EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000016795 (Gene tree)
Gene ID: 111221002
Gene Symbol: gars (1 of many)
Alias: metronome|mrn|si:dkey-276i5.1|wu:fb02f03
Full Name: glycine--tRNA ligase
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 7384 bases
Position: chrBDQW01000079.1:2649134-2656517
Accession: 111221002
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000023145	HGTP_anticodon	PF03129.20	1.9e-21	1	1
ENSSDUP00000023145	tRNA-synt_2b	PF00587.25	5.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000023571	-	3132	XM_022744320	ENSSDUP00000023145	749 (aa)	XP_022600041	UPI000BBE4260

Gene Model

Click here to download ENSSDUG00000016795's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000016795's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000016795	gars	90	75.811	ENSSDUG00000016758	gars	100	75.811

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000016795	gars	92	86.522	ENSG00000106105	GARS	93	86.522	Homo_sapiens
ENSSDUG00000016795	gars	91	82.941	ENSAPOG00000020089	gars	99	82.941	Acanthochromis_polyacanthus
ENSSDUG00000016795	gars	100	94.526	ENSAPOG00000019999	gars	100	94.526	Acanthochromis_polyacanthus
ENSSDUG00000016795	gars	96	84.658	ENSAMEG00000006652	GARS	99	82.243	Ailuropoda_melanoleuca
ENSSDUG00000016795	gars	90	85.503	ENSACIG00000020797	gars	99	85.503	Amphilophus_citrinellus
ENSSDUG00000016795	gars	100	94.126	ENSACIG00000020744	gars	100	94.126	Amphilophus_citrinellus
ENSSDUG00000016795	gars	68	88.039	ENSAOCG00000002479	gars	100	88.039	Amphiprion_ocellaris
ENSSDUG00000016795	gars	100	95.461	ENSAOCG00000009108	gars	100	95.461	Amphiprion_ocellaris
ENSSDUG00000016795	gars	100	95.060	ENSAPEG00000018850	gars	100	95.060	Amphiprion_percula
ENSSDUG00000016795	gars	91	83.650	ENSAPEG00000018903	gars	99	83.650	Amphiprion_percula
ENSSDUG00000016795	gars	100	94.834	ENSATEG00000008784	gars	100	96.662	Anabas_testudineus
ENSSDUG00000016795	gars	62	87.716	ENSAPLG00000015638	-	100	87.716	Anas_platyrhynchos
ENSSDUG00000016795	gars	91	85.569	ENSACAG00000005601	GARS	100	85.569	Anolis_carolinensis
ENSSDUG00000016795	gars	97	82.377	ENSANAG00000022536	GARS	100	87.445	Aotus_nancymaae
ENSSDUG00000016795	gars	100	93.725	ENSACLG00000027174	gars	100	93.725	Astatotilapia_calliptera
ENSSDUG00000016795	gars	90	83.923	ENSACLG00000027158	gars	99	83.923	Astatotilapia_calliptera
ENSSDUG00000016795	gars	100	81.308	ENSAMXG00000014895	gars	96	91.290	Astyanax_mexicanus
ENSSDUG00000016795	gars	94	84.375	ENSBTAG00000018972	GARS	98	82.873	Bos_taurus
ENSSDUG00000016795	gars	90	56.845	WBGene00001744	gars-1	99	56.845	Caenorhabditis_elegans
ENSSDUG00000016795	gars	92	86.667	ENSCJAG00000008595	GARS	95	85.797	Callithrix_jacchus
ENSSDUG00000016795	gars	91	87.353	ENSCAFG00000003086	GARS	91	81.855	Canis_familiaris
ENSSDUG00000016795	gars	91	87.353	ENSCAFG00020004272	GARS	98	87.353	Canis_lupus_dingo
ENSSDUG00000016795	gars	95	82.937	ENSCHIG00000016912	GARS	100	87.175	Capra_hircus
ENSSDUG00000016795	gars	95	84.895	ENSTSYG00000008538	GARS	99	82.109	Carlito_syrichta
ENSSDUG00000016795	gars	84	68.354	ENSCAPG00000007526	GARS	100	68.354	Cavia_aperea
ENSSDUG00000016795	gars	90	85.778	ENSCPOG00000007547	GARS	100	81.088	Cavia_porcellus
ENSSDUG00000016795	gars	92	86.957	ENSCCAG00000011512	GARS	93	86.957	Cebus_capucinus
ENSSDUG00000016795	gars	95	85.035	ENSCATG00000036699	GARS	96	85.035	Cercocebus_atys
ENSSDUG00000016795	gars	92	86.377	ENSCLAG00000007985	GARS	97	86.377	Chinchilla_lanigera
ENSSDUG00000016795	gars	95	84.895	ENSCSAG00000014588	GARS	96	84.895	Chlorocebus_sabaeus
ENSSDUG00000016795	gars	91	74.781	ENSCHOG00000003253	GARS	96	72.829	Choloepus_hoffmanni
ENSSDUG00000016795	gars	89	87.838	ENSCPBG00000019482	GARS	91	87.838	Chrysemys_picta_bellii
ENSSDUG00000016795	gars	90	62.315	ENSCING00000008937	-	99	62.315	Ciona_intestinalis
ENSSDUG00000016795	gars	95	84.594	ENSCANG00000027727	GARS	99	81.891	Colobus_angolensis_palliatus
ENSSDUG00000016795	gars	92	87.663	ENSCGRG00001020450	Gars	94	87.663	Cricetulus_griseus_chok1gshd
ENSSDUG00000016795	gars	89	88.889	ENSCGRG00000008342	Gars	94	88.889	Cricetulus_griseus_crigri
ENSSDUG00000016795	gars	100	93.333	ENSCSEG00000017671	gars	100	93.333	Cynoglossus_semilaevis
ENSSDUG00000016795	gars	90	78.466	ENSCSEG00000017654	gars	98	78.466	Cynoglossus_semilaevis
ENSSDUG00000016795	gars	100	92.800	ENSCVAG00000007149	gars	99	92.800	Cyprinodon_variegatus
ENSSDUG00000016795	gars	92	92.464	ENSDARG00000059070	gars	100	92.464	Danio_rerio
ENSSDUG00000016795	gars	91	87.609	ENSDNOG00000046478	GARS	100	88.316	Dasypus_novemcinctus
ENSSDUG00000016795	gars	91	85.839	ENSDORG00000002672	Gars	95	85.384	Dipodomys_ordii
ENSSDUG00000016795	gars	93	59.541	FBgn0027088	GlyRS	99	60.741	Drosophila_melanogaster
ENSSDUG00000016795	gars	84	84.897	ENSETEG00000012196	GARS	98	84.897	Echinops_telfairi
ENSSDUG00000016795	gars	63	73.849	ENSEBUG00000002654	gars	86	73.849	Eptatretus_burgeri
ENSSDUG00000016795	gars	73	72.029	ENSEBUG00000002254	gars	99	71.795	Eptatretus_burgeri
ENSSDUG00000016795	gars	92	87.265	ENSEASG00005000388	GARS	96	85.175	Equus_asinus_asinus
ENSSDUG00000016795	gars	92	87.410	ENSECAG00000019373	GARS	96	85.315	Equus_caballus
ENSSDUG00000016795	gars	99	89.586	ENSELUG00000003692	gars	100	89.586	Esox_lucius
ENSSDUG00000016795	gars	92	87.101	ENSFCAG00000011415	GARS	81	87.101	Felis_catus
ENSSDUG00000016795	gars	82	87.500	ENSFALG00000006550	GARS	100	87.500	Ficedula_albicollis
ENSSDUG00000016795	gars	89	87.669	ENSFDAG00000014466	GARS	100	87.669	Fukomys_damarensis
ENSSDUG00000016795	gars	100	93.209	ENSFHEG00000013189	gars	99	93.209	Fundulus_heteroclitus
ENSSDUG00000016795	gars	83	79.808	ENSGMOG00000008856	-	100	79.808	Gadus_morhua
ENSSDUG00000016795	gars	99	87.299	ENSGMOG00000010728	gars	100	87.299	Gadus_morhua
ENSSDUG00000016795	gars	91	86.569	ENSGALG00000005694	GARS	100	86.569	Gallus_gallus
ENSSDUG00000016795	gars	100	92.533	ENSGAFG00000005228	gars	99	92.533	Gambusia_affinis
ENSSDUG00000016795	gars	99	92.256	ENSGACG00000003410	gars	100	92.256	Gasterosteus_aculeatus
ENSSDUG00000016795	gars	82	88.979	ENSGAGG00000017755	GARS	99	88.979	Gopherus_agassizii
ENSSDUG00000016795	gars	92	86.812	ENSGGOG00000004916	GARS	93	86.812	Gorilla_gorilla
ENSSDUG00000016795	gars	100	93.992	ENSHBUG00000016481	gars	100	93.992	Haplochromis_burtoni
ENSSDUG00000016795	gars	90	83.333	ENSHBUG00000000815	gars	99	83.333	Haplochromis_burtoni
ENSSDUG00000016795	gars	95	84.167	ENSHGLG00000016342	GARS	100	82.591	Heterocephalus_glaber_female
ENSSDUG00000016795	gars	92	86.087	ENSHGLG00100006787	GARS	97	86.087	Heterocephalus_glaber_male
ENSSDUG00000016795	gars	91	90.219	ENSHCOG00000005261	gars	100	90.219	Hippocampus_comes
ENSSDUG00000016795	gars	50	71.618	ENSHCOG00000005286	gars	96	71.618	Hippocampus_comes
ENSSDUG00000016795	gars	99	82.205	ENSIPUG00000011443	gars	100	82.205	Ictalurus_punctatus
ENSSDUG00000016795	gars	92	85.940	ENSSTOG00000015493	GARS	92	85.940	Ictidomys_tridecemlineatus
ENSSDUG00000016795	gars	91	86.152	ENSJJAG00000022474	Gars	99	86.152	Jaculus_jaculus
ENSSDUG00000016795	gars	100	91.633	ENSKMAG00000010428	gars	100	91.501	Kryptolebias_marmoratus
ENSSDUG00000016795	gars	90	85.355	ENSLBEG00000019179	gars	100	85.355	Labrus_bergylta
ENSSDUG00000016795	gars	99	95.594	ENSLBEG00000019228	gars	100	95.594	Labrus_bergylta
ENSSDUG00000016795	gars	52	82.474	ENSLBEG00000013122	-	100	82.474	Labrus_bergylta
ENSSDUG00000016795	gars	69	87.308	ENSLACG00000002810	GARS	100	87.308	Latimeria_chalumnae
ENSSDUG00000016795	gars	100	87.450	ENSLOCG00000009688	gars	99	87.450	Lepisosteus_oculatus
ENSSDUG00000016795	gars	91	86.569	ENSLAFG00000002496	GARS	99	85.260	Loxodonta_africana
ENSSDUG00000016795	gars	95	85.035	ENSMFAG00000038863	GARS	96	85.035	Macaca_fascicularis
ENSSDUG00000016795	gars	95	85.035	ENSMMUG00000004719	GARS	96	85.035	Macaca_mulatta
ENSSDUG00000016795	gars	95	78.741	ENSMNEG00000043203	GARS	96	78.741	Macaca_nemestrina
ENSSDUG00000016795	gars	95	85.175	ENSMLEG00000044430	GARS	96	85.175	Mandrillus_leucophaeus
ENSSDUG00000016795	gars	98	94.030	ENSMAMG00000001894	gars	99	94.603	Mastacembelus_armatus
ENSSDUG00000016795	gars	90	84.467	ENSMZEG00005019754	gars	100	84.467	Maylandia_zebra
ENSSDUG00000016795	gars	100	93.725	ENSMZEG00005019740	gars	100	93.725	Maylandia_zebra
ENSSDUG00000016795	gars	92	86.252	ENSMGAG00000003162	GARS	93	86.252	Meleagris_gallopavo
ENSSDUG00000016795	gars	92	87.518	ENSMAUG00000016852	Gars	94	87.518	Mesocricetus_auratus
ENSSDUG00000016795	gars	91	87.445	ENSMICG00000046006	GARS	100	87.445	Microcebus_murinus
ENSSDUG00000016795	gars	97	83.470	ENSMOCG00000017680	Gars	99	83.470	Microtus_ochrogaster
ENSSDUG00000016795	gars	99	89.348	ENSMMOG00000009695	gars	100	89.348	Mola_mola
ENSSDUG00000016795	gars	100	93.858	ENSMALG00000006592	gars	93	93.858	Monopterus_albus
ENSSDUG00000016795	gars	92	87.373	MGP_CAROLIEiJ_G0028410	Gars	94	87.373	Mus_caroli
ENSSDUG00000016795	gars	92	87.373	ENSMUSG00000029777	Gars	94	87.373	Mus_musculus
ENSSDUG00000016795	gars	92	86.792	MGP_PahariEiJ_G0022160	Gars	94	86.792	Mus_pahari
ENSSDUG00000016795	gars	92	87.373	MGP_SPRETEiJ_G0029412	Gars	99	88.462	Mus_spretus
ENSSDUG00000016795	gars	92	87.246	ENSMPUG00000005116	GARS	99	81.867	Mustela_putorius_furo
ENSSDUG00000016795	gars	91	87.318	ENSMLUG00000002043	GARS	93	87.318	Myotis_lucifugus
ENSSDUG00000016795	gars	91	87.281	ENSNGAG00000021844	Gars	95	86.792	Nannospalax_galili
ENSSDUG00000016795	gars	100	94.259	ENSNBRG00000018585	gars	100	94.259	Neolamprologus_brichardi
ENSSDUG00000016795	gars	52	83.033	ENSNBRG00000018643	gars	100	83.033	Neolamprologus_brichardi
ENSSDUG00000016795	gars	95	85.513	ENSNLEG00000015152	GARS	98	83.929	Nomascus_leucogenys
ENSSDUG00000016795	gars	89	78.163	ENSMEUG00000001741	GARS	100	78.163	Notamacropus_eugenii
ENSSDUG00000016795	gars	83	88.776	ENSOPRG00000005342	GARS	83	88.776	Ochotona_princeps
ENSSDUG00000016795	gars	92	85.612	ENSODEG00000008246	GARS	88	85.612	Octodon_degus
ENSSDUG00000016795	gars	89	82.239	ENSOANG00000006262	GARS	91	82.239	Ornithorhynchus_anatinus
ENSSDUG00000016795	gars	91	86.892	ENSOCUG00000005295	GARS	99	86.892	Oryctolagus_cuniculus
ENSSDUG00000016795	gars	100	89.214	ENSORLG00000009470	gars	100	89.214	Oryzias_latipes
ENSSDUG00000016795	gars	95	90.691	ENSORLG00020013036	gars	100	89.950	Oryzias_latipes_hni
ENSSDUG00000016795	gars	100	90.387	ENSORLG00015012886	gars	100	90.387	Oryzias_latipes_hsok
ENSSDUG00000016795	gars	52	81.726	ENSOMEG00000000133	gars	100	81.726	Oryzias_melastigma
ENSSDUG00000016795	gars	99	81.575	ENSOGAG00000013321	GARS	99	81.575	Otolemur_garnettii
ENSSDUG00000016795	gars	96	82.687	ENSOARG00000008017	GARS	99	80.319	Ovis_aries
ENSSDUG00000016795	gars	95	84.810	ENSPPAG00000037266	GARS	99	82.970	Pan_paniscus
ENSSDUG00000016795	gars	92	87.101	ENSPPRG00000001917	GARS	93	87.101	Panthera_pardus
ENSSDUG00000016795	gars	91	87.923	ENSPTIG00000016096	GARS	99	87.923	Panthera_tigris_altaica
ENSSDUG00000016795	gars	95	84.810	ENSPTRG00000019042	GARS	100	82.416	Pan_troglodytes
ENSSDUG00000016795	gars	95	85.175	ENSPANG00000026231	GARS	96	85.175	Papio_anubis
ENSSDUG00000016795	gars	99	86.096	ENSPKIG00000014863	gars	97	86.096	Paramormyrops_kingsleyae
ENSSDUG00000016795	gars	89	88.288	ENSPSIG00000010935	GARS	99	89.286	Pelodiscus_sinensis
ENSSDUG00000016795	gars	100	86.991	ENSPMGG00000023644	gars	100	86.991	Periophthalmus_magnuspinnatus
ENSSDUG00000016795	gars	52	80.964	ENSPMGG00000023648	gars	99	80.964	Periophthalmus_magnuspinnatus
ENSSDUG00000016795	gars	89	88.421	ENSPEMG00000019930	Gars	100	88.421	Peromyscus_maniculatus_bairdii
ENSSDUG00000016795	gars	91	76.867	ENSPMAG00000006586	gars	98	76.867	Petromyzon_marinus
ENSSDUG00000016795	gars	92	82.558	ENSPCIG00000017010	GARS	90	82.558	Phascolarctos_cinereus
ENSSDUG00000016795	gars	100	92.667	ENSPFOG00000004593	gars	99	92.667	Poecilia_formosa
ENSSDUG00000016795	gars	100	92.400	ENSPLAG00000008038	gars	99	92.400	Poecilia_latipinna
ENSSDUG00000016795	gars	100	92.800	ENSPMEG00000005901	gars	99	92.800	Poecilia_mexicana
ENSSDUG00000016795	gars	99	93.164	ENSPREG00000020960	gars	97	93.164	Poecilia_reticulata
ENSSDUG00000016795	gars	92	86.463	ENSPPYG00000017673	GARS	98	82.967	Pongo_abelii
ENSSDUG00000016795	gars	99	80.374	ENSPCAG00000007199	GARS	99	80.374	Procavia_capensis
ENSSDUG00000016795	gars	92	83.768	ENSPCOG00000008887	GARS	99	79.039	Propithecus_coquereli
ENSSDUG00000016795	gars	99	82.510	ENSPVAG00000013565	GARS	99	82.510	Pteropus_vampyrus
ENSSDUG00000016795	gars	90	83.481	ENSPNYG00000004960	gars	99	83.481	Pundamilia_nyererei
ENSSDUG00000016795	gars	100	93.324	ENSPNYG00000005017	gars	100	93.324	Pundamilia_nyererei
ENSSDUG00000016795	gars	100	84.513	ENSPNAG00000020164	gars	99	84.513	Pygocentrus_nattereri
ENSSDUG00000016795	gars	92	87.228	ENSRNOG00000011052	Gars	95	87.228	Rattus_norvegicus
ENSSDUG00000016795	gars	92	84.058	ENSRBIG00000040287	GARS	98	81.440	Rhinopithecus_bieti
ENSSDUG00000016795	gars	92	86.377	ENSRROG00000044600	GARS	98	83.657	Rhinopithecus_roxellana
ENSSDUG00000016795	gars	78	50.256	YPR081C	-	94	50.256	Saccharomyces_cerevisiae
ENSSDUG00000016795	gars	82	46.861	YBR121C	GRS1	98	47.167	Saccharomyces_cerevisiae
ENSSDUG00000016795	gars	92	86.377	ENSSBOG00000022287	GARS	93	86.377	Saimiri_boliviensis_boliviensis
ENSSDUG00000016795	gars	91	78.551	ENSSHAG00000003419	GARS	100	78.551	Sarcophilus_harrisii
ENSSDUG00000016795	gars	92	90.552	ENSSFOG00015000573	gars	100	84.293	Scleropages_formosus
ENSSDUG00000016795	gars	90	85.481	ENSSMAG00000013709	gars	99	85.481	Scophthalmus_maximus
ENSSDUG00000016795	gars	100	95.739	ENSSMAG00000013672	gars	100	95.739	Scophthalmus_maximus
ENSSDUG00000016795	gars	90	86.538	ENSSLDG00000014238	gars	100	86.538	Seriola_lalandi_dorsalis
ENSSDUG00000016795	gars	100	99.466	ENSSLDG00000014279	gars	100	99.466	Seriola_lalandi_dorsalis
ENSSDUG00000016795	gars	69	77.323	ENSSARG00000008410	GARS	82	77.323	Sorex_araneus
ENSSDUG00000016795	gars	91	86.804	ENSSPUG00000001815	-	99	81.342	Sphenodon_punctatus
ENSSDUG00000016795	gars	100	89.453	ENSSPAG00000012003	gars	99	89.453	Stegastes_partitus
ENSSDUG00000016795	gars	91	87.153	ENSSSCG00000016677	GARS	99	81.333	Sus_scrofa
ENSSDUG00000016795	gars	89	84.179	ENSTGUG00000000364	GARS	100	84.179	Taeniopygia_guttata
ENSSDUG00000016795	gars	99	91.188	ENSTRUG00000017557	gars	100	91.188	Takifugu_rubripes
ENSSDUG00000016795	gars	95	91.702	ENSTNIG00000012738	gars	100	91.702	Tetraodon_nigroviridis
ENSSDUG00000016795	gars	90	77.047	ENSTBEG00000008972	GARS	91	77.047	Tupaia_belangeri
ENSSDUG00000016795	gars	89	86.446	ENSTTRG00000000334	GARS	99	86.446	Tursiops_truncatus
ENSSDUG00000016795	gars	91	88.029	ENSUAMG00000016756	GARS	99	82.644	Ursus_americanus
ENSSDUG00000016795	gars	89	87.838	ENSUMAG00000002158	GARS	100	89.123	Ursus_maritimus
ENSSDUG00000016795	gars	92	80.000	ENSVPAG00000009438	GARS	95	80.000	Vicugna_pacos
ENSSDUG00000016795	gars	91	87.353	ENSVVUG00000020981	GARS	88	86.861	Vulpes_vulpes
ENSSDUG00000016795	gars	99	80.132	ENSXETG00000018474	gars	97	80.132	Xenopus_tropicalis
ENSSDUG00000016795	gars	100	91.114	ENSXCOG00000010005	gars	99	91.114	Xiphophorus_couchianus
ENSSDUG00000016795	gars	100	92.400	ENSXMAG00000009402	gars	98	92.400	Xiphophorus_maculatus