EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000016682 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: FA complementation group M
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 35448 bases
Position: chrBDQW01000149.1:9547095-9582542
Accession: 111225867
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000023056	ResIII	PF04851.15	2e-18	1	1
ENSSDUP00000023037	ResIII	PF04851.15	6.4e-18	1	1
ENSSDUP00000022982	ResIII	PF04851.15	1.9e-17	1	1
ENSSDUP00000023037	DEAD	PF00270.29	1.4e-20	1	1
ENSSDUP00000023056	DEAD	PF00270.29	2e-20	1	1
ENSSDUP00000022982	DEAD	PF00270.29	1.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000023458	-	1902	-	ENSSDUP00000023037	633 (aa)	-	-
ENSSDUT00000023481	-	1083	-	ENSSDUP00000023056	360 (aa)	-	-
ENSSDUT00000023400	-	4859	XM_022750906	ENSSDUP00000022982	1539 (aa)	XP_022606627	-

Gene Model

Click here to download ENSSDUG00000016682's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000016682's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000016682	-	95	62.519	ENSG00000187790	FANCM	96	62.481	Homo_sapiens
ENSSDUG00000016682	-	97	74.186	ENSAPOG00000014274	-	97	84.332	Acanthochromis_polyacanthus
ENSSDUG00000016682	-	96	85.110	ENSACIG00000005444	-	95	85.942	Amphilophus_citrinellus
ENSSDUG00000016682	-	74	87.547	ENSAOCG00000005964	-	100	87.591	Amphiprion_ocellaris
ENSSDUG00000016682	-	74	87.925	ENSAPEG00000018344	-	100	87.956	Amphiprion_percula
ENSSDUG00000016682	-	98	79.778	ENSATEG00000012412	-	72	74.165	Anabas_testudineus
ENSSDUG00000016682	-	98	77.901	ENSACLG00000016008	-	71	69.904	Astatotilapia_calliptera
ENSSDUG00000016682	-	92	74.874	ENSAMXG00000020275	-	81	45.922	Astyanax_mexicanus
ENSSDUG00000016682	-	98	61.456	ENSBTAG00000002612	FANCM	98	61.186	Bos_taurus
ENSSDUG00000016682	-	94	64.163	ENSCAFG00020022069	-	96	63.323	Canis_lupus_dingo
ENSSDUG00000016682	-	88	66.899	ENSTSYG00000036497	-	85	67.254	Carlito_syrichta
ENSSDUG00000016682	-	95	62.712	ENSCCAG00000026593	FANCM	50	48.423	Cebus_capucinus
ENSSDUG00000016682	-	97	60.837	ENSCPBG00000015089	FANCM	65	41.842	Chrysemys_picta_bellii
ENSSDUG00000016682	-	73	61.217	ENSCING00000002994	-	99	60.741	Ciona_intestinalis
ENSSDUG00000016682	-	91	88.124	ENSCSEG00000002313	-	71	61.682	Cynoglossus_semilaevis
ENSSDUG00000016682	-	93	83.811	ENSCVAG00000015579	-	69	60.000	Cyprinodon_variegatus
ENSSDUG00000016682	-	80	71.181	ENSDARG00000112136	CABZ01079748.1	95	71.181	Danio_rerio
ENSSDUG00000016682	-	82	57.317	ENSEBUG00000014849	-	86	57.317	Eptatretus_burgeri
ENSSDUG00000016682	-	95	64.557	ENSEASG00005007781	FANCM	96	65.378	Equus_asinus_asinus
ENSSDUG00000016682	-	92	78.608	ENSELUG00000015761	-	70	54.996	Esox_lucius
ENSSDUG00000016682	-	95	63.456	ENSFCAG00000022146	-	96	62.963	Felis_catus
ENSSDUG00000016682	-	94	80.290	ENSFHEG00000006371	-	95	76.862	Fundulus_heteroclitus
ENSSDUG00000016682	-	95	78.583	ENSGMOG00000002019	-	68	66.477	Gadus_morhua
ENSSDUG00000016682	-	74	84.644	ENSGAFG00000002104	-	100	84.783	Gambusia_affinis
ENSSDUG00000016682	-	96	84.726	ENSGACG00000009448	-	69	58.865	Gasterosteus_aculeatus
ENSSDUG00000016682	-	85	54.740	ENSGAGG00000007068	-	85	57.187	Gopherus_agassizii
ENSSDUG00000016682	-	98	77.901	ENSHBUG00000007085	-	72	68.580	Haplochromis_burtoni
ENSSDUG00000016682	-	94	79.769	ENSHCOG00000013769	-	95	77.302	Hippocampus_comes
ENSSDUG00000016682	-	93	74.457	ENSIPUG00000014629	fancm	88	63.271	Ictalurus_punctatus
ENSSDUG00000016682	-	95	71.635	ENSKMAG00000009391	-	99	79.665	Kryptolebias_marmoratus
ENSSDUG00000016682	-	91	88.601	ENSLBEG00000004982	-	93	67.032	Labrus_bergylta
ENSSDUG00000016682	-	97	63.664	ENSLACG00000007739	FANCM	70	39.149	Latimeria_chalumnae
ENSSDUG00000016682	-	90	77.342	ENSLOCG00000011318	FANCM	73	47.397	Lepisosteus_oculatus
ENSSDUG00000016682	-	95	61.738	ENSLAFG00000001136	FANCM	50	49.227	Loxodonta_africana
ENSSDUG00000016682	-	98	78.267	ENSMAMG00000007087	-	71	71.913	Mastacembelus_armatus
ENSSDUG00000016682	-	98	78.177	ENSMZEG00005004644	-	71	69.904	Maylandia_zebra
ENSSDUG00000016682	-	95	63.303	ENSMICG00000005811	FANCM	55	48.696	Microcebus_murinus
ENSSDUG00000016682	-	87	90.235	ENSMMOG00000010215	-	70	65.172	Mola_mola
ENSSDUG00000016682	-	97	73.995	ENSMALG00000013187	-	96	86.747	Monopterus_albus
ENSSDUG00000016682	-	97	61.178	MGP_CAROLIEiJ_G0017791	Fancm	50	47.610	Mus_caroli
ENSSDUG00000016682	-	98	61.145	ENSMUSG00000055884	Fancm	95	63.333	Mus_musculus
ENSSDUG00000016682	-	97	59.084	MGP_PahariEiJ_G0029547	Fancm	50	44.991	Mus_pahari
ENSSDUG00000016682	-	97	61.868	MGP_SPRETEiJ_G0018636	Fancm	50	47.615	Mus_spretus
ENSSDUG00000016682	-	74	84.906	ENSNBRG00000024095	-	100	85.185	Neolamprologus_brichardi
ENSSDUG00000016682	-	96	84.885	ENSONIG00000003531	-	71	69.955	Oreochromis_niloticus
ENSSDUG00000016682	-	95	63.902	ENSOCUG00000007539	FANCM	50	49.360	Oryctolagus_cuniculus
ENSSDUG00000016682	-	91	89.880	ENSORLG00000014503	-	70	60.452	Oryzias_latipes
ENSSDUG00000016682	-	91	90.223	ENSORLG00020013516	-	70	60.232	Oryzias_latipes_hni
ENSSDUG00000016682	-	91	90.051	ENSORLG00015012100	-	70	59.910	Oryzias_latipes_hsok
ENSSDUG00000016682	-	98	78.378	ENSOMEG00000010717	-	68	58.908	Oryzias_melastigma
ENSSDUG00000016682	-	95	63.359	ENSPPRG00000011952	-	96	63.020	Panthera_pardus
ENSSDUG00000016682	-	95	63.359	ENSPTIG00000018621	-	96	63.790	Panthera_tigris_altaica
ENSSDUG00000016682	-	94	64.500	ENSPKIG00000000861	-	92	66.587	Paramormyrops_kingsleyae
ENSSDUG00000016682	-	74	85.714	ENSPMGG00000010830	-	100	85.978	Periophthalmus_magnuspinnatus
ENSSDUG00000016682	-	67	52.941	ENSPMAG00000003340	-	100	53.676	Petromyzon_marinus
ENSSDUG00000016682	-	88	65.331	ENSPCIG00000005354	-	95	61.381	Phascolarctos_cinereus
ENSSDUG00000016682	-	91	85.430	ENSPFOG00000002008	-	55	81.361	Poecilia_formosa
ENSSDUG00000016682	-	91	88.679	ENSPLAG00000014164	-	66	66.313	Poecilia_latipinna
ENSSDUG00000016682	-	91	88.679	ENSPMEG00000010746	-	67	66.558	Poecilia_mexicana
ENSSDUG00000016682	-	91	88.336	ENSPREG00000019849	-	70	59.935	Poecilia_reticulata
ENSSDUG00000016682	-	74	84.528	ENSPNYG00000018775	-	100	84.815	Pundamilia_nyererei
ENSSDUG00000016682	-	90	70.548	ENSPNAG00000013558	-	69	47.459	Pygocentrus_nattereri
ENSSDUG00000016682	-	93	63.174	ENSRNOG00000056721	Fancm	97	46.965	Rattus_norvegicus
ENSSDUG00000016682	-	87	32.848	YIR002C	-	63	32.067	Saccharomyces_cerevisiae
ENSSDUG00000016682	-	86	66.726	ENSSHAG00000000507	FANCM	54	47.437	Sarcophilus_harrisii
ENSSDUG00000016682	-	73	76.894	ENSSFOG00015017948	-	99	76.580	Scleropages_formosus
ENSSDUG00000016682	-	91	91.453	ENSSMAG00000019903	-	99	85.507	Scophthalmus_maximus
ENSSDUG00000016682	-	99	97.150	ENSSLDG00000003408	-	72	97.150	Seriola_lalandi_dorsalis
ENSSDUG00000016682	-	82	85.374	ENSSPAG00000016930	-	97	82.258	Stegastes_partitus
ENSSDUG00000016682	-	95	61.667	ENSSSCG00000005000	FANCM	50	48.521	Sus_scrofa
ENSSDUG00000016682	-	89	63.823	ENSTGUG00000013226	-	100	57.666	Taeniopygia_guttata
ENSSDUG00000016682	-	95	83.703	ENSTRUG00000009756	-	96	84.244	Takifugu_rubripes
ENSSDUG00000016682	-	96	82.923	ENSTNIG00000017277	-	69	57.336	Tetraodon_nigroviridis
ENSSDUG00000016682	-	94	64.678	ENSUMAG00000007704	-	94	64.207	Ursus_maritimus
ENSSDUG00000016682	-	93	67.552	ENSXETG00000003046	fancm	99	62.971	Xenopus_tropicalis
ENSSDUG00000016682	-	82	79.866	ENSXCOG00000004854	-	91	83.521	Xiphophorus_couchianus
ENSSDUG00000016682	-	91	87.993	ENSXMAG00000007702	-	70	60.337	Xiphophorus_maculatus