EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000016758 (Gene tree)
Gene ID: 111220973
Gene Symbol: gars (1 of many)
Alias: metronome|mrn|si:dkey-276i5.1|wu:fb02f03
Full Name: glycine--tRNA ligase-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 7211 bases
Position: chrBDQW01000079.1:2641049-2648259
Accession: 111220973
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000023089	HGTP_anticodon	PF03129.20	2.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000023514	-	1848	XM_022744283	ENSSDUP00000023089	615 (aa)	XP_022600004	-

Gene Model

Click here to download ENSSDUG00000016758's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000016758's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000016758	gars	100	75.811	ENSSDUG00000016795	gars	90	75.811

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000016758	gars	99	71.196	ENSG00000106105	GARS	95	72.603	Homo_sapiens
ENSSDUG00000016758	gars	100	76.991	ENSAPOG00000020089	gars	99	76.991	Acanthochromis_polyacanthus
ENSSDUG00000016758	gars	100	75.516	ENSAPOG00000019999	gars	90	75.516	Acanthochromis_polyacanthus
ENSSDUG00000016758	gars	99	72.969	ENSAMEG00000006652	GARS	92	72.969	Ailuropoda_melanoleuca
ENSSDUG00000016758	gars	100	75.221	ENSACIG00000020744	gars	90	75.221	Amphilophus_citrinellus
ENSSDUG00000016758	gars	100	78.171	ENSACIG00000020797	gars	99	78.171	Amphilophus_citrinellus
ENSSDUG00000016758	gars	68	90.887	ENSAOCG00000002479	gars	81	90.887	Amphiprion_ocellaris
ENSSDUG00000016758	gars	100	75.516	ENSAOCG00000009108	gars	90	75.516	Amphiprion_ocellaris
ENSSDUG00000016758	gars	100	78.171	ENSAPEG00000018903	gars	99	78.171	Amphiprion_percula
ENSSDUG00000016758	gars	100	75.221	ENSAPEG00000018850	gars	90	75.221	Amphiprion_percula
ENSSDUG00000016758	gars	100	75.073	ENSATEG00000008784	gars	99	75.190	Anabas_testudineus
ENSSDUG00000016758	gars	66	67.811	ENSAPLG00000015638	-	100	67.811	Anas_platyrhynchos
ENSSDUG00000016758	gars	99	71.344	ENSACAG00000005601	GARS	98	71.344	Anolis_carolinensis
ENSSDUG00000016758	gars	99	71.935	ENSANAG00000022536	GARS	99	71.935	Aotus_nancymaae
ENSSDUG00000016758	gars	100	74.926	ENSACLG00000027174	gars	90	74.926	Astatotilapia_calliptera
ENSSDUG00000016758	gars	100	77.581	ENSACLG00000027158	gars	99	77.581	Astatotilapia_calliptera
ENSSDUG00000016758	gars	100	68.437	ENSAMXG00000014895	gars	95	74.622	Astyanax_mexicanus
ENSSDUG00000016758	gars	99	72.083	ENSBTAG00000018972	GARS	91	72.083	Bos_taurus
ENSSDUG00000016758	gars	99	47.781	WBGene00001744	gars-1	99	47.781	Caenorhabditis_elegans
ENSSDUG00000016758	gars	99	72.083	ENSCJAG00000008595	GARS	93	71.935	Callithrix_jacchus
ENSSDUG00000016758	gars	99	72.485	ENSCAFG00000003086	GARS	85	72.633	Canis_familiaris
ENSSDUG00000016758	gars	99	72.337	ENSCAFG00020004272	GARS	97	72.337	Canis_lupus_dingo
ENSSDUG00000016758	gars	99	71.492	ENSCHIG00000016912	GARS	99	71.824	Capra_hircus
ENSSDUG00000016758	gars	99	72.674	ENSTSYG00000008538	GARS	91	72.674	Carlito_syrichta
ENSSDUG00000016758	gars	91	64.076	ENSCAPG00000007526	GARS	99	64.076	Cavia_aperea
ENSSDUG00000016758	gars	98	71.364	ENSCPOG00000007547	GARS	92	71.514	Cavia_porcellus
ENSSDUG00000016758	gars	99	72.230	ENSCCAG00000011512	GARS	91	72.230	Cebus_capucinus
ENSSDUG00000016758	gars	99	71.935	ENSCATG00000036699	GARS	91	71.935	Cercocebus_atys
ENSSDUG00000016758	gars	99	71.787	ENSCLAG00000007985	GARS	95	71.787	Chinchilla_lanigera
ENSSDUG00000016758	gars	99	71.935	ENSCSAG00000014588	GARS	91	71.935	Chlorocebus_sabaeus
ENSSDUG00000016758	gars	99	69.906	ENSCHOG00000003253	GARS	91	69.906	Choloepus_hoffmanni
ENSSDUG00000016758	gars	98	72.414	ENSCPBG00000019482	GARS	91	72.414	Chrysemys_picta_bellii
ENSSDUG00000016758	gars	99	54.613	ENSCING00000008937	-	99	54.613	Ciona_intestinalis
ENSSDUG00000016758	gars	99	71.787	ENSCANG00000027727	GARS	91	71.787	Colobus_angolensis_palliatus
ENSSDUG00000016758	gars	99	72.230	ENSCGRG00001020450	Gars	93	72.083	Cricetulus_griseus_chok1gshd
ENSSDUG00000016758	gars	98	72.440	ENSCGRG00000008342	Gars	94	72.440	Cricetulus_griseus_crigri
ENSSDUG00000016758	gars	100	75.221	ENSCSEG00000017671	gars	90	75.221	Cynoglossus_semilaevis
ENSSDUG00000016758	gars	100	83.699	ENSCSEG00000017654	gars	98	83.699	Cynoglossus_semilaevis
ENSSDUG00000016758	gars	100	75.664	ENSCVAG00000007149	gars	90	75.664	Cyprinodon_variegatus
ENSSDUG00000016758	gars	100	75.369	ENSDARG00000059070	gars	98	75.369	Danio_rerio
ENSSDUG00000016758	gars	99	72.083	ENSDNOG00000046478	GARS	99	72.146	Dasypus_novemcinctus
ENSSDUG00000016758	gars	99	71.344	ENSDORG00000002672	Gars	93	71.344	Dipodomys_ordii
ENSSDUG00000016758	gars	99	51.846	FBgn0027088	GlyRS	99	51.846	Drosophila_melanogaster
ENSSDUG00000016758	gars	92	69.572	ENSETEG00000012196	GARS	98	69.572	Echinops_telfairi
ENSSDUG00000016758	gars	67	61.311	ENSEBUG00000002654	gars	86	61.311	Eptatretus_burgeri
ENSSDUG00000016758	gars	68	61.954	ENSEBUG00000002254	gars	89	61.954	Eptatretus_burgeri
ENSSDUG00000016758	gars	99	72.526	ENSEASG00005000388	GARS	91	72.526	Equus_asinus_asinus
ENSSDUG00000016758	gars	99	78.378	ENSECAG00000019373	GARS	91	78.469	Equus_caballus
ENSSDUG00000016758	gars	100	73.599	ENSELUG00000003692	gars	90	73.599	Esox_lucius
ENSSDUG00000016758	gars	99	72.821	ENSFCAG00000011415	GARS	80	72.969	Felis_catus
ENSSDUG00000016758	gars	90	71.010	ENSFALG00000006550	GARS	99	71.010	Ficedula_albicollis
ENSSDUG00000016758	gars	98	71.946	ENSFDAG00000014466	GARS	99	71.946	Fukomys_damarensis
ENSSDUG00000016758	gars	100	75.221	ENSFHEG00000013189	gars	90	75.221	Fundulus_heteroclitus
ENSSDUG00000016758	gars	90	84.795	ENSGMOG00000008856	-	88	84.795	Gadus_morhua
ENSSDUG00000016758	gars	100	73.599	ENSGMOG00000010728	gars	90	73.599	Gadus_morhua
ENSSDUG00000016758	gars	99	71.935	ENSGALG00000005694	GARS	99	71.787	Gallus_gallus
ENSSDUG00000016758	gars	100	74.336	ENSGAFG00000005228	gars	90	74.336	Gambusia_affinis
ENSSDUG00000016758	gars	100	73.894	ENSGACG00000003410	gars	90	73.894	Gasterosteus_aculeatus
ENSSDUG00000016758	gars	90	73.052	ENSGAGG00000017755	GARS	99	73.052	Gopherus_agassizii
ENSSDUG00000016758	gars	99	71.787	ENSGGOG00000004916	GARS	91	71.787	Gorilla_gorilla
ENSSDUG00000016758	gars	100	75.074	ENSHBUG00000016481	gars	90	75.074	Haplochromis_burtoni
ENSSDUG00000016758	gars	100	77.581	ENSHBUG00000000815	gars	99	77.581	Haplochromis_burtoni
ENSSDUG00000016758	gars	99	72.230	ENSHGLG00000016342	GARS	91	72.230	Heterocephalus_glaber_female
ENSSDUG00000016758	gars	99	72.083	ENSHGLG00100006787	GARS	95	72.083	Heterocephalus_glaber_male
ENSSDUG00000016758	gars	100	74.484	ENSHCOG00000005261	gars	99	74.484	Hippocampus_comes
ENSSDUG00000016758	gars	61	71.693	ENSHCOG00000005286	gars	96	71.693	Hippocampus_comes
ENSSDUG00000016758	gars	100	70.649	ENSIPUG00000011443	gars	90	70.649	Ictalurus_punctatus
ENSSDUG00000016758	gars	99	72.141	ENSSTOG00000015493	GARS	90	72.141	Ictidomys_tridecemlineatus
ENSSDUG00000016758	gars	99	71.935	ENSJJAG00000022474	Gars	97	71.935	Jaculus_jaculus
ENSSDUG00000016758	gars	100	74.336	ENSKMAG00000010428	gars	90	74.336	Kryptolebias_marmoratus
ENSSDUG00000016758	gars	63	86.154	ENSLBEG00000013122	-	100	86.154	Labrus_bergylta
ENSSDUG00000016758	gars	100	74.631	ENSLBEG00000019228	gars	90	74.631	Labrus_bergylta
ENSSDUG00000016758	gars	100	80.236	ENSLBEG00000019179	gars	100	80.236	Labrus_bergylta
ENSSDUG00000016758	gars	68	83.453	ENSLACG00000002810	GARS	80	83.453	Latimeria_chalumnae
ENSSDUG00000016758	gars	100	75.074	ENSLOCG00000009688	gars	90	75.074	Lepisosteus_oculatus
ENSSDUG00000016758	gars	99	71.935	ENSLAFG00000002496	GARS	98	71.787	Loxodonta_africana
ENSSDUG00000016758	gars	99	71.935	ENSMFAG00000038863	GARS	91	71.935	Macaca_fascicularis
ENSSDUG00000016758	gars	99	71.935	ENSMMUG00000004719	GARS	91	71.935	Macaca_mulatta
ENSSDUG00000016758	gars	99	66.174	ENSMNEG00000043203	GARS	91	66.174	Macaca_nemestrina
ENSSDUG00000016758	gars	99	72.083	ENSMLEG00000044430	GARS	91	72.083	Mandrillus_leucophaeus
ENSSDUG00000016758	gars	100	74.336	ENSMAMG00000001894	gars	98	74.398	Mastacembelus_armatus
ENSSDUG00000016758	gars	100	77.729	ENSMZEG00005019754	gars	100	77.729	Maylandia_zebra
ENSSDUG00000016758	gars	100	75.074	ENSMZEG00005019740	gars	90	75.074	Maylandia_zebra
ENSSDUG00000016758	gars	99	71.935	ENSMGAG00000003162	GARS	91	71.935	Meleagris_gallopavo
ENSSDUG00000016758	gars	99	72.230	ENSMAUG00000016852	Gars	92	72.230	Mesocricetus_auratus
ENSSDUG00000016758	gars	99	72.674	ENSMICG00000046006	GARS	99	72.674	Microcebus_murinus
ENSSDUG00000016758	gars	99	72.083	ENSMOCG00000017680	Gars	93	72.083	Microtus_ochrogaster
ENSSDUG00000016758	gars	100	73.817	ENSMMOG00000009695	gars	90	73.817	Mola_mola
ENSSDUG00000016758	gars	55	78.824	ENSMODG00000021163	-	99	78.824	Monodelphis_domestica
ENSSDUG00000016758	gars	100	73.746	ENSMALG00000006592	gars	84	73.746	Monopterus_albus
ENSSDUG00000016758	gars	99	72.674	MGP_CAROLIEiJ_G0028410	Gars	93	72.674	Mus_caroli
ENSSDUG00000016758	gars	99	72.674	ENSMUSG00000029777	Gars	93	72.674	Mus_musculus
ENSSDUG00000016758	gars	99	72.230	MGP_PahariEiJ_G0022160	Gars	93	72.230	Mus_pahari
ENSSDUG00000016758	gars	92	85.149	MGP_SPRETEiJ_G0029412	Gars	98	85.149	Mus_spretus
ENSSDUG00000016758	gars	99	73.117	ENSMPUG00000005116	GARS	91	73.117	Mustela_putorius_furo
ENSSDUG00000016758	gars	99	72.378	ENSMLUG00000002043	GARS	92	72.378	Myotis_lucifugus
ENSSDUG00000016758	gars	99	71.935	ENSNGAG00000021844	Gars	93	71.935	Nannospalax_galili
ENSSDUG00000016758	gars	100	75.221	ENSNBRG00000018585	gars	90	75.221	Neolamprologus_brichardi
ENSSDUG00000016758	gars	63	86.667	ENSNBRG00000018643	gars	100	86.667	Neolamprologus_brichardi
ENSSDUG00000016758	gars	99	72.083	ENSNLEG00000015152	GARS	91	72.083	Nomascus_leucogenys
ENSSDUG00000016758	gars	96	81.871	ENSMEUG00000001741	GARS	88	81.871	Notamacropus_eugenii
ENSSDUG00000016758	gars	86	81.633	ENSOPRG00000005342	GARS	79	81.633	Ochotona_princeps
ENSSDUG00000016758	gars	99	72.059	ENSODEG00000008246	GARS	86	72.059	Octodon_degus
ENSSDUG00000016758	gars	99	67.857	ENSOANG00000006262	GARS	91	67.857	Ornithorhynchus_anatinus
ENSSDUG00000016758	gars	99	71.640	ENSOCUG00000005295	GARS	99	71.640	Oryctolagus_cuniculus
ENSSDUG00000016758	gars	100	73.746	ENSORLG00000009470	gars	90	73.746	Oryzias_latipes
ENSSDUG00000016758	gars	94	74.143	ENSORLG00020013036	gars	99	84.010	Oryzias_latipes_hni
ENSSDUG00000016758	gars	100	74.631	ENSORLG00015012886	gars	90	74.631	Oryzias_latipes_hsok
ENSSDUG00000016758	gars	63	76.982	ENSOMEG00000000133	gars	99	76.982	Oryzias_melastigma
ENSSDUG00000016758	gars	99	71.935	ENSOGAG00000013321	GARS	91	71.935	Otolemur_garnettii
ENSSDUG00000016758	gars	99	71.492	ENSOARG00000008017	GARS	91	71.492	Ovis_aries
ENSSDUG00000016758	gars	99	71.787	ENSPPAG00000037266	GARS	92	71.787	Pan_paniscus
ENSSDUG00000016758	gars	99	72.821	ENSPPRG00000001917	GARS	91	72.821	Panthera_pardus
ENSSDUG00000016758	gars	99	72.674	ENSPTIG00000016096	GARS	99	72.674	Panthera_tigris_altaica
ENSSDUG00000016758	gars	99	71.787	ENSPTRG00000019042	GARS	91	71.787	Pan_troglodytes
ENSSDUG00000016758	gars	99	72.083	ENSPANG00000026231	GARS	91	72.083	Papio_anubis
ENSSDUG00000016758	gars	100	73.746	ENSPKIG00000014863	gars	88	73.746	Paramormyrops_kingsleyae
ENSSDUG00000016758	gars	98	72.741	ENSPSIG00000010935	GARS	99	73.290	Pelodiscus_sinensis
ENSSDUG00000016758	gars	99	71.449	ENSPMGG00000023644	gars	90	71.449	Periophthalmus_magnuspinnatus
ENSSDUG00000016758	gars	63	84.772	ENSPMGG00000023648	gars	99	84.772	Periophthalmus_magnuspinnatus
ENSSDUG00000016758	gars	98	71.795	ENSPEMG00000019930	Gars	99	71.795	Peromyscus_maniculatus_bairdii
ENSSDUG00000016758	gars	99	72.662	ENSPMAG00000006586	gars	91	72.662	Petromyzon_marinus
ENSSDUG00000016758	gars	99	69.572	ENSPCIG00000017010	GARS	89	69.719	Phascolarctos_cinereus
ENSSDUG00000016758	gars	100	74.631	ENSPFOG00000004593	gars	90	74.631	Poecilia_formosa
ENSSDUG00000016758	gars	100	74.484	ENSPLAG00000008038	gars	90	74.484	Poecilia_latipinna
ENSSDUG00000016758	gars	100	75.221	ENSPMEG00000005901	gars	90	75.221	Poecilia_mexicana
ENSSDUG00000016758	gars	100	74.779	ENSPREG00000020960	gars	88	74.779	Poecilia_reticulata
ENSSDUG00000016758	gars	99	71.344	ENSPPYG00000017673	GARS	91	71.640	Pongo_abelii
ENSSDUG00000016758	gars	99	79.856	ENSPCAG00000007199	GARS	84	79.856	Procavia_capensis
ENSSDUG00000016758	gars	99	74.347	ENSPCOG00000008887	GARS	91	74.347	Propithecus_coquereli
ENSSDUG00000016758	gars	99	72.378	ENSPVAG00000013565	GARS	91	72.378	Pteropus_vampyrus
ENSSDUG00000016758	gars	100	77.434	ENSPNYG00000004960	gars	99	77.434	Pundamilia_nyererei
ENSSDUG00000016758	gars	100	74.484	ENSPNYG00000005017	gars	90	74.484	Pundamilia_nyererei
ENSSDUG00000016758	gars	100	73.894	ENSPNAG00000020164	gars	91	73.894	Pygocentrus_nattereri
ENSSDUG00000016758	gars	99	72.378	ENSRNOG00000011052	Gars	93	72.378	Rattus_norvegicus
ENSSDUG00000016758	gars	99	70.162	ENSRBIG00000040287	GARS	91	70.310	Rhinopithecus_bieti
ENSSDUG00000016758	gars	99	71.787	ENSRROG00000044600	GARS	91	71.935	Rhinopithecus_roxellana
ENSSDUG00000016758	gars	90	45.000	YBR121C	GRS1	91	45.026	Saccharomyces_cerevisiae
ENSSDUG00000016758	gars	85	43.878	YPR081C	-	94	43.878	Saccharomyces_cerevisiae
ENSSDUG00000016758	gars	99	71.492	ENSSBOG00000022287	GARS	91	71.492	Saimiri_boliviensis_boliviensis
ENSSDUG00000016758	gars	99	71.940	ENSSHAG00000003419	GARS	98	71.940	Sarcophilus_harrisii
ENSSDUG00000016758	gars	100	74.041	ENSSFOG00015000573	gars	89	74.041	Scleropages_formosus
ENSSDUG00000016758	gars	100	75.074	ENSSMAG00000013672	gars	90	75.074	Scophthalmus_maximus
ENSSDUG00000016758	gars	99	80.502	ENSSMAG00000013709	gars	99	80.502	Scophthalmus_maximus
ENSSDUG00000016758	gars	100	75.811	ENSSLDG00000014279	gars	90	75.811	Seriola_lalandi_dorsalis
ENSSDUG00000016758	gars	100	85.988	ENSSLDG00000014238	gars	100	85.988	Seriola_lalandi_dorsalis
ENSSDUG00000016758	gars	73	72.065	ENSSARG00000008410	GARS	71	72.065	Sorex_araneus
ENSSDUG00000016758	gars	100	71.829	ENSSPUG00000001815	-	90	71.976	Sphenodon_punctatus
ENSSDUG00000016758	gars	100	76.667	ENSSPAG00000012003	gars	89	76.667	Stegastes_partitus
ENSSDUG00000016758	gars	55	92.920	ENSSPAG00000011882	gars	94	92.920	Stegastes_partitus
ENSSDUG00000016758	gars	99	72.526	ENSSSCG00000016677	GARS	91	72.526	Sus_scrofa
ENSSDUG00000016758	gars	98	69.820	ENSTGUG00000000364	GARS	99	69.820	Taeniopygia_guttata
ENSSDUG00000016758	gars	100	74.779	ENSTRUG00000017557	gars	90	74.779	Takifugu_rubripes
ENSSDUG00000016758	gars	100	74.041	ENSTNIG00000012738	gars	95	74.041	Tetraodon_nigroviridis
ENSSDUG00000016758	gars	92	83.684	ENSTBEG00000008972	GARS	75	83.684	Tupaia_belangeri
ENSSDUG00000016758	gars	98	71.429	ENSTTRG00000000334	GARS	99	71.429	Tursiops_truncatus
ENSSDUG00000016758	gars	99	73.264	ENSUAMG00000016756	GARS	91	73.264	Ursus_americanus
ENSSDUG00000016758	gars	98	73.343	ENSUMAG00000002158	GARS	99	73.290	Ursus_maritimus
ENSSDUG00000016758	gars	99	65.436	ENSVPAG00000009438	GARS	93	65.436	Vicugna_pacos
ENSSDUG00000016758	gars	99	72.485	ENSVVUG00000020981	GARS	86	72.485	Vulpes_vulpes
ENSSDUG00000016758	gars	100	70.029	ENSXETG00000018474	gars	91	70.029	Xenopus_tropicalis
ENSSDUG00000016758	gars	100	74.265	ENSXCOG00000010005	gars	90	74.265	Xiphophorus_couchianus
ENSSDUG00000016758	gars	100	74.631	ENSXMAG00000009402	gars	88	74.631	Xiphophorus_maculatus