EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000016810 (Gene tree)
Gene ID: 111231148
Gene Symbol: thoc1
Alias: p84
Full Name: THO complex 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 12816 bases
Position: chrBDQW01000291.1:5227037-5239852
Accession: 111231148
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000023166	efThoc1	PF11957.8	1e-144	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000023592	-	6906	XM_022758161	ENSSDUP00000023166	654 (aa)	XP_022613882	UPI000BBEE0EB

Gene Model

Click here to download ENSSDUG00000016810's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03013	RNA transport	KEGG
sdu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000016810's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000016810	thoc1	99	73.272	ENSG00000079134	THOC1	99	77.941	Homo_sapiens
ENSSDUG00000016810	thoc1	99	73.425	ENSAMEG00000006645	THOC1	98	73.425	Ailuropoda_melanoleuca
ENSSDUG00000016810	thoc1	98	87.774	ENSACIG00000019392	thoc1	95	91.694	Amphilophus_citrinellus
ENSSDUG00000016810	thoc1	100	89.755	ENSAOCG00000008391	thoc1	100	89.755	Amphiprion_ocellaris
ENSSDUG00000016810	thoc1	100	95.413	ENSAPEG00000001093	thoc1	100	95.413	Amphiprion_percula
ENSSDUG00000016810	thoc1	100	95.566	ENSATEG00000004783	thoc1	100	95.566	Anabas_testudineus
ENSSDUG00000016810	thoc1	99	72.783	ENSAPLG00000016149	THOC1	98	72.783	Anas_platyrhynchos
ENSSDUG00000016810	thoc1	99	73.780	ENSACAG00000008307	THOC1	97	73.171	Anolis_carolinensis
ENSSDUG00000016810	thoc1	99	72.644	ENSANAG00000033200	THOC1	98	72.644	Aotus_nancymaae
ENSSDUG00000016810	thoc1	100	94.037	ENSACLG00000016836	thoc1	100	94.037	Astatotilapia_calliptera
ENSSDUG00000016810	thoc1	94	77.389	ENSAMXG00000014708	thoc1	98	76.715	Astyanax_mexicanus
ENSSDUG00000016810	thoc1	99	74.040	ENSBTAG00000019215	THOC1	98	74.040	Bos_taurus
ENSSDUG00000016810	thoc1	69	35.560	WBGene00020172	thoc-1	65	35.991	Caenorhabditis_elegans
ENSSDUG00000016810	thoc1	99	73.425	ENSCJAG00000020450	THOC1	98	73.425	Callithrix_jacchus
ENSSDUG00000016810	thoc1	99	73.579	ENSCAFG00000018324	THOC1	98	73.579	Canis_familiaris
ENSSDUG00000016810	thoc1	99	73.579	ENSCAFG00020017894	THOC1	98	73.579	Canis_lupus_dingo
ENSSDUG00000016810	thoc1	99	74.040	ENSCHIG00000015399	THOC1	98	74.961	Capra_hircus
ENSSDUG00000016810	thoc1	99	73.272	ENSTSYG00000010585	THOC1	98	73.272	Carlito_syrichta
ENSSDUG00000016810	thoc1	97	53.605	ENSCAPG00000016270	THOC1	97	53.605	Cavia_aperea
ENSSDUG00000016810	thoc1	99	72.350	ENSCPOG00000000959	THOC1	98	72.350	Cavia_porcellus
ENSSDUG00000016810	thoc1	99	73.425	ENSCCAG00000025766	THOC1	98	73.425	Cebus_capucinus
ENSSDUG00000016810	thoc1	99	71.275	ENSCATG00000028180	THOC1	96	78.324	Cercocebus_atys
ENSSDUG00000016810	thoc1	97	74.016	ENSCLAG00000009117	THOC1	99	74.016	Chinchilla_lanigera
ENSSDUG00000016810	thoc1	99	73.425	ENSCSAG00000017631	THOC1	98	73.425	Chlorocebus_sabaeus
ENSSDUG00000016810	thoc1	79	77.551	ENSCHOG00000010609	THOC1	78	76.327	Choloepus_hoffmanni
ENSSDUG00000016810	thoc1	99	74.693	ENSCPBG00000027558	THOC1	99	74.693	Chrysemys_picta_bellii
ENSSDUG00000016810	thoc1	70	49.036	ENSCING00000007663	-	93	48.394	Ciona_intestinalis
ENSSDUG00000016810	thoc1	94	47.785	ENSCSAVG00000010649	-	100	47.627	Ciona_savignyi
ENSSDUG00000016810	thoc1	99	73.272	ENSCANG00000034265	THOC1	96	78.655	Colobus_angolensis_palliatus
ENSSDUG00000016810	thoc1	99	73.118	ENSCGRG00001016464	Thoc1	98	73.118	Cricetulus_griseus_chok1gshd
ENSSDUG00000016810	thoc1	89	60.477	ENSCGRG00000003390	-	97	60.477	Cricetulus_griseus_crigri
ENSSDUG00000016810	thoc1	98	73.178	ENSCGRG00000010269	-	99	74.016	Cricetulus_griseus_crigri
ENSSDUG00000016810	thoc1	99	89.058	ENSCSEG00000012486	thoc1	99	89.550	Cynoglossus_semilaevis
ENSSDUG00000016810	thoc1	100	90.061	ENSCVAG00000020600	thoc1	100	90.061	Cyprinodon_variegatus
ENSSDUG00000016810	thoc1	99	84.356	ENSDARG00000088246	thoc1	99	84.356	Danio_rerio
ENSSDUG00000016810	thoc1	99	73.385	ENSDNOG00000019217	THOC1	98	73.385	Dasypus_novemcinctus
ENSSDUG00000016810	thoc1	98	69.518	ENSDORG00000008060	Thoc1	98	70.236	Dipodomys_ordii
ENSSDUG00000016810	thoc1	80	41.636	FBgn0037382	Hpr1	74	41.410	Drosophila_melanogaster
ENSSDUG00000016810	thoc1	90	56.367	ENSETEG00000004165	THOC1	98	56.367	Echinops_telfairi
ENSSDUG00000016810	thoc1	92	64.000	ENSEBUG00000005998	thoc1	97	64.775	Eptatretus_burgeri
ENSSDUG00000016810	thoc1	99	73.272	ENSEASG00005002549	THOC1	94	73.272	Equus_asinus_asinus
ENSSDUG00000016810	thoc1	99	73.733	ENSECAG00000009267	THOC1	88	73.733	Equus_caballus
ENSSDUG00000016810	thoc1	79	58.865	ENSEEUG00000012214	-	81	58.865	Erinaceus_europaeus
ENSSDUG00000016810	thoc1	100	88.889	ENSELUG00000023277	thoc1	99	89.024	Esox_lucius
ENSSDUG00000016810	thoc1	99	73.886	ENSFCAG00000022454	THOC1	85	73.886	Felis_catus
ENSSDUG00000016810	thoc1	97	73.906	ENSFALG00000006205	THOC1	99	74.022	Ficedula_albicollis
ENSSDUG00000016810	thoc1	98	73.717	ENSFDAG00000006842	THOC1	99	73.717	Fukomys_damarensis
ENSSDUG00000016810	thoc1	100	91.284	ENSFHEG00000008841	thoc1	100	91.284	Fundulus_heteroclitus
ENSSDUG00000016810	thoc1	99	88.804	ENSGMOG00000011486	thoc1	99	88.804	Gadus_morhua
ENSSDUG00000016810	thoc1	99	73.773	ENSGALG00000014915	THOC1	99	72.879	Gallus_gallus
ENSSDUG00000016810	thoc1	100	90.214	ENSGAFG00000021464	thoc1	100	90.214	Gambusia_affinis
ENSSDUG00000016810	thoc1	100	92.661	ENSGACG00000017361	thoc1	100	92.661	Gasterosteus_aculeatus
ENSSDUG00000016810	thoc1	99	75.038	ENSGAGG00000021230	-	97	75.038	Gopherus_agassizii
ENSSDUG00000016810	thoc1	99	73.425	ENSGGOG00000003013	THOC1	98	73.425	Gorilla_gorilla
ENSSDUG00000016810	thoc1	100	94.343	ENSHBUG00000009096	thoc1	100	94.343	Haplochromis_burtoni
ENSSDUG00000016810	thoc1	70	68.020	ENSHGLG00000009264	-	98	71.351	Heterocephalus_glaber_female
ENSSDUG00000016810	thoc1	99	73.886	ENSHGLG00000003712	-	98	73.886	Heterocephalus_glaber_female
ENSSDUG00000016810	thoc1	99	73.733	ENSHGLG00100003570	THOC1	98	73.733	Heterocephalus_glaber_male
ENSSDUG00000016810	thoc1	77	59.043	ENSHGLG00100002225	-	97	60.923	Heterocephalus_glaber_male
ENSSDUG00000016810	thoc1	94	80.182	ENSIPUG00000005306	thoc1	99	79.235	Ictalurus_punctatus
ENSSDUG00000016810	thoc1	99	73.272	ENSSTOG00000006484	THOC1	98	73.272	Ictidomys_tridecemlineatus
ENSSDUG00000016810	thoc1	52	75.072	ENSJJAG00000014893	-	96	75.072	Jaculus_jaculus
ENSSDUG00000016810	thoc1	100	92.508	ENSKMAG00000003904	thoc1	99	92.649	Kryptolebias_marmoratus
ENSSDUG00000016810	thoc1	100	93.119	ENSLBEG00000020372	thoc1	98	93.119	Labrus_bergylta
ENSSDUG00000016810	thoc1	99	74.080	ENSLACG00000014869	THOC1	99	73.773	Latimeria_chalumnae
ENSSDUG00000016810	thoc1	100	84.323	ENSLOCG00000002097	thoc1	99	84.018	Lepisosteus_oculatus
ENSSDUG00000016810	thoc1	99	73.425	ENSLAFG00000009585	THOC1	98	73.425	Loxodonta_africana
ENSSDUG00000016810	thoc1	99	73.425	ENSMFAG00000041520	THOC1	98	73.425	Macaca_fascicularis
ENSSDUG00000016810	thoc1	99	73.425	ENSMMUG00000004662	THOC1	98	73.425	Macaca_mulatta
ENSSDUG00000016810	thoc1	99	73.425	ENSMNEG00000040177	THOC1	98	73.425	Macaca_nemestrina
ENSSDUG00000016810	thoc1	99	73.425	ENSMLEG00000034201	THOC1	98	73.425	Mandrillus_leucophaeus
ENSSDUG00000016810	thoc1	96	92.344	ENSMAMG00000016747	thoc1	100	92.344	Mastacembelus_armatus
ENSSDUG00000016810	thoc1	100	94.037	ENSMZEG00005024609	thoc1	100	94.037	Maylandia_zebra
ENSSDUG00000016810	thoc1	97	73.981	ENSMGAG00000009811	THOC1	99	73.981	Meleagris_gallopavo
ENSSDUG00000016810	thoc1	99	72.657	ENSMAUG00000010272	Thoc1	98	72.657	Mesocricetus_auratus
ENSSDUG00000016810	thoc1	99	73.579	ENSMICG00000027200	THOC1	98	73.579	Microcebus_murinus
ENSSDUG00000016810	thoc1	99	64.055	ENSMOCG00000014924	-	95	63.441	Microtus_ochrogaster
ENSSDUG00000016810	thoc1	99	71.889	ENSMOCG00000014536	-	85	71.889	Microtus_ochrogaster
ENSSDUG00000016810	thoc1	93	92.810	ENSMMOG00000011772	thoc1	100	92.810	Mola_mola
ENSSDUG00000016810	thoc1	99	72.603	ENSMODG00000021482	THOC1	98	72.603	Monodelphis_domestica
ENSSDUG00000016810	thoc1	100	93.578	ENSMALG00000021872	thoc1	100	93.578	Monopterus_albus
ENSSDUG00000016810	thoc1	99	72.657	MGP_CAROLIEiJ_G0021989	Thoc1	98	72.657	Mus_caroli
ENSSDUG00000016810	thoc1	99	72.504	ENSMUSG00000024287	Thoc1	98	72.504	Mus_musculus
ENSSDUG00000016810	thoc1	99	72.504	MGP_PahariEiJ_G0018726	Thoc1	98	72.504	Mus_pahari
ENSSDUG00000016810	thoc1	99	72.504	MGP_SPRETEiJ_G0022905	Thoc1	98	72.504	Mus_spretus
ENSSDUG00000016810	thoc1	99	73.425	ENSMPUG00000005448	THOC1	98	73.425	Mustela_putorius_furo
ENSSDUG00000016810	thoc1	99	72.657	ENSMLUG00000004090	-	98	72.657	Myotis_lucifugus
ENSSDUG00000016810	thoc1	90	67.617	ENSMLUG00000027965	-	99	67.953	Myotis_lucifugus
ENSSDUG00000016810	thoc1	61	67.419	ENSMLUG00000024912	-	100	67.419	Myotis_lucifugus
ENSSDUG00000016810	thoc1	99	73.272	ENSNGAG00000001401	-	98	73.272	Nannospalax_galili
ENSSDUG00000016810	thoc1	97	58.556	ENSNGAG00000008061	-	97	58.556	Nannospalax_galili
ENSSDUG00000016810	thoc1	98	92.163	ENSNBRG00000005991	thoc1	97	92.163	Neolamprologus_brichardi
ENSSDUG00000016810	thoc1	99	73.425	ENSNLEG00000006835	THOC1	98	73.425	Nomascus_leucogenys
ENSSDUG00000016810	thoc1	89	77.730	ENSMEUG00000009756	THOC1	82	77.730	Notamacropus_eugenii
ENSSDUG00000016810	thoc1	99	59.140	ENSOPRG00000001108	THOC1	98	59.140	Ochotona_princeps
ENSSDUG00000016810	thoc1	99	67.742	ENSODEG00000006623	THOC1	98	67.742	Octodon_degus
ENSSDUG00000016810	thoc1	100	94.343	ENSONIG00000009440	thoc1	98	94.470	Oreochromis_niloticus
ENSSDUG00000016810	thoc1	99	73.579	ENSOCUG00000011601	THOC1	98	73.579	Oryctolagus_cuniculus
ENSSDUG00000016810	thoc1	100	93.119	ENSORLG00000017629	thoc1	100	93.119	Oryzias_latipes
ENSSDUG00000016810	thoc1	100	93.272	ENSORLG00020007567	thoc1	100	93.272	Oryzias_latipes_hni
ENSSDUG00000016810	thoc1	100	93.119	ENSORLG00015007356	thoc1	100	93.119	Oryzias_latipes_hsok
ENSSDUG00000016810	thoc1	100	91.896	ENSOMEG00000008200	thoc1	100	91.743	Oryzias_melastigma
ENSSDUG00000016810	thoc1	99	70.353	ENSOGAG00000000470	THOC1	98	70.353	Otolemur_garnettii
ENSSDUG00000016810	thoc1	98	74.455	ENSOARG00000009238	THOC1	96	74.455	Ovis_aries
ENSSDUG00000016810	thoc1	99	73.425	ENSPPAG00000031812	THOC1	98	73.425	Pan_paniscus
ENSSDUG00000016810	thoc1	99	73.272	ENSPPRG00000023794	THOC1	96	79.191	Panthera_pardus
ENSSDUG00000016810	thoc1	99	73.272	ENSPTIG00000007469	THOC1	96	79.191	Panthera_tigris_altaica
ENSSDUG00000016810	thoc1	99	72.492	ENSPTRG00000009816	THOC1	98	72.492	Pan_troglodytes
ENSSDUG00000016810	thoc1	99	72.519	ENSPANG00000008665	THOC1	98	72.519	Papio_anubis
ENSSDUG00000016810	thoc1	100	85.191	ENSPKIG00000005906	thoc1	99	86.086	Paramormyrops_kingsleyae
ENSSDUG00000016810	thoc1	81	76.894	ENSPSIG00000007691	THOC1	97	76.894	Pelodiscus_sinensis
ENSSDUG00000016810	thoc1	94	87.258	ENSPMGG00000008279	thoc1	95	87.258	Periophthalmus_magnuspinnatus
ENSSDUG00000016810	thoc1	99	72.657	ENSPEMG00000021789	Thoc1	98	72.657	Peromyscus_maniculatus_bairdii
ENSSDUG00000016810	thoc1	74	73.211	ENSPCIG00000026942	THOC1	97	73.211	Phascolarctos_cinereus
ENSSDUG00000016810	thoc1	100	90.367	ENSPFOG00000011673	thoc1	100	90.367	Poecilia_formosa
ENSSDUG00000016810	thoc1	100	90.520	ENSPLAG00000019648	thoc1	100	90.520	Poecilia_latipinna
ENSSDUG00000016810	thoc1	100	90.520	ENSPMEG00000007083	thoc1	100	90.520	Poecilia_mexicana
ENSSDUG00000016810	thoc1	100	90.520	ENSPREG00000006719	thoc1	100	90.520	Poecilia_reticulata
ENSSDUG00000016810	thoc1	74	76.955	ENSPPYG00000009049	-	98	76.955	Pongo_abelii
ENSSDUG00000016810	thoc1	91	74.534	ENSPCAG00000005320	THOC1	90	74.534	Procavia_capensis
ENSSDUG00000016810	thoc1	99	72.811	ENSPCOG00000009234	THOC1	98	72.811	Propithecus_coquereli
ENSSDUG00000016810	thoc1	99	72.197	ENSPVAG00000004007	THOC1	98	72.197	Pteropus_vampyrus
ENSSDUG00000016810	thoc1	100	94.343	ENSPNYG00000019152	thoc1	100	94.343	Pundamilia_nyererei
ENSSDUG00000016810	thoc1	99	84.533	ENSPNAG00000023390	thoc1	99	84.227	Pygocentrus_nattereri
ENSSDUG00000016810	thoc1	81	60.777	ENSRNOG00000015332	Thoc1	95	60.777	Rattus_norvegicus
ENSSDUG00000016810	thoc1	99	72.644	ENSRBIG00000033738	THOC1	99	75.043	Rhinopithecus_bieti
ENSSDUG00000016810	thoc1	99	73.425	ENSRROG00000044988	THOC1	96	78.655	Rhinopithecus_roxellana
ENSSDUG00000016810	thoc1	99	73.118	ENSSBOG00000016556	THOC1	98	73.118	Saimiri_boliviensis_boliviensis
ENSSDUG00000016810	thoc1	99	73.579	ENSSHAG00000014829	THOC1	98	73.579	Sarcophilus_harrisii
ENSSDUG00000016810	thoc1	100	87.920	ENSSFOG00015021527	thoc1	100	87.920	Scleropages_formosus
ENSSDUG00000016810	thoc1	100	90.520	ENSSMAG00000018465	thoc1	99	90.520	Scophthalmus_maximus
ENSSDUG00000016810	thoc1	100	99.694	ENSSLDG00000015555	thoc1	100	99.694	Seriola_lalandi_dorsalis
ENSSDUG00000016810	thoc1	87	74.131	ENSSARG00000006910	THOC1	86	74.131	Sorex_araneus
ENSSDUG00000016810	thoc1	98	73.406	ENSSPUG00000007238	THOC1	98	72.923	Sphenodon_punctatus
ENSSDUG00000016810	thoc1	100	89.177	ENSSPAG00000018847	thoc1	99	89.177	Stegastes_partitus
ENSSDUG00000016810	thoc1	99	73.733	ENSSSCG00000025653	THOC1	93	73.733	Sus_scrofa
ENSSDUG00000016810	thoc1	99	74.080	ENSTGUG00000010204	THOC1	99	74.080	Taeniopygia_guttata
ENSSDUG00000016810	thoc1	100	91.284	ENSTRUG00000013518	thoc1	100	91.284	Takifugu_rubripes
ENSSDUG00000016810	thoc1	100	90.673	ENSTNIG00000008473	thoc1	99	90.673	Tetraodon_nigroviridis
ENSSDUG00000016810	thoc1	99	66.359	ENSTBEG00000016920	THOC1	98	66.359	Tupaia_belangeri
ENSSDUG00000016810	thoc1	99	67.588	ENSTTRG00000016664	THOC1	98	67.588	Tursiops_truncatus
ENSSDUG00000016810	thoc1	99	73.579	ENSUAMG00000002527	THOC1	98	73.824	Ursus_americanus
ENSSDUG00000016810	thoc1	99	73.579	ENSUMAG00000019693	THOC1	98	73.579	Ursus_maritimus
ENSSDUG00000016810	thoc1	67	67.347	ENSVPAG00000003726	-	66	67.347	Vicugna_pacos
ENSSDUG00000016810	thoc1	99	73.579	ENSVVUG00000004384	THOC1	98	73.579	Vulpes_vulpes
ENSSDUG00000016810	thoc1	99	70.624	ENSXETG00000003155	thoc1	97	70.624	Xenopus_tropicalis
ENSSDUG00000016810	thoc1	94	85.668	ENSXCOG00000016085	thoc1	89	85.668	Xiphophorus_couchianus
ENSSDUG00000016810	thoc1	100	90.367	ENSXMAG00000002353	thoc1	100	90.367	Xiphophorus_maculatus