EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000016772 (Gene tree)
Gene ID: 111229276
Gene Symbol: nol6
Alias: wu:fi43b02
Full Name: nucleolar protein 6
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 16984 bases
Position: chrBDQW01000017.1:2728376-2745359
Accession: 111229276
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000023120	Nrap	PF03813.14	3.7e-42	1	1
ENSSDUP00000023081	Nrap	PF03813.14	4e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000023544	-	4309	XM_022755545	ENSSDUP00000023120	1143 (aa)	XP_022611266	UPI000BBE0C17
ENSSDUT00000023506	-	4532	-	ENSSDUP00000023081	1210 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000016772's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000016772's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000016772	nol6	98	54.594	ENSG00000165271	NOL6	99	54.229	Homo_sapiens
ENSSDUG00000016772	nol6	100	88.908	ENSAPOG00000002135	nol6	100	88.908	Acanthochromis_polyacanthus
ENSSDUG00000016772	nol6	96	55.041	ENSAMEG00000007364	NOL6	96	54.416	Ailuropoda_melanoleuca
ENSSDUG00000016772	nol6	99	87.467	ENSACIG00000018888	nol6	99	87.379	Amphilophus_citrinellus
ENSSDUG00000016772	nol6	100	86.376	ENSAOCG00000006894	nol6	100	86.376	Amphiprion_ocellaris
ENSSDUG00000016772	nol6	83	90.326	ENSAOCG00000002591	NOL6	100	90.791	Amphiprion_ocellaris
ENSSDUG00000016772	nol6	96	88.990	ENSAPEG00000017733	nol6	99	88.899	Amphiprion_percula
ENSSDUG00000016772	nol6	95	90.129	ENSATEG00000003713	nol6	98	89.945	Anabas_testudineus
ENSSDUG00000016772	nol6	93	56.134	ENSAPLG00000003837	NOL6	100	56.134	Anas_platyrhynchos
ENSSDUG00000016772	nol6	98	57.932	ENSACAG00000012749	-	99	57.409	Anolis_carolinensis
ENSSDUG00000016772	nol6	98	54.594	ENSANAG00000019320	NOL6	99	54.505	Aotus_nancymaae
ENSSDUG00000016772	nol6	100	87.892	ENSACLG00000006141	nol6	100	87.718	Astatotilapia_calliptera
ENSSDUG00000016772	nol6	99	70.568	ENSAMXG00000007881	nol6	99	70.635	Astyanax_mexicanus
ENSSDUG00000016772	nol6	98	54.148	ENSBTAG00000003323	NOL6	97	54.059	Bos_taurus
ENSSDUG00000016772	nol6	98	53.970	ENSCJAG00000008222	NOL6	99	55.498	Callithrix_jacchus
ENSSDUG00000016772	nol6	96	55.404	ENSCAFG00000001869	NOL6	98	54.240	Canis_familiaris
ENSSDUG00000016772	nol6	96	55.163	ENSCAFG00020015767	NOL6	99	54.448	Canis_lupus_dingo
ENSSDUG00000016772	nol6	98	53.970	ENSCHIG00000011813	NOL6	97	53.880	Capra_hircus
ENSSDUG00000016772	nol6	98	54.416	ENSTSYG00000008125	NOL6	96	57.143	Carlito_syrichta
ENSSDUG00000016772	nol6	96	50.500	ENSCAPG00000011587	NOL6	97	50.409	Cavia_aperea
ENSSDUG00000016772	nol6	96	54.413	ENSCPOG00000012282	NOL6	96	54.322	Cavia_porcellus
ENSSDUG00000016772	nol6	98	54.578	ENSCCAG00000022349	NOL6	98	54.489	Cebus_capucinus
ENSSDUG00000016772	nol6	98	54.059	ENSCATG00000031690	NOL6	97	53.970	Cercocebus_atys
ENSSDUG00000016772	nol6	86	56.111	ENSCLAG00000002096	NOL6	96	56.111	Chinchilla_lanigera
ENSSDUG00000016772	nol6	99	53.764	ENSCSAG00000009990	NOL6	99	53.017	Chlorocebus_sabaeus
ENSSDUG00000016772	nol6	99	58.922	ENSCPBG00000005864	NOL6	98	58.657	Chrysemys_picta_bellii
ENSSDUG00000016772	nol6	95	35.455	ENSCSAVG00000003332	-	99	35.364	Ciona_savignyi
ENSSDUG00000016772	nol6	98	53.970	ENSCANG00000017993	NOL6	97	53.880	Colobus_angolensis_palliatus
ENSSDUG00000016772	nol6	99	53.540	ENSCGRG00001020245	Nol6	99	53.451	Cricetulus_griseus_chok1gshd
ENSSDUG00000016772	nol6	91	55.263	ENSCGRG00000014588	Nol6	98	55.263	Cricetulus_griseus_crigri
ENSSDUG00000016772	nol6	98	85.510	ENSCVAG00000019497	nol6	99	84.527	Cyprinodon_variegatus
ENSSDUG00000016772	nol6	99	69.792	ENSDARG00000059711	nol6	99	69.444	Danio_rerio
ENSSDUG00000016772	nol6	96	50.497	ENSDNOG00000003382	NOL6	95	50.497	Dasypus_novemcinctus
ENSSDUG00000016772	nol6	99	53.799	ENSDORG00000006018	Nol6	98	53.710	Dipodomys_ordii
ENSSDUG00000016772	nol6	93	31.380	FBgn0261286	Mat89Ba	88	31.470	Drosophila_melanogaster
ENSSDUG00000016772	nol6	79	55.118	ENSETEG00000003875	NOL6	79	55.118	Echinops_telfairi
ENSSDUG00000016772	nol6	82	39.100	ENSEBUG00000005711	nol6	81	46.324	Eptatretus_burgeri
ENSSDUG00000016772	nol6	96	54.991	ENSEASG00005004206	NOL6	97	54.326	Equus_asinus_asinus
ENSSDUG00000016772	nol6	96	54.991	ENSECAG00000007914	NOL6	97	54.326	Equus_caballus
ENSSDUG00000016772	nol6	99	80.018	ENSELUG00000017818	nol6	99	79.789	Esox_lucius
ENSSDUG00000016772	nol6	99	53.887	ENSFCAG00000006677	NOL6	98	53.885	Felis_catus
ENSSDUG00000016772	nol6	84	58.342	ENSFALG00000009997	NOL6	100	58.238	Ficedula_albicollis
ENSSDUG00000016772	nol6	98	53.791	ENSFDAG00000009930	NOL6	97	53.702	Fukomys_damarensis
ENSSDUG00000016772	nol6	100	84.321	ENSFHEG00000007788	nol6	100	84.321	Fundulus_heteroclitus
ENSSDUG00000016772	nol6	99	76.216	ENSGMOG00000000637	nol6	100	75.950	Gadus_morhua
ENSSDUG00000016772	nol6	96	58.636	ENSGALG00000030730	NOL6	99	57.281	Gallus_gallus
ENSSDUG00000016772	nol6	100	84.220	ENSGAFG00000009378	nol6	100	84.045	Gambusia_affinis
ENSSDUG00000016772	nol6	98	83.851	ENSGACG00000010296	nol6	99	83.407	Gasterosteus_aculeatus
ENSSDUG00000016772	nol6	99	57.937	ENSGAGG00000019996	NOL6	100	57.672	Gopherus_agassizii
ENSSDUG00000016772	nol6	98	54.237	ENSGGOG00000003997	NOL6	97	54.148	Gorilla_gorilla
ENSSDUG00000016772	nol6	100	88.066	ENSHBUG00000010058	nol6	100	87.892	Haplochromis_burtoni
ENSSDUG00000016772	nol6	98	53.743	ENSHGLG00000009478	NOL6	97	53.832	Heterocephalus_glaber_female
ENSSDUG00000016772	nol6	98	53.743	ENSHGLG00100014962	NOL6	97	53.832	Heterocephalus_glaber_male
ENSSDUG00000016772	nol6	98	79.608	ENSHCOG00000020017	nol6	99	79.430	Hippocampus_comes
ENSSDUG00000016772	nol6	99	71.491	ENSIPUG00000018266	nol6	99	71.055	Ictalurus_punctatus
ENSSDUG00000016772	nol6	98	53.791	ENSSTOG00000015854	NOL6	97	53.702	Ictidomys_tridecemlineatus
ENSSDUG00000016772	nol6	96	53.895	ENSJJAG00000024225	Nol6	99	52.572	Jaculus_jaculus
ENSSDUG00000016772	nol6	100	84.922	ENSKMAG00000004749	nol6	100	85.562	Kryptolebias_marmoratus
ENSSDUG00000016772	nol6	99	84.364	ENSLBEG00000006902	nol6	99	84.336	Labrus_bergylta
ENSSDUG00000016772	nol6	72	50.540	ENSLACG00000006368	NOL6	99	50.540	Latimeria_chalumnae
ENSSDUG00000016772	nol6	97	61.662	ENSLOCG00000004991	nol6	99	61.613	Lepisosteus_oculatus
ENSSDUG00000016772	nol6	98	54.359	ENSLAFG00000004990	NOL6	97	54.270	Loxodonta_africana
ENSSDUG00000016772	nol6	98	54.148	ENSMFAG00000040117	NOL6	97	54.059	Macaca_fascicularis
ENSSDUG00000016772	nol6	98	54.148	ENSMMUG00000000389	NOL6	99	54.059	Macaca_mulatta
ENSSDUG00000016772	nol6	98	54.148	ENSMNEG00000040252	NOL6	97	54.059	Macaca_nemestrina
ENSSDUG00000016772	nol6	98	54.148	ENSMLEG00000043468	NOL6	97	54.059	Mandrillus_leucophaeus
ENSSDUG00000016772	nol6	99	87.413	ENSMAMG00000011484	nol6	99	87.367	Mastacembelus_armatus
ENSSDUG00000016772	nol6	100	87.979	ENSMZEG00005014058	nol6	100	87.805	Maylandia_zebra
ENSSDUG00000016772	nol6	89	48.077	ENSMGAG00000016978	NOL6	86	55.324	Meleagris_gallopavo
ENSSDUG00000016772	nol6	62	53.212	ENSMAUG00000010790	Nol6	100	53.073	Mesocricetus_auratus
ENSSDUG00000016772	nol6	98	54.862	ENSMICG00000012157	NOL6	97	54.505	Microcebus_murinus
ENSSDUG00000016772	nol6	98	53.963	ENSMOCG00000010981	Nol6	97	53.874	Microtus_ochrogaster
ENSSDUG00000016772	nol6	100	86.288	ENSMMOG00000005625	nol6	100	86.114	Mola_mola
ENSSDUG00000016772	nol6	99	51.703	ENSMODG00000003802	NOL6	97	51.616	Monodelphis_domestica
ENSSDUG00000016772	nol6	100	87.511	ENSMALG00000009130	nol6	100	87.336	Monopterus_albus
ENSSDUG00000016772	nol6	99	52.402	MGP_CAROLIEiJ_G0025907	Nol6	99	52.314	Mus_caroli
ENSSDUG00000016772	nol6	99	52.227	ENSMUSG00000028430	Nol6	98	52.140	Mus_musculus
ENSSDUG00000016772	nol6	99	52.507	MGP_PahariEiJ_G0024030	Nol6	99	52.419	Mus_pahari
ENSSDUG00000016772	nol6	99	52.227	MGP_SPRETEiJ_G0026855	Nol6	98	52.140	Mus_spretus
ENSSDUG00000016772	nol6	96	53.224	ENSMPUG00000003922	NOL6	98	51.969	Mustela_putorius_furo
ENSSDUG00000016772	nol6	96	54.652	ENSMLUG00000003230	NOL6	95	54.562	Myotis_lucifugus
ENSSDUG00000016772	nol6	97	53.549	ENSNGAG00000017803	Nol6	96	53.459	Nannospalax_galili
ENSSDUG00000016772	nol6	100	86.736	ENSNBRG00000001435	nol6	100	86.562	Neolamprologus_brichardi
ENSSDUG00000016772	nol6	98	51.943	ENSNLEG00000005056	NOL6	97	51.943	Nomascus_leucogenys
ENSSDUG00000016772	nol6	98	51.111	ENSMEUG00000004232	NOL6	99	51.022	Notamacropus_eugenii
ENSSDUG00000016772	nol6	96	52.957	ENSOPRG00000016817	NOL6	97	52.866	Ochotona_princeps
ENSSDUG00000016772	nol6	98	53.778	ENSODEG00000015856	NOL6	97	53.689	Octodon_degus
ENSSDUG00000016772	nol6	100	88.056	ENSONIG00000015951	nol6	100	87.881	Oreochromis_niloticus
ENSSDUG00000016772	nol6	81	43.209	ENSOANG00000010217	-	97	42.189	Ornithorhynchus_anatinus
ENSSDUG00000016772	nol6	96	55.232	ENSOCUG00000026918	NOL6	98	53.853	Oryctolagus_cuniculus
ENSSDUG00000016772	nol6	99	82.244	ENSORLG00000010159	nol6	99	82.244	Oryzias_latipes
ENSSDUG00000016772	nol6	99	82.281	ENSORLG00015023273	nol6	99	82.509	Oryzias_latipes_hsok
ENSSDUG00000016772	nol6	100	83.144	ENSOMEG00000006877	nol6	100	82.969	Oryzias_melastigma
ENSSDUG00000016772	nol6	99	54.028	ENSOGAG00000014354	NOL6	99	53.968	Otolemur_garnettii
ENSSDUG00000016772	nol6	98	53.860	ENSOARG00000009424	NOL6	97	53.771	Ovis_aries
ENSSDUG00000016772	nol6	98	54.505	ENSPPAG00000040840	NOL6	97	54.416	Pan_paniscus
ENSSDUG00000016772	nol6	99	53.584	ENSPPRG00000003583	NOL6	99	53.497	Panthera_pardus
ENSSDUG00000016772	nol6	99	53.497	ENSPTIG00000002752	NOL6	99	53.409	Panthera_tigris_altaica
ENSSDUG00000016772	nol6	98	54.683	ENSPTRG00000020861	NOL6	97	54.594	Pan_troglodytes
ENSSDUG00000016772	nol6	98	54.059	ENSPANG00000025310	NOL6	97	53.970	Papio_anubis
ENSSDUG00000016772	nol6	99	71.889	ENSPKIG00000011418	nol6	99	72.271	Paramormyrops_kingsleyae
ENSSDUG00000016772	nol6	97	56.887	ENSPSIG00000014763	NOL6	99	55.954	Pelodiscus_sinensis
ENSSDUG00000016772	nol6	97	78.700	ENSPMGG00000015119	nol6	100	78.700	Periophthalmus_magnuspinnatus
ENSSDUG00000016772	nol6	97	54.586	ENSPEMG00000011998	Nol6	96	54.496	Peromyscus_maniculatus_bairdii
ENSSDUG00000016772	nol6	98	53.327	ENSPCIG00000029061	NOL6	99	52.972	Phascolarctos_cinereus
ENSSDUG00000016772	nol6	100	84.307	ENSPFOG00000003825	nol6	100	84.133	Poecilia_formosa
ENSSDUG00000016772	nol6	100	84.394	ENSPLAG00000001410	nol6	100	84.220	Poecilia_latipinna
ENSSDUG00000016772	nol6	100	84.307	ENSPMEG00000021561	nol6	100	84.133	Poecilia_mexicana
ENSSDUG00000016772	nol6	100	84.133	ENSPREG00000004807	nol6	100	83.958	Poecilia_reticulata
ENSSDUG00000016772	nol6	98	54.359	ENSPPYG00000019133	NOL6	97	54.270	Pongo_abelii
ENSSDUG00000016772	nol6	99	54.770	ENSPCOG00000019262	NOL6	98	54.425	Propithecus_coquereli
ENSSDUG00000016772	nol6	99	51.528	ENSPVAG00000011487	NOL6	99	51.441	Pteropus_vampyrus
ENSSDUG00000016772	nol6	100	86.736	ENSPNYG00000020726	nol6	100	86.562	Pundamilia_nyererei
ENSSDUG00000016772	nol6	99	70.470	ENSPNAG00000028102	nol6	99	70.800	Pygocentrus_nattereri
ENSSDUG00000016772	nol6	97	54.047	ENSRNOG00000010409	Nol6	97	53.957	Rattus_norvegicus
ENSSDUG00000016772	nol6	99	51.491	ENSRBIG00000016646	NOL6	99	51.786	Rhinopithecus_bieti
ENSSDUG00000016772	nol6	99	53.587	ENSRROG00000039046	NOL6	99	52.845	Rhinopithecus_roxellana
ENSSDUG00000016772	nol6	99	54.650	ENSSBOG00000029525	NOL6	99	54.562	Saimiri_boliviensis_boliviensis
ENSSDUG00000016772	nol6	99	52.687	ENSSHAG00000004050	NOL6	98	52.339	Sarcophilus_harrisii
ENSSDUG00000016772	nol6	99	73.450	ENSSFOG00015016052	nol6	99	73.450	Scleropages_formosus
ENSSDUG00000016772	nol6	99	90.535	ENSSMAG00000008757	nol6	99	90.611	Scophthalmus_maximus
ENSSDUG00000016772	nol6	100	98.863	ENSSLDG00000017046	nol6	100	98.863	Seriola_lalandi_dorsalis
ENSSDUG00000016772	nol6	86	55.679	ENSSARG00000010381	NOL6	85	55.710	Sorex_araneus
ENSSDUG00000016772	nol6	99	55.895	ENSSPUG00000008506	NOL6	99	56.239	Sphenodon_punctatus
ENSSDUG00000016772	nol6	99	89.248	ENSSPAG00000005542	nol6	99	89.248	Stegastes_partitus
ENSSDUG00000016772	nol6	99	54.116	ENSSSCG00000010990	NOL6	99	54.028	Sus_scrofa
ENSSDUG00000016772	nol6	96	58.356	ENSTGUG00000001674	NOL6	99	58.197	Taeniopygia_guttata
ENSSDUG00000016772	nol6	100	83.319	ENSTRUG00000005694	nol6	100	83.231	Takifugu_rubripes
ENSSDUG00000016772	nol6	98	83.082	ENSTNIG00000003826	nol6	99	82.817	Tetraodon_nigroviridis
ENSSDUG00000016772	nol6	84	51.301	ENSTBEG00000003239	NOL6	85	51.197	Tupaia_belangeri
ENSSDUG00000016772	nol6	89	55.070	ENSTTRG00000010584	NOL6	93	53.880	Tursiops_truncatus
ENSSDUG00000016772	nol6	98	54.011	ENSUAMG00000025594	NOL6	99	54.148	Ursus_americanus
ENSSDUG00000016772	nol6	96	55.041	ENSUMAG00000006051	NOL6	97	54.416	Ursus_maritimus
ENSSDUG00000016772	nol6	96	55.041	ENSVVUG00000021087	NOL6	99	53.715	Vulpes_vulpes
ENSSDUG00000016772	nol6	99	51.094	ENSXETG00000002153	nol6	99	51.142	Xenopus_tropicalis
ENSSDUG00000016772	nol6	100	84.394	ENSXMAG00000019408	nol6	100	84.220	Xiphophorus_maculatus