EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000016851 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 5178 bases
Position: chrBDQW01002177.1:398344-403521
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000023195	MMR_HSR1	PF01926.23	4.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000023624	-	1590	-	ENSSDUP00000023195	529 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000016851's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000016851's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000016851	-	50	56.777	ENSSDUG00000016775	-	93	56.777
ENSSDUG00000016851	-	70	50.400	ENSSDUG00000005095	-	84	50.667
ENSSDUG00000016851	-	59	78.233	ENSSDUG00000016809	-	76	83.459
ENSSDUG00000016851	-	68	62.568	ENSSDUG00000009253	-	94	61.137
ENSSDUG00000016851	-	90	48.907	ENSSDUG00000016624	-	79	50.497
ENSSDUG00000016851	-	99	46.429	ENSSDUG00000005270	-	97	46.333
ENSSDUG00000016851	-	53	52.878	ENSSDUG00000016459	-	91	60.435

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000016851	-	91	51.451	ENSAPOG00000008987	-	89	53.309	Acanthochromis_polyacanthus
ENSSDUG00000016851	-	83	49.028	ENSAPOG00000009034	-	82	49.891	Acanthochromis_polyacanthus
ENSSDUG00000016851	-	99	50.000	ENSAPOG00000017368	-	91	53.309	Acanthochromis_polyacanthus
ENSSDUG00000016851	-	98	43.284	ENSACIG00000005198	-	92	44.528	Amphilophus_citrinellus
ENSSDUG00000016851	-	50	51.087	ENSACIG00000012718	-	87	68.447	Amphilophus_citrinellus
ENSSDUG00000016851	-	96	42.726	ENSAOCG00000022545	-	95	44.074	Amphiprion_ocellaris
ENSSDUG00000016851	-	100	60.074	ENSAOCG00000001095	-	84	60.813	Amphiprion_ocellaris
ENSSDUG00000016851	-	79	46.604	ENSATEG00000012058	-	90	46.604	Anabas_testudineus
ENSSDUG00000016851	-	60	56.667	ENSATEG00000011735	-	88	56.667	Anabas_testudineus
ENSSDUG00000016851	-	98	57.170	ENSATEG00000011336	-	99	58.302	Anabas_testudineus
ENSSDUG00000016851	-	98	58.254	ENSATEG00000011330	-	99	58.824	Anabas_testudineus
ENSSDUG00000016851	-	98	57.519	ENSATEG00000011352	-	84	57.169	Anabas_testudineus
ENSSDUG00000016851	-	89	45.436	ENSACLG00000005679	-	90	46.450	Astatotilapia_calliptera
ENSSDUG00000016851	-	98	50.649	ENSACLG00000012195	-	96	50.649	Astatotilapia_calliptera
ENSSDUG00000016851	-	98	61.407	ENSACLG00000024857	-	79	61.407	Astatotilapia_calliptera
ENSSDUG00000016851	-	50	62.406	ENSACLG00000024854	-	87	62.406	Astatotilapia_calliptera
ENSSDUG00000016851	-	98	53.803	ENSACLG00000024859	-	84	54.237	Astatotilapia_calliptera
ENSSDUG00000016851	-	71	51.421	ENSACLG00000005220	-	92	51.421	Astatotilapia_calliptera
ENSSDUG00000016851	-	51	53.650	ENSACLG00000005669	-	89	55.512	Astatotilapia_calliptera
ENSSDUG00000016851	-	89	49.388	ENSACLG00000004980	-	81	47.637	Astatotilapia_calliptera
ENSSDUG00000016851	-	56	45.752	ENSAMXG00000030783	-	76	47.368	Astyanax_mexicanus
ENSSDUG00000016851	-	58	43.030	ENSAMXG00000030288	-	69	48.963	Astyanax_mexicanus
ENSSDUG00000016851	-	54	40.068	ENSAMXG00000030715	-	66	41.502	Astyanax_mexicanus
ENSSDUG00000016851	-	98	51.119	ENSCVAG00000018481	-	92	51.306	Cyprinodon_variegatus
ENSSDUG00000016851	-	90	48.582	ENSCVAG00000023267	-	97	48.582	Cyprinodon_variegatus
ENSSDUG00000016851	-	57	42.902	ENSDARG00000086048	si:ch211-229i14.2	77	47.328	Danio_rerio
ENSSDUG00000016851	-	86	50.593	ENSELUG00000015076	si:ch211-229i14.2	85	43.478	Esox_lucius
ENSSDUG00000016851	-	56	45.361	ENSELUG00000015135	-	88	40.295	Esox_lucius
ENSSDUG00000016851	-	54	45.578	ENSELUG00000005405	-	88	41.080	Esox_lucius
ENSSDUG00000016851	-	83	37.397	ENSELUG00000015106	-	79	38.912	Esox_lucius
ENSSDUG00000016851	-	81	44.671	ENSFHEG00000000207	-	76	44.671	Fundulus_heteroclitus
ENSSDUG00000016851	-	100	40.747	ENSFHEG00000013865	-	96	40.989	Fundulus_heteroclitus
ENSSDUG00000016851	-	82	46.067	ENSFHEG00000011334	-	88	45.169	Fundulus_heteroclitus
ENSSDUG00000016851	-	100	41.516	ENSFHEG00000019202	-	94	42.569	Fundulus_heteroclitus
ENSSDUG00000016851	-	98	47.610	ENSGAFG00000015999	-	92	47.794	Gambusia_affinis
ENSSDUG00000016851	-	97	38.235	ENSGAFG00000001852	-	94	38.447	Gambusia_affinis
ENSSDUG00000016851	-	99	50.741	ENSGAFG00000015917	-	93	49.265	Gambusia_affinis
ENSSDUG00000016851	-	98	39.332	ENSGAFG00000015908	-	78	38.309	Gambusia_affinis
ENSSDUG00000016851	-	72	44.416	ENSGACG00000013107	-	90	44.310	Gasterosteus_aculeatus
ENSSDUG00000016851	-	86	50.418	ENSHBUG00000013269	-	92	48.577	Haplochromis_burtoni
ENSSDUG00000016851	-	50	52.985	ENSHBUG00000011156	-	82	53.992	Haplochromis_burtoni
ENSSDUG00000016851	-	98	51.622	ENSHBUG00000011672	-	82	50.400	Haplochromis_burtoni
ENSSDUG00000016851	-	98	43.580	ENSHBUG00000020633	-	95	44.485	Haplochromis_burtoni
ENSSDUG00000016851	-	100	54.898	ENSHBUG00000003015	-	99	54.898	Haplochromis_burtoni
ENSSDUG00000016851	-	98	51.020	ENSHBUG00000010247	-	94	51.020	Haplochromis_burtoni
ENSSDUG00000016851	-	78	37.310	ENSIPUG00000004161	-	60	45.318	Ictalurus_punctatus
ENSSDUG00000016851	-	99	41.055	ENSKMAG00000010851	-	93	40.643	Kryptolebias_marmoratus
ENSSDUG00000016851	-	99	50.556	ENSKMAG00000010293	-	94	53.028	Kryptolebias_marmoratus
ENSSDUG00000016851	-	55	53.952	ENSLBEG00000010625	-	91	55.072	Labrus_bergylta
ENSSDUG00000016851	-	66	51.099	ENSLBEG00000012647	-	77	52.066	Labrus_bergylta
ENSSDUG00000016851	-	63	52.312	ENSLBEG00000022878	-	90	53.179	Labrus_bergylta
ENSSDUG00000016851	-	98	51.515	ENSMAMG00000017884	-	98	52.542	Mastacembelus_armatus
ENSSDUG00000016851	-	98	52.863	ENSMAMG00000017849	-	98	53.537	Mastacembelus_armatus
ENSSDUG00000016851	-	70	46.175	ENSMAMG00000018061	-	91	45.528	Mastacembelus_armatus
ENSSDUG00000016851	-	98	49.237	ENSMAMG00000017906	-	98	49.713	Mastacembelus_armatus
ENSSDUG00000016851	-	99	50.186	ENSMAMG00000018175	-	89	51.673	Mastacembelus_armatus
ENSSDUG00000016851	-	90	50.588	ENSMAMG00000018170	-	98	50.392	Mastacembelus_armatus
ENSSDUG00000016851	-	74	51.733	ENSMAMG00000018162	si:ch211-229i14.2	86	52.475	Mastacembelus_armatus
ENSSDUG00000016851	-	53	63.958	ENSMZEG00005021732	-	72	70.124	Maylandia_zebra
ENSSDUG00000016851	-	50	62.406	ENSMZEG00005021723	-	82	62.406	Maylandia_zebra
ENSSDUG00000016851	-	81	57.437	ENSMZEG00005028364	-	89	57.437	Maylandia_zebra
ENSSDUG00000016851	-	76	53.623	ENSMALG00000001082	-	89	45.927	Monopterus_albus
ENSSDUG00000016851	-	71	45.646	ENSMALG00000004282	-	92	45.789	Monopterus_albus
ENSSDUG00000016851	-	80	49.433	ENSNBRG00000003245	-	79	51.230	Neolamprologus_brichardi
ENSSDUG00000016851	-	99	57.063	ENSNBRG00000014894	-	94	57.063	Neolamprologus_brichardi
ENSSDUG00000016851	-	50	57.621	ENSONIG00000012315	-	88	58.242	Oreochromis_niloticus
ENSSDUG00000016851	-	79	52.518	ENSONIG00000010736	-	93	52.758	Oreochromis_niloticus
ENSSDUG00000016851	-	75	47.545	ENSONIG00000011313	-	95	46.954	Oreochromis_niloticus
ENSSDUG00000016851	-	71	47.297	ENSONIG00000013863	-	92	47.425	Oreochromis_niloticus
ENSSDUG00000016851	-	79	51.079	ENSONIG00000004482	-	97	66.148	Oreochromis_niloticus
ENSSDUG00000016851	-	98	50.189	ENSORLG00000017091	-	95	50.189	Oryzias_latipes
ENSSDUG00000016851	-	82	43.207	ENSORLG00000030459	-	89	43.237	Oryzias_latipes
ENSSDUG00000016851	-	83	42.140	ENSORLG00020014225	-	87	42.140	Oryzias_latipes_hni
ENSSDUG00000016851	-	98	49.245	ENSORLG00020016100	-	95	49.245	Oryzias_latipes_hni
ENSSDUG00000016851	-	98	49.906	ENSORLG00015006787	-	95	49.906	Oryzias_latipes_hsok
ENSSDUG00000016851	-	95	43.217	ENSOMEG00000007494	-	90	43.714	Oryzias_melastigma
ENSSDUG00000016851	-	83	43.653	ENSOMEG00000009393	-	83	42.404	Oryzias_melastigma
ENSSDUG00000016851	-	98	49.248	ENSOMEG00000003632	-	96	49.248	Oryzias_melastigma
ENSSDUG00000016851	-	56	32.381	ENSOMEG00000004883	-	67	32.701	Oryzias_melastigma
ENSSDUG00000016851	-	77	47.294	ENSPFOG00000022293	-	93	47.765	Poecilia_formosa
ENSSDUG00000016851	-	99	49.153	ENSPFOG00000000973	-	89	49.623	Poecilia_formosa
ENSSDUG00000016851	-	90	47.154	ENSPFOG00000024835	-	90	46.626	Poecilia_formosa
ENSSDUG00000016851	-	75	44.472	ENSPFOG00000001388	-	81	44.363	Poecilia_formosa
ENSSDUG00000016851	-	84	45.299	ENSPLAG00000015541	-	89	44.043	Poecilia_latipinna
ENSSDUG00000016851	-	99	40.608	ENSPMEG00000002123	-	94	41.145	Poecilia_mexicana
ENSSDUG00000016851	-	99	49.632	ENSPMEG00000010900	-	92	49.816	Poecilia_mexicana
ENSSDUG00000016851	-	84	45.513	ENSPMEG00000003917	-	86	44.255	Poecilia_mexicana
ENSSDUG00000016851	-	81	48.879	ENSPMEG00000008599	-	89	49.552	Poecilia_mexicana
ENSSDUG00000016851	-	86	46.336	ENSPREG00000017000	-	92	48.077	Poecilia_reticulata
ENSSDUG00000016851	-	67	48.179	ENSPREG00000006470	-	93	47.090	Poecilia_reticulata
ENSSDUG00000016851	-	90	49.719	ENSPREG00000017086	-	74	48.942	Poecilia_reticulata
ENSSDUG00000016851	-	84	45.336	ENSPREG00000017114	-	87	44.589	Poecilia_reticulata
ENSSDUG00000016851	-	90	44.444	ENSPNYG00000006913	-	93	46.200	Pundamilia_nyererei
ENSSDUG00000016851	-	98	56.144	ENSPNYG00000008570	-	96	55.955	Pundamilia_nyererei
ENSSDUG00000016851	-	98	54.664	ENSPNYG00000008493	-	99	55.473	Pundamilia_nyererei
ENSSDUG00000016851	-	61	49.697	ENSPNYG00000003568	-	92	50.418	Pundamilia_nyererei
ENSSDUG00000016851	-	83	52.632	ENSPNYG00000000712	-	87	52.632	Pundamilia_nyererei
ENSSDUG00000016851	-	58	51.111	ENSPNYG00000004195	-	89	50.794	Pundamilia_nyererei
ENSSDUG00000016851	-	57	44.514	ENSPNAG00000003364	si:ch211-229i14.2	76	38.280	Pygocentrus_nattereri
ENSSDUG00000016851	-	53	47.405	ENSPNAG00000026011	-	63	40.284	Pygocentrus_nattereri
ENSSDUG00000016851	-	61	51.976	ENSSLDG00000013126	-	93	52.888	Seriola_lalandi_dorsalis
ENSSDUG00000016851	-	98	59.962	ENSSLDG00000001533	-	98	59.962	Seriola_lalandi_dorsalis
ENSSDUG00000016851	-	60	46.749	ENSSLDG00000007022	-	69	51.460	Seriola_lalandi_dorsalis
ENSSDUG00000016851	-	98	53.172	ENSSPAG00000001386	-	95	53.172	Stegastes_partitus
ENSSDUG00000016851	-	83	53.111	ENSSPAG00000005977	-	99	52.889	Stegastes_partitus
ENSSDUG00000016851	-	98	47.566	ENSTRUG00000020623	-	97	47.486	Takifugu_rubripes
ENSSDUG00000016851	-	98	42.004	ENSTRUG00000025882	-	65	41.333	Takifugu_rubripes
ENSSDUG00000016851	-	50	60.985	ENSXCOG00000018711	-	82	65.690	Xiphophorus_couchianus
ENSSDUG00000016851	-	98	48.983	ENSXMAG00000019889	-	89	48.983	Xiphophorus_maculatus
ENSSDUG00000016851	-	99	48.440	ENSXMAG00000027923	-	90	49.358	Xiphophorus_maculatus