EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000016711 (Gene tree)
Gene ID: 111230707
Gene Symbol: -
Alias: -
Full Name: helicase ARIP4-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 85009 bases
Position: chrBDQW01000283.1:843440-928448
Accession: 111230707
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000023014	ResIII	PF04851.15	1.2e-07	1	1
ENSSDUP00000022985	ResIII	PF04851.15	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000023403	-	9821	-	ENSSDUP00000022985	1506 (aa)	-	-
ENSSDUT00000023432	-	10024	XM_022757529	ENSSDUP00000023014	1479 (aa)	XP_022613250	-

Gene Model

Click here to download ENSSDUG00000016711's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000016711's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000016711	-	97	60.451	ENSSDUG00000014268	rad54l2	95	60.040

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000016711	-	91	60.699	ENSG00000164080	RAD54L2	87	65.935	Homo_sapiens
ENSSDUG00000016711	-	100	85.101	ENSAPOG00000024141	-	100	85.013	Acanthochromis_polyacanthus
ENSSDUG00000016711	-	91	60.584	ENSAMEG00000009326	RAD54L2	84	64.206	Ailuropoda_melanoleuca
ENSSDUG00000016711	-	85	64.561	ENSACIG00000018079	rad54l2	91	63.706	Amphilophus_citrinellus
ENSSDUG00000016711	-	94	80.775	ENSACIG00000015932	-	100	80.877	Amphilophus_citrinellus
ENSSDUG00000016711	-	100	85.570	ENSAOCG00000022380	-	100	84.946	Amphiprion_ocellaris
ENSSDUG00000016711	-	97	61.672	ENSATEG00000009346	rad54l2	95	61.382	Anabas_testudineus
ENSSDUG00000016711	-	100	86.796	ENSATEG00000006641	-	100	87.332	Anabas_testudineus
ENSSDUG00000016711	-	95	62.110	ENSAPLG00000002121	RAD54L2	93	62.995	Anas_platyrhynchos
ENSSDUG00000016711	-	79	68.478	ENSACAG00000015883	RAD54L2	87	68.305	Anolis_carolinensis
ENSSDUG00000016711	-	91	60.299	ENSANAG00000025396	RAD54L2	88	60.931	Aotus_nancymaae
ENSSDUG00000016711	-	97	60.160	ENSACLG00000019111	rad54l2	93	61.176	Astatotilapia_calliptera
ENSSDUG00000016711	-	100	83.747	ENSACLG00000018296	-	100	83.747	Astatotilapia_calliptera
ENSSDUG00000016711	-	94	61.783	ENSAMXG00000013807	rad54l2	97	59.577	Astyanax_mexicanus
ENSSDUG00000016711	-	91	60.528	ENSBTAG00000032253	RAD54L2	89	61.017	Bos_taurus
ENSSDUG00000016711	-	91	60.470	ENSCJAG00000005575	RAD54L2	89	64.155	Callithrix_jacchus
ENSSDUG00000016711	-	91	60.442	ENSCAFG00000010120	RAD54L2	84	64.172	Canis_familiaris
ENSSDUG00000016711	-	91	60.442	ENSCAFG00020022320	RAD54L2	88	61.362	Canis_lupus_dingo
ENSSDUG00000016711	-	91	60.457	ENSCHIG00000008830	RAD54L2	88	61.317	Capra_hircus
ENSSDUG00000016711	-	91	60.157	ENSTSYG00000013200	RAD54L2	88	60.886	Carlito_syrichta
ENSSDUG00000016711	-	78	68.795	ENSCAPG00000016465	RAD54L2	79	61.798	Cavia_aperea
ENSSDUG00000016711	-	93	59.416	ENSCPOG00000005941	RAD54L2	84	63.860	Cavia_porcellus
ENSSDUG00000016711	-	79	59.656	ENSCCAG00000024465	RAD54L2	81	63.729	Cebus_capucinus
ENSSDUG00000016711	-	91	60.472	ENSCATG00000039891	RAD54L2	85	63.895	Cercocebus_atys
ENSSDUG00000016711	-	93	59.349	ENSCLAG00000008059	RAD54L2	91	59.957	Chinchilla_lanigera
ENSSDUG00000016711	-	91	60.556	ENSCSAG00000014027	RAD54L2	84	64.178	Chlorocebus_sabaeus
ENSSDUG00000016711	-	96	61.976	ENSCPBG00000016624	RAD54L2	97	61.321	Chrysemys_picta_bellii
ENSSDUG00000016711	-	69	49.952	ENSCING00000009208	-	95	49.953	Ciona_intestinalis
ENSSDUG00000016711	-	91	60.699	ENSCANG00000036093	RAD54L2	85	64.257	Colobus_angolensis_palliatus
ENSSDUG00000016711	-	93	59.704	ENSCGRG00000007921	Rad54l2	90	60.261	Cricetulus_griseus_crigri
ENSSDUG00000016711	-	87	81.721	ENSCSEG00000006115	-	99	82.267	Cynoglossus_semilaevis
ENSSDUG00000016711	-	96	58.713	ENSCSEG00000001740	rad54l2	96	58.082	Cynoglossus_semilaevis
ENSSDUG00000016711	-	100	79.078	ENSCVAG00000005376	-	100	78.275	Cyprinodon_variegatus
ENSSDUG00000016711	-	94	61.582	ENSCVAG00000017887	rad54l2	93	60.960	Cyprinodon_variegatus
ENSSDUG00000016711	-	96	62.855	ENSDARG00000063031	rad54l2	95	63.604	Danio_rerio
ENSSDUG00000016711	-	94	59.334	ENSDNOG00000017359	RAD54L2	86	63.752	Dasypus_novemcinctus
ENSSDUG00000016711	-	75	70.705	ENSDORG00000000651	Rad54l2	83	68.825	Dipodomys_ordii
ENSSDUG00000016711	-	58	58.962	FBgn0034976	CG4049	63	50.893	Drosophila_melanogaster
ENSSDUG00000016711	-	90	59.856	ENSETEG00000013290	RAD54L2	94	60.489	Echinops_telfairi
ENSSDUG00000016711	-	70	57.934	ENSEBUG00000001591	rad54l2	73	61.284	Eptatretus_burgeri
ENSSDUG00000016711	-	91	60.628	ENSEASG00005012868	RAD54L2	88	61.226	Equus_asinus_asinus
ENSSDUG00000016711	-	91	60.485	ENSECAG00000014759	RAD54L2	84	64.098	Equus_caballus
ENSSDUG00000016711	-	79	69.434	ENSEEUG00000001759	RAD54L2	83	69.434	Erinaceus_europaeus
ENSSDUG00000016711	-	97	71.133	ENSELUG00000011246	RAD54L2	97	71.299	Esox_lucius
ENSSDUG00000016711	-	91	60.584	ENSFCAG00000018563	RAD54L2	91	60.086	Felis_catus
ENSSDUG00000016711	-	80	67.583	ENSFALG00000008938	RAD54L2	91	67.745	Ficedula_albicollis
ENSSDUG00000016711	-	93	59.306	ENSFDAG00000017084	RAD54L2	91	59.986	Fukomys_damarensis
ENSSDUG00000016711	-	94	61.828	ENSFHEG00000023241	rad54l2	95	59.839	Fundulus_heteroclitus
ENSSDUG00000016711	-	98	79.688	ENSFHEG00000017845	-	99	78.997	Fundulus_heteroclitus
ENSSDUG00000016711	-	94	61.012	ENSGMOG00000010674	rad54l2	97	61.981	Gadus_morhua
ENSSDUG00000016711	-	95	61.576	ENSGALG00000003243	RAD54L2	94	60.407	Gallus_gallus
ENSSDUG00000016711	-	94	61.994	ENSGAFG00000021535	rad54l2	95	59.812	Gambusia_affinis
ENSSDUG00000016711	-	98	78.976	ENSGAFG00000002396	-	99	78.940	Gambusia_affinis
ENSSDUG00000016711	-	87	81.614	ENSGACG00000005642	-	100	80.915	Gasterosteus_aculeatus
ENSSDUG00000016711	-	94	61.064	ENSGACG00000001558	rad54l2	96	61.572	Gasterosteus_aculeatus
ENSSDUG00000016711	-	91	63.343	ENSGAGG00000020971	RAD54L2	92	63.589	Gopherus_agassizii
ENSSDUG00000016711	-	91	60.628	ENSGGOG00000010032	RAD54L2	85	64.178	Gorilla_gorilla
ENSSDUG00000016711	-	97	60.227	ENSHBUG00000012480	rad54l2	96	60.127	Haplochromis_burtoni
ENSSDUG00000016711	-	100	84.016	ENSHBUG00000018930	-	100	83.882	Haplochromis_burtoni
ENSSDUG00000016711	-	93	59.306	ENSHGLG00000012116	RAD54L2	91	60.129	Heterocephalus_glaber_female
ENSSDUG00000016711	-	93	59.306	ENSHGLG00100007205	RAD54L2	91	60.129	Heterocephalus_glaber_male
ENSSDUG00000016711	-	99	75.506	ENSHCOG00000006741	-	97	76.187	Hippocampus_comes
ENSSDUG00000016711	-	97	59.346	ENSHCOG00000007601	rad54l2	94	59.097	Hippocampus_comes
ENSSDUG00000016711	-	93	60.430	ENSIPUG00000024973	-	95	59.782	Ictalurus_punctatus
ENSSDUG00000016711	-	94	60.412	ENSIPUG00000019664	rad54l2	95	58.511	Ictalurus_punctatus
ENSSDUG00000016711	-	92	59.416	ENSSTOG00000010014	RAD54L2	92	59.174	Ictidomys_tridecemlineatus
ENSSDUG00000016711	-	91	60.628	ENSJJAG00000014332	Rad54l2	84	64.098	Jaculus_jaculus
ENSSDUG00000016711	-	99	80.450	ENSKMAG00000002931	-	98	80.123	Kryptolebias_marmoratus
ENSSDUG00000016711	-	97	59.960	ENSKMAG00000001976	rad54l2	94	61.132	Kryptolebias_marmoratus
ENSSDUG00000016711	-	94	61.717	ENSLBEG00000018779	rad54l2	94	60.191	Labrus_bergylta
ENSSDUG00000016711	-	87	83.333	ENSLBEG00000008534	-	100	82.868	Labrus_bergylta
ENSSDUG00000016711	-	91	59.415	ENSLACG00000016004	RAD54L2	96	57.808	Latimeria_chalumnae
ENSSDUG00000016711	-	72	73.767	ENSLOCG00000014222	rad54l2	99	74.047	Lepisosteus_oculatus
ENSSDUG00000016711	-	89	60.329	ENSLAFG00000005966	RAD54L2	88	61.185	Loxodonta_africana
ENSSDUG00000016711	-	91	60.556	ENSMFAG00000041836	RAD54L2	85	64.178	Macaca_fascicularis
ENSSDUG00000016711	-	91	60.414	ENSMMUG00000012002	RAD54L2	84	64.019	Macaca_mulatta
ENSSDUG00000016711	-	91	60.556	ENSMNEG00000035063	RAD54L2	86	64.257	Macaca_nemestrina
ENSSDUG00000016711	-	91	60.556	ENSMLEG00000034668	RAD54L2	85	64.257	Mandrillus_leucophaeus
ENSSDUG00000016711	-	100	85.111	ENSMAMG00000015321	-	100	84.775	Mastacembelus_armatus
ENSSDUG00000016711	-	97	60.119	ENSMAMG00000023761	rad54l2	96	59.226	Mastacembelus_armatus
ENSSDUG00000016711	-	97	60.200	ENSMZEG00005012584	rad54l2	96	59.972	Maylandia_zebra
ENSSDUG00000016711	-	100	83.680	ENSMZEG00005021308	-	100	83.680	Maylandia_zebra
ENSSDUG00000016711	-	95	61.720	ENSMGAG00000002911	RAD54L2	90	62.062	Meleagris_gallopavo
ENSSDUG00000016711	-	71	69.390	ENSMAUG00000011651	Rad54l2	91	70.640	Mesocricetus_auratus
ENSSDUG00000016711	-	98	57.770	ENSMICG00000002777	RAD54L2	86	64.098	Microcebus_murinus
ENSSDUG00000016711	-	94	59.094	ENSMOCG00000022448	Rad54l2	85	63.831	Microtus_ochrogaster
ENSSDUG00000016711	-	94	60.876	ENSMMOG00000021709	rad54l2	92	61.947	Mola_mola
ENSSDUG00000016711	-	94	81.987	ENSMMOG00000016901	-	99	81.630	Mola_mola
ENSSDUG00000016711	-	90	63.067	ENSMODG00000011850	RAD54L2	96	62.293	Monodelphis_domestica
ENSSDUG00000016711	-	87	82.756	ENSMALG00000015084	-	97	88.351	Monopterus_albus
ENSSDUG00000016711	-	95	58.271	MGP_CAROLIEiJ_G0032634	Rad54l2	88	60.680	Mus_caroli
ENSSDUG00000016711	-	93	59.236	ENSMUSG00000040661	Rad54l2	88	60.754	Mus_musculus
ENSSDUG00000016711	-	93	59.141	MGP_PahariEiJ_G0015502	Rad54l2	88	60.648	Mus_pahari
ENSSDUG00000016711	-	95	58.339	MGP_SPRETEiJ_G0033779	Rad54l2	88	60.754	Mus_spretus
ENSSDUG00000016711	-	94	59.446	ENSMPUG00000011865	RAD54L2	84	63.860	Mustela_putorius_furo
ENSSDUG00000016711	-	91	60.673	ENSMLUG00000004605	RAD54L2	88	61.091	Myotis_lucifugus
ENSSDUG00000016711	-	93	59.694	ENSNGAG00000015629	Rad54l2	88	61.448	Nannospalax_galili
ENSSDUG00000016711	-	100	84.218	ENSNBRG00000022847	-	100	84.083	Neolamprologus_brichardi
ENSSDUG00000016711	-	94	60.506	ENSNBRG00000001937	rad54l2	98	62.322	Neolamprologus_brichardi
ENSSDUG00000016711	-	91	60.628	ENSNLEG00000007038	RAD54L2	85	64.178	Nomascus_leucogenys
ENSSDUG00000016711	-	90	75.780	ENSMEUG00000009835	RAD54L2	92	74.499	Notamacropus_eugenii
ENSSDUG00000016711	-	93	59.223	ENSODEG00000018266	RAD54L2	91	59.900	Octodon_degus
ENSSDUG00000016711	-	100	82.234	ENSONIG00000001663	-	98	83.986	Oreochromis_niloticus
ENSSDUG00000016711	-	97	61.350	ENSONIG00000014468	rad54l2	96	60.852	Oreochromis_niloticus
ENSSDUG00000016711	-	95	61.846	ENSOANG00000012793	RAD54L2	97	60.982	Ornithorhynchus_anatinus
ENSSDUG00000016711	-	94	59.364	ENSOCUG00000017577	RAD54L2	84	64.206	Oryctolagus_cuniculus
ENSSDUG00000016711	-	86	70.860	ENSORLG00000002276	rad54l2	95	59.529	Oryzias_latipes
ENSSDUG00000016711	-	99	77.487	ENSORLG00000002714	-	99	77.135	Oryzias_latipes
ENSSDUG00000016711	-	99	77.285	ENSORLG00020019256	-	99	77.001	Oryzias_latipes_hni
ENSSDUG00000016711	-	96	59.149	ENSORLG00020003470	rad54l2	96	59.415	Oryzias_latipes_hni
ENSSDUG00000016711	-	99	77.536	ENSORLG00015013408	-	99	77.151	Oryzias_latipes_hsok
ENSSDUG00000016711	-	96	59.821	ENSORLG00015021530	rad54l2	95	59.498	Oryzias_latipes_hsok
ENSSDUG00000016711	-	99	76.514	ENSOMEG00000008216	-	99	76.294	Oryzias_melastigma
ENSSDUG00000016711	-	96	60.393	ENSOMEG00000005597	rad54l2	94	59.717	Oryzias_melastigma
ENSSDUG00000016711	-	76	60.629	ENSOGAG00000012442	RAD54L2	88	65.082	Otolemur_garnettii
ENSSDUG00000016711	-	91	60.528	ENSOARG00000007264	RAD54L2	88	61.317	Ovis_aries
ENSSDUG00000016711	-	91	60.628	ENSPPAG00000038472	RAD54L2	85	64.178	Pan_paniscus
ENSSDUG00000016711	-	91	60.584	ENSPPRG00000010212	RAD54L2	91	60.086	Panthera_pardus
ENSSDUG00000016711	-	91	60.584	ENSPTIG00000002240	RAD54L2	84	64.048	Panthera_tigris_altaica
ENSSDUG00000016711	-	91	60.628	ENSPTRG00000014974	RAD54L2	85	64.178	Pan_troglodytes
ENSSDUG00000016711	-	91	60.556	ENSPANG00000000857	RAD54L2	85	64.178	Papio_anubis
ENSSDUG00000016711	-	100	66.044	ENSPKIG00000001065	rad54l2	97	66.989	Paramormyrops_kingsleyae
ENSSDUG00000016711	-	69	72.115	ENSPSIG00000014346	RAD54L2	96	69.069	Pelodiscus_sinensis
ENSSDUG00000016711	-	96	70.851	ENSPMGG00000000641	-	99	68.900	Periophthalmus_magnuspinnatus
ENSSDUG00000016711	-	86	60.970	ENSPMGG00000002208	rad54l2	96	62.551	Periophthalmus_magnuspinnatus
ENSSDUG00000016711	-	93	59.540	ENSPEMG00000012051	Rad54l2	84	63.701	Peromyscus_maniculatus_bairdii
ENSSDUG00000016711	-	90	61.611	ENSPCIG00000018143	RAD54L2	92	64.184	Phascolarctos_cinereus
ENSSDUG00000016711	-	94	62.115	ENSPFOG00000018644	rad54l2	96	59.906	Poecilia_formosa
ENSSDUG00000016711	-	98	80.286	ENSPFOG00000000197	-	100	79.732	Poecilia_formosa
ENSSDUG00000016711	-	94	62.045	ENSPLAG00000006015	rad54l2	94	60.181	Poecilia_latipinna
ENSSDUG00000016711	-	98	80.164	ENSPLAG00000013908	-	100	79.544	Poecilia_latipinna
ENSSDUG00000016711	-	98	80.423	ENSPMEG00000009878	-	100	79.530	Poecilia_mexicana
ENSSDUG00000016711	-	94	62.255	ENSPMEG00000021535	rad54l2	96	60.040	Poecilia_mexicana
ENSSDUG00000016711	-	94	61.327	ENSPREG00000008628	rad54l2	97	62.224	Poecilia_reticulata
ENSSDUG00000016711	-	98	80.014	ENSPREG00000013377	RAD54L2	100	79.477	Poecilia_reticulata
ENSSDUG00000016711	-	91	60.699	ENSPPYG00000013831	RAD54L2	91	61.374	Pongo_abelii
ENSSDUG00000016711	-	73	61.240	ENSPCAG00000011952	RAD54L2	79	61.240	Procavia_capensis
ENSSDUG00000016711	-	97	57.867	ENSPCOG00000015983	RAD54L2	84	63.708	Propithecus_coquereli
ENSSDUG00000016711	-	100	83.949	ENSPNYG00000011435	-	100	83.949	Pundamilia_nyererei
ENSSDUG00000016711	-	94	60.524	ENSPNYG00000020693	rad54l2	96	59.830	Pundamilia_nyererei
ENSSDUG00000016711	-	94	61.603	ENSPNAG00000006451	rad54l2	97	60.924	Pygocentrus_nattereri
ENSSDUG00000016711	-	100	64.561	ENSPNAG00000011583	-	97	65.377	Pygocentrus_nattereri
ENSSDUG00000016711	-	93	56.458	ENSRNOG00000013570	Rad54l2	91	56.734	Rattus_norvegicus
ENSSDUG00000016711	-	69	67.723	ENSRNOG00000049489	LOC102552166	91	68.948	Rattus_norvegicus
ENSSDUG00000016711	-	91	60.699	ENSRBIG00000032434	RAD54L2	90	65.568	Rhinopithecus_bieti
ENSSDUG00000016711	-	91	60.699	ENSRROG00000042309	RAD54L2	85	64.257	Rhinopithecus_roxellana
ENSSDUG00000016711	-	94	59.544	ENSSBOG00000002139	RAD54L2	84	64.019	Saimiri_boliviensis_boliviensis
ENSSDUG00000016711	-	95	60.971	ENSSHAG00000008604	RAD54L2	93	61.823	Sarcophilus_harrisii
ENSSDUG00000016711	-	100	67.530	ENSSFOG00015019014	rad54l2	97	68.370	Scleropages_formosus
ENSSDUG00000016711	-	96	58.367	ENSSMAG00000020933	rad54l2	95	58.578	Scophthalmus_maximus
ENSSDUG00000016711	-	100	85.069	ENSSMAG00000009978	-	99	84.305	Scophthalmus_maximus
ENSSDUG00000016711	-	96	95.435	ENSSLDG00000023388	-	100	95.435	Seriola_lalandi_dorsalis
ENSSDUG00000016711	-	94	61.958	ENSSLDG00000023959	rad54l2	97	62.419	Seriola_lalandi_dorsalis
ENSSDUG00000016711	-	97	60.276	ENSSPAG00000016532	rad54l2	96	60.680	Stegastes_partitus
ENSSDUG00000016711	-	94	85.196	ENSSPAG00000006371	-	100	85.175	Stegastes_partitus
ENSSDUG00000016711	-	95	59.094	ENSSSCG00000011425	RAD54L2	88	61.255	Sus_scrofa
ENSSDUG00000016711	-	95	61.692	ENSTGUG00000004888	RAD54L2	90	62.876	Taeniopygia_guttata
ENSSDUG00000016711	-	94	60.598	ENSTRUG00000013962	rad54l2	91	60.368	Takifugu_rubripes
ENSSDUG00000016711	-	100	76.933	ENSTRUG00000011066	-	100	77.001	Takifugu_rubripes
ENSSDUG00000016711	-	73	70.871	ENSTNIG00000014694	rad54l2	99	68.186	Tetraodon_nigroviridis
ENSSDUG00000016711	-	75	79.533	ENSTNIG00000006049	-	98	80.346	Tetraodon_nigroviridis
ENSSDUG00000016711	-	85	59.555	ENSTBEG00000003377	RAD54L2	87	63.425	Tupaia_belangeri
ENSSDUG00000016711	-	91	60.513	ENSUAMG00000020891	RAD54L2	87	64.154	Ursus_americanus
ENSSDUG00000016711	-	91	60.385	ENSUMAG00000021678	RAD54L2	79	70.428	Ursus_maritimus
ENSSDUG00000016711	-	91	60.442	ENSVVUG00000026874	RAD54L2	87	64.172	Vulpes_vulpes
ENSSDUG00000016711	-	95	60.669	ENSXETG00000000070	rad54l2	87	64.878	Xenopus_tropicalis
ENSSDUG00000016711	-	94	57.958	ENSXCOG00000004961	rad54l2	98	59.024	Xiphophorus_couchianus
ENSSDUG00000016711	-	95	75.444	ENSXCOG00000002848	-	99	75.087	Xiphophorus_couchianus
ENSSDUG00000016711	-	94	61.442	ENSXMAG00000017182	rad54l2	97	62.216	Xiphophorus_maculatus
ENSSDUG00000016711	-	98	80.205	ENSXMAG00000019370	-	100	80.054	Xiphophorus_maculatus