EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000016760 (Gene tree)
Gene ID: -
Gene Symbol: rab34b
Alias: si:dkey-220h13.7
Full Name: ras-related protein Rab-34-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 5761 bases
Position: chrBDQW01000040.1:3790027-3795787
Accession: 111217170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000023058	MMR_HSR1	PF01926.23	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000023483	-	1458	XM_022738920	ENSSDUP00000023058	320 (aa)	XP_022594641	-

Gene Model

Click here to download ENSSDUG00000016760's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000016760's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000016760	rab34b	50	36.025	ENSSDUG00000004698	rab1ba	79	36.025
ENSSDUG00000016760	rab34b	58	31.383	ENSSDUG00000006618	RAB17	81	31.383
ENSSDUG00000016760	rab34b	64	36.150	ENSSDUG00000004445	zgc:171927	96	36.150
ENSSDUG00000016760	rab34b	64	34.314	ENSSDUG00000004950	rab35b	96	34.314
ENSSDUG00000016760	rab34b	50	37.267	ENSSDUG00000022535	RAB1A	78	37.267
ENSSDUG00000016760	rab34b	64	30.392	ENSSDUG00000009835	rab5aa	89	30.392
ENSSDUG00000016760	rab34b	54	32.370	ENSSDUG00000011851	rab42a	78	32.370
ENSSDUG00000016760	rab34b	52	36.527	ENSSDUG00000004551	rab14	76	36.527
ENSSDUG00000016760	rab34b	52	35.928	ENSSDUG00000013050	-	76	35.928
ENSSDUG00000016760	rab34b	52	38.323	ENSSDUG00000004633	RAB15	77	38.323
ENSSDUG00000016760	rab34b	52	34.337	ENSSDUG00000005719	si:dkey-16l2.16	95	32.195
ENSSDUG00000016760	rab34b	80	70.817	ENSSDUG00000010942	rab34a	97	70.817
ENSSDUG00000016760	rab34b	52	35.152	ENSSDUG00000013724	rab2a	76	35.152
ENSSDUG00000016760	rab34b	50	38.182	ENSSDUG00000013325	rab30	77	38.182
ENSSDUG00000016760	rab34b	50	31.875	ENSSDUG00000017131	rab22a	81	31.875
ENSSDUG00000016760	rab34b	61	30.612	ENSSDUG00000002965	rab11ba	72	30.612
ENSSDUG00000016760	rab34b	50	39.752	ENSSDUG00000013496	-	76	39.752
ENSSDUG00000016760	rab34b	50	36.646	ENSSDUG00000016888	rab1ab	72	36.646
ENSSDUG00000016760	rab34b	64	32.367	ENSSDUG00000006278	rab11al	93	32.367
ENSSDUG00000016760	rab34b	79	51.145	ENSSDUG00000004119	rab36	85	51.145
ENSSDUG00000016760	rab34b	50	35.185	ENSSDUG00000008505	rab12	65	35.404
ENSSDUG00000016760	rab34b	64	35.922	ENSSDUG00000006307	-	95	35.922
ENSSDUG00000016760	rab34b	50	30.189	ENSSDUG00000016858	-	85	30.189
ENSSDUG00000016760	rab34b	52	37.126	ENSSDUG00000005627	rab15	77	37.126
ENSSDUG00000016760	rab34b	55	36.932	ENSSDUG00000021882	rab6ba	83	36.932
ENSSDUG00000016760	rab34b	55	34.078	ENSSDUG00000019738	si:dkey-13a21.4	89	32.967
ENSSDUG00000016760	rab34b	50	37.888	ENSSDUG00000009251	rab6bb	76	37.888
ENSSDUG00000016760	rab34b	50	37.888	ENSSDUG00000018970	RAB6B	75	37.888
ENSSDUG00000016760	rab34b	60	30.729	ENSSDUG00000005960	rab18b	90	30.729

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000016760	rab34b	67	94.419	ENSAPOG00000019147	rab34b	95	82.500	Acanthochromis_polyacanthus
ENSSDUG00000016760	rab34b	80	78.906	ENSACIG00000004859	rab34b	99	78.906	Amphilophus_citrinellus
ENSSDUG00000016760	rab34b	80	88.327	ENSAOCG00000007106	rab34b	94	88.327	Amphiprion_ocellaris
ENSSDUG00000016760	rab34b	72	90.435	ENSAPEG00000018607	rab34b	85	89.076	Amphiprion_percula
ENSSDUG00000016760	rab34b	75	86.307	ENSATEG00000006851	rab34b	94	86.307	Anabas_testudineus
ENSSDUG00000016760	rab34b	80	91.797	ENSACLG00000005733	rab34b	96	91.797	Astatotilapia_calliptera
ENSSDUG00000016760	rab34b	80	71.318	ENSAMXG00000006018	rab34b	99	71.318	Astyanax_mexicanus
ENSSDUG00000016760	rab34b	73	85.169	ENSCSEG00000018133	rab34b	94	85.169	Cynoglossus_semilaevis
ENSSDUG00000016760	rab34b	79	75.591	ENSDARG00000010977	rab34b	98	75.591	Danio_rerio
ENSSDUG00000016760	rab34b	80	85.156	ENSELUG00000005597	rab34b	99	85.156	Esox_lucius
ENSSDUG00000016760	rab34b	80	88.627	ENSFHEG00000004532	rab34b	100	88.627	Fundulus_heteroclitus
ENSSDUG00000016760	rab34b	65	83.173	ENSGMOG00000007140	rab34b	100	83.173	Gadus_morhua
ENSSDUG00000016760	rab34b	80	92.188	ENSGACG00000020514	rab34b	99	92.188	Gasterosteus_aculeatus
ENSSDUG00000016760	rab34b	79	69.685	ENSIPUG00000024531	rab34	98	69.685	Ictalurus_punctatus
ENSSDUG00000016760	rab34b	80	88.235	ENSKMAG00000019341	rab34b	100	88.235	Kryptolebias_marmoratus
ENSSDUG00000016760	rab34b	80	90.196	ENSLBEG00000027819	rab34b	100	90.196	Labrus_bergylta
ENSSDUG00000016760	rab34b	80	90.588	ENSMAMG00000020214	rab34b	100	90.588	Mastacembelus_armatus
ENSSDUG00000016760	rab34b	80	85.547	ENSMMOG00000010936	rab34b	87	85.547	Mola_mola
ENSSDUG00000016760	rab34b	74	89.030	ENSMALG00000018499	rab34b	89	89.030	Monopterus_albus
ENSSDUG00000016760	rab34b	80	92.157	ENSONIG00000005519	rab34b	100	92.157	Oreochromis_niloticus
ENSSDUG00000016760	rab34b	80	86.719	ENSORLG00000003119	rab34b	92	86.719	Oryzias_latipes
ENSSDUG00000016760	rab34b	80	87.500	ENSORLG00020016139	rab34b	92	87.500	Oryzias_latipes_hni
ENSSDUG00000016760	rab34b	80	87.500	ENSORLG00015000584	rab34b	92	87.500	Oryzias_latipes_hsok
ENSSDUG00000016760	rab34b	86	84.000	ENSOMEG00000010334	rab34b	98	87.295	Oryzias_melastigma
ENSSDUG00000016760	rab34b	80	71.094	ENSPKIG00000013326	rab34b	99	71.094	Paramormyrops_kingsleyae
ENSSDUG00000016760	rab34b	80	87.109	ENSPMGG00000021697	rab34b	99	87.109	Periophthalmus_magnuspinnatus
ENSSDUG00000016760	rab34b	80	89.062	ENSPFOG00000011444	rab34b	100	89.062	Poecilia_formosa
ENSSDUG00000016760	rab34b	80	89.020	ENSPLAG00000005074	rab34b	100	89.020	Poecilia_latipinna
ENSSDUG00000016760	rab34b	80	89.020	ENSPMEG00000013297	rab34b	100	89.020	Poecilia_mexicana
ENSSDUG00000016760	rab34b	80	89.020	ENSPREG00000009813	rab34b	100	89.020	Poecilia_reticulata
ENSSDUG00000016760	rab34b	80	80.469	ENSPNYG00000017153	rab34b	99	94.350	Pundamilia_nyererei
ENSSDUG00000016760	rab34b	74	73.840	ENSPNAG00000015040	rab34b	99	73.840	Pygocentrus_nattereri
ENSSDUG00000016760	rab34b	80	71.984	ENSSFOG00015005188	rab34	99	71.984	Scleropages_formosus
ENSSDUG00000016760	rab34b	74	91.102	ENSSMAG00000019926	rab34b	100	88.186	Scophthalmus_maximus
ENSSDUG00000016760	rab34b	58	100.000	ENSSLDG00000014812	rab34b	90	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000016760	rab34b	80	90.196	ENSSPAG00000002801	rab34b	100	90.196	Stegastes_partitus
ENSSDUG00000016760	rab34b	75	87.137	ENSTRUG00000014481	rab34b	98	87.137	Takifugu_rubripes
ENSSDUG00000016760	rab34b	80	84.766	ENSTNIG00000016158	rab34b	99	84.766	Tetraodon_nigroviridis