99	89.206	ENSORLG00020001074	parp1	99	89.206	Oryzias_latipes_hni
ENSSDUG00000016626	parp1	100	89.360	ENSORLG00015007090	parp1	100	89.360	Oryzias_latipes_hsok
ENSSDUG00000016626	parp1	100	70.323	ENSOGAG00000016206	PARP1	100	70.323	Otolemur_garnettii
ENSSDUG00000016626	parp1	100	67.644	ENSOARG00000000811	PARP1	100	68.426	Ovis_aries
ENSSDUG00000016626	parp1	100	69.736	ENSPPAG00000040862	PARP1	100	69.736	Pan_paniscus
ENSSDUG00000016626	parp1	96	68.635	ENSPPRG00000003528	PARP1	100	69.207	Panthera_pardus
ENSSDUG00000016626	parp1	93	58.447	ENSPTIG00000009102	PARP1	98	58.342	Panthera_tigris_altaica
ENSSDUG00000016626	parp1	100	69.736	ENSPTRG00000002049	PARP1	100	69.736	Pan_troglodytes
ENSSDUG00000016626	parp1	100	69.863	ENSPANG00000011198	PARP1	100	69.863	Papio_anubis
ENSSDUG00000016626	parp1	100	82.283	ENSPKIG00000006039	parp1	100	82.677	Paramormyrops_kingsleyae
ENSSDUG00000016626	parp1	99	71.458	ENSPSIG00000016374	PARP1	100	71.865	Pelodiscus_sinensis
ENSSDUG00000016626	parp1	100	85.167	ENSPMGG00000008936	parp1	100	85.167	Periophthalmus_magnuspinnatus
ENSSDUG00000016626	parp1	100	69.667	ENSPEMG00000020230	Parp1	100	69.667	Peromyscus_maniculatus_bairdii
ENSSDUG00000016626	parp1	99	70.443	ENSPCIG00000006436	PARP1	99	71.133	Phascolarctos_cinereus
ENSSDUG00000016626	parp1	100	89.655	ENSPFOG00000002342	parp1	100	89.655	Poecilia_formosa
ENSSDUG00000016626	parp1	100	91.034	ENSPLAG00000000909	parp1	100	91.034	Poecilia_latipinna
ENSSDUG00000016626	parp1	100	91.626	ENSPMEG00000013979	parp1	100	91.626	Poecilia_mexicana
ENSSDUG00000016626	parp1	100	91.034	ENSPREG00000001114	parp1	100	91.034	Poecilia_reticulata
ENSSDUG00000016626	parp1	99	69.325	ENSPPYG00000000164	PARP1	100	69.325	Pongo_abelii
ENSSDUG00000016626	parp1	60	77.160	ENSPCAG00000005558	-	59	77.160	Procavia_capensis
ENSSDUG00000016626	parp1	100	69.638	ENSPCOG00000016918	PARP1	100	70.049	Propithecus_coquereli
ENSSDUG00000016626	parp1	92	80.488	ENSPVAG00000005543	PARP1	86	80.488	Pteropus_vampyrus
ENSSDUG00000016626	parp1	100	92.801	ENSPNYG00000009702	parp1	100	92.801	Pundamilia_nyererei
ENSSDUG00000016626	parp1	100	84.638	ENSPNAG00000002787	parp1	100	85.323	Pygocentrus_nattereri
ENSSDUG00000016626	parp1	100	69.148	ENSRNOG00000003084	Parp1	100	69.246	Rattus_norvegicus
ENSSDUG00000016626	parp1	100	69.736	ENSRBIG00000044893	PARP1	99	70.874	Rhinopithecus_bieti
ENSSDUG00000016626	parp1	99	51.629	ENSRROG00000040615	-	97	58.442	Rhinopithecus_roxellana
ENSSDUG00000016626	parp1	100	69.736	ENSRROG00000029280	PARP1	99	70.874	Rhinopithecus_roxellana
ENSSDUG00000016626	parp1	100	69.638	ENSSBOG00000010144	PARP1	100	70.323	Saimiri_boliviensis_boliviensis
ENSSDUG00000016626	parp1	99	70.041	ENSSHAG00000001991	PARP1	100	70.961	Sarcophilus_harrisii
ENSSDUG00000016626	parp1	100	82.104	ENSSFOG00015020017	parp1	100	82.104	Scleropages_formosus
ENSSDUG00000016626	parp1	100	94.083	ENSSMAG00000013799	parp1	100	94.083	Scophthalmus_maximus
ENSSDUG00000016626	parp1	100	99.704	ENSSLDG00000006384	parp1	100	99.704	Seriola_lalandi_dorsalis
ENSSDUG00000016626	parp1	53	76.620	ENSSARG00000009436	-	59	76.620	Sorex_araneus
ENSSDUG00000016626	parp1	100	69.027	ENSSPUG00000007790	PARP1	100	69.518	Sphenodon_punctatus
ENSSDUG00000016626	parp1	100	90.335	ENSSPAG00000019074	parp1	100	94.080	Stegastes_partitus
ENSSDUG00000016626	parp1	100	69.472	ENSSSCG00000023660	PARP1	100	70.059	Sus_scrofa
ENSSDUG00000016626	parp1	98	72.818	ENSTGUG00000004260	-	100	73.090	Taeniopygia_guttata
ENSSDUG00000016626	parp1	100	87.870	ENSTRUG00000014490	parp1	100	87.870	Takifugu_rubripes
ENSSDUG00000016626	parp1	100	87.182	ENSTNIG00000016384	parp1	100	87.182	Tetraodon_nigroviridis
ENSSDUG00000016626	parp1	89	64.211	ENSTBEG00000002364	PARP1	92	64.211	Tupaia_belangeri
ENSSDUG00000016626	parp1	100	64.418	ENSTTRG00000000188	PARP1	100	65.200	Tursiops_truncatus
ENSSDUG00000016626	parp1	99	69.521	ENSUAMG00000014388	PARP1	100	69.725	Ursus_americanus
ENSSDUG00000016626	parp1	96	62.589	ENSUMAG00000014555	PARP1	99	62.702	Ursus_maritimus
ENSSDUG00000016626	parp1	83	76.863	ENSVPAG00000011411	PARP1	83	76.863	Vicugna_pacos
ENSSDUG00000016626	parp1	96	68.098	ENSVVUG00000001655	PARP1	100	68.635	Vulpes_vulpes
ENSSDUG00000016626	parp1	98	70.600	ENSXETG00000022610	parp1	99	70.559	Xenopus_tropicalis
ENSSDUG00000016626	parp1	100	90.837	ENSXMAG00000003632	parp1	100	90.837	Xiphophorus_maculatus