EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000016896 (Gene tree)
Gene ID: 111230262
Gene Symbol: tufm
Alias: fi06f04|wu:fi06f04|zgc:110766
Full Name: Tu translation elongation factor%2C mitochondrial
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 8304 bases
Position: chrBDQW01000260.1:1996608-2004911
Accession: 111230262
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000023272	GTP_EFTU	PF00009.27	1.5e-55	1	1
ENSSDUP00000023300	GTP_EFTU	PF00009.27	1.6e-55	1	1
ENSSDUP00000023272	GTP_EFTU_D2	PF03144.25	3.8e-14	1	1
ENSSDUP00000023300	GTP_EFTU_D2	PF03144.25	4.1e-14	1	1
ENSSDUP00000023300	GTP_EFTU_D3	PF03143.17	7.9e-26	1	1
ENSSDUP00000023272	GTP_EFTU_D3	PF03143.17	9.8e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000023704	-	2968	XM_022756931	ENSSDUP00000023272	446 (aa)	XP_022612652	UPI000BBE7FDA
ENSSDUT00000023733	-	1380	-	ENSSDUP00000023300	459 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000016896's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000016896's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000016896	tufm	87	30.290	ENSSDUG00000004897	eef1a1b	95	30.134
ENSSDUG00000016896	tufm	87	30.310	ENSSDUG00000008198	-	95	30.310
ENSSDUG00000016896	tufm	87	30.512	ENSSDUG00000020050	EEF1A1	95	30.357
ENSSDUG00000016896	tufm	87	30.155	ENSSDUG00000008223	-	95	30.155
ENSSDUG00000016896	tufm	87	30.425	ENSSDUG00000009163	si:dkey-37o8.1	96	30.425

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000016896	tufm	92	77.913	ENSG00000178952	TUFM	92	77.512	Homo_sapiens
ENSSDUG00000016896	tufm	100	95.740	ENSAPOG00000013385	tufm	100	95.740	Acanthochromis_polyacanthus
ENSSDUG00000016896	tufm	93	78.417	ENSAMEG00000015551	TUFM	92	78.417	Ailuropoda_melanoleuca
ENSSDUG00000016896	tufm	97	91.686	ENSACIG00000007388	tufm	96	93.780	Amphilophus_citrinellus
ENSSDUG00000016896	tufm	100	95.291	ENSAOCG00000001032	tufm	100	95.291	Amphiprion_ocellaris
ENSSDUG00000016896	tufm	100	95.291	ENSAPEG00000015751	tufm	100	95.291	Amphiprion_percula
ENSSDUG00000016896	tufm	100	93.274	ENSATEG00000002905	tufm	97	93.274	Anabas_testudineus
ENSSDUG00000016896	tufm	99	74.723	ENSACAG00000005399	TUFM	89	80.244	Anolis_carolinensis
ENSSDUG00000016896	tufm	99	72.727	ENSANAG00000022206	TUFM	92	75.779	Aotus_nancymaae
ENSSDUG00000016896	tufm	100	95.067	ENSACLG00000007403	tufm	93	95.067	Astatotilapia_calliptera
ENSSDUG00000016896	tufm	99	74.945	ENSBTAG00000019216	TUFM	92	78.177	Bos_taurus
ENSSDUG00000016896	tufm	90	57.702	WBGene00007000	tufm-1	82	57.702	Caenorhabditis_elegans
ENSSDUG00000016896	tufm	99	73.171	ENSCJAG00000006236	TUFM	92	76.019	Callithrix_jacchus
ENSSDUG00000016896	tufm	99	75.388	ENSCAFG00000017216	TUFM	92	78.417	Canis_familiaris
ENSSDUG00000016896	tufm	99	75.388	ENSCAFG00020017574	TUFM	92	78.417	Canis_lupus_dingo
ENSSDUG00000016896	tufm	99	75.166	ENSCHIG00000020583	TUFM	92	78.417	Capra_hircus
ENSSDUG00000016896	tufm	100	75.664	ENSTSYG00000026053	TUFM	93	78.147	Carlito_syrichta
ENSSDUG00000016896	tufm	99	75.388	ENSCPOG00000010534	TUFM	93	78.520	Cavia_porcellus
ENSSDUG00000016896	tufm	99	72.949	ENSCCAG00000033296	TUFM	92	75.779	Cebus_capucinus
ENSSDUG00000016896	tufm	99	74.279	ENSCATG00000035822	TUFM	92	77.458	Cercocebus_atys
ENSSDUG00000016896	tufm	99	75.166	ENSCLAG00000013969	TUFM	92	78.795	Chinchilla_lanigera
ENSSDUG00000016896	tufm	99	73.392	ENSCSAG00000006314	TUFM	92	76.978	Chlorocebus_sabaeus
ENSSDUG00000016896	tufm	100	75.664	ENSCHOG00000009077	TUFM	92	78.947	Choloepus_hoffmanni
ENSSDUG00000016896	tufm	99	78.076	ENSCPBG00000003874	TUFM	91	81.190	Chrysemys_picta_bellii
ENSSDUG00000016896	tufm	91	59.158	ENSCING00000002841	-	94	59.158	Ciona_intestinalis
ENSSDUG00000016896	tufm	90	60.000	ENSCSAVG00000009380	-	86	60.000	Ciona_savignyi
ENSSDUG00000016896	tufm	100	73.836	ENSCANG00000035829	TUFM	98	73.649	Colobus_angolensis_palliatus
ENSSDUG00000016896	tufm	99	74.279	ENSCGRG00001022949	Tufm	92	77.458	Cricetulus_griseus_chok1gshd
ENSSDUG00000016896	tufm	99	74.279	ENSCGRG00000001868	-	92	77.458	Cricetulus_griseus_crigri
ENSSDUG00000016896	tufm	92	54.217	ENSCGRG00000013193	-	91	54.217	Cricetulus_griseus_crigri
ENSSDUG00000016896	tufm	100	87.892	ENSCSEG00000013841	tufm	100	87.892	Cynoglossus_semilaevis
ENSSDUG00000016896	tufm	100	95.740	ENSCVAG00000006251	tufm	100	95.740	Cyprinodon_variegatus
ENSSDUG00000016896	tufm	100	84.753	ENSDARG00000104173	tufm	99	84.753	Danio_rerio
ENSSDUG00000016896	tufm	100	73.673	ENSDNOG00000047636	TUFM	92	76.794	Dasypus_novemcinctus
ENSSDUG00000016896	tufm	94	63.507	ENSDORG00000023544	-	89	68.097	Dipodomys_ordii
ENSSDUG00000016896	tufm	90	70.000	FBgn0024556	mEFTu1	83	69.042	Drosophila_melanogaster
ENSSDUG00000016896	tufm	80	65.634	ENSETEG00000009601	TUFM	89	65.634	Echinops_telfairi
ENSSDUG00000016896	tufm	96	67.785	ENSEBUG00000015907	tufm	73	68.456	Eptatretus_burgeri
ENSSDUG00000016896	tufm	99	75.778	ENSEASG00005015477	TUFM	91	79.075	Equus_asinus_asinus
ENSSDUG00000016896	tufm	99	75.778	ENSECAG00000019763	TUFM	91	79.075	Equus_caballus
ENSSDUG00000016896	tufm	80	77.746	ENSEEUG00000001402	TUFM	89	77.746	Erinaceus_europaeus
ENSSDUG00000016896	tufm	100	89.955	ENSELUG00000013410	tufm	96	89.955	Esox_lucius
ENSSDUG00000016896	tufm	96	76.566	ENSFCAG00000003103	TUFM	60	78.177	Felis_catus
ENSSDUG00000016896	tufm	89	73.869	ENSFDAG00000010881	TUFM	99	74.921	Fukomys_damarensis
ENSSDUG00000016896	tufm	94	87.321	ENSFHEG00000020646	tufm	98	83.747	Fundulus_heteroclitus
ENSSDUG00000016896	tufm	100	89.910	ENSGMOG00000014616	tufm	100	89.910	Gadus_morhua
ENSSDUG00000016896	tufm	100	94.170	ENSGAFG00000004682	tufm	100	94.170	Gambusia_affinis
ENSSDUG00000016896	tufm	100	91.480	ENSGACG00000012961	tufm	100	91.480	Gasterosteus_aculeatus
ENSSDUG00000016896	tufm	99	78.864	ENSGAGG00000006132	TUFM	99	81.638	Gopherus_agassizii
ENSSDUG00000016896	tufm	92	77.913	ENSGGOG00000014136	TUFM	92	77.512	Gorilla_gorilla
ENSSDUG00000016896	tufm	100	95.516	ENSHBUG00000019031	tufm	93	95.516	Haplochromis_burtoni
ENSSDUG00000016896	tufm	100	73.230	ENSHGLG00000006613	TUFM	94	76.291	Heterocephalus_glaber_female
ENSSDUG00000016896	tufm	100	69.690	ENSHGLG00100004096	TUFM	94	72.535	Heterocephalus_glaber_male
ENSSDUG00000016896	tufm	99	92.135	ENSHCOG00000014418	tufm	99	92.135	Hippocampus_comes
ENSSDUG00000016896	tufm	95	46.101	ENSIPUG00000020682	-	91	54.717	Ictalurus_punctatus
ENSSDUG00000016896	tufm	100	86.771	ENSIPUG00000022457	tufm	100	86.771	Ictalurus_punctatus
ENSSDUG00000016896	tufm	99	75.388	ENSSTOG00000011837	TUFM	92	78.657	Ictidomys_tridecemlineatus
ENSSDUG00000016896	tufm	99	74.165	ENSJJAG00000011840	Tufm	92	77.885	Jaculus_jaculus
ENSSDUG00000016896	tufm	100	89.910	ENSKMAG00000009794	tufm	100	89.910	Kryptolebias_marmoratus
ENSSDUG00000016896	tufm	100	91.031	ENSLBEG00000023735	tufm	100	91.031	Labrus_bergylta
ENSSDUG00000016896	tufm	97	80.876	ENSLACG00000008242	TUFM	94	81.499	Latimeria_chalumnae
ENSSDUG00000016896	tufm	93	74.880	ENSLAFG00000028911	TUFM	100	70.796	Loxodonta_africana
ENSSDUG00000016896	tufm	100	74.336	ENSMFAG00000033739	TUFM	92	77.512	Macaca_fascicularis
ENSSDUG00000016896	tufm	100	74.336	ENSMMUG00000003303	TUFM	92	77.512	Macaca_mulatta
ENSSDUG00000016896	tufm	100	74.336	ENSMNEG00000006031	TUFM	92	77.512	Macaca_nemestrina
ENSSDUG00000016896	tufm	99	74.279	ENSMLEG00000042133	TUFM	92	77.458	Mandrillus_leucophaeus
ENSSDUG00000016896	tufm	100	92.825	ENSMAMG00000002053	tufm	100	92.825	Mastacembelus_armatus
ENSSDUG00000016896	tufm	100	95.291	ENSMZEG00005010857	tufm	93	95.291	Maylandia_zebra
ENSSDUG00000016896	tufm	99	74.723	ENSMAUG00000010490	Tufm	92	77.938	Mesocricetus_auratus
ENSSDUG00000016896	tufm	99	74.058	ENSMICG00000007650	TUFM	92	77.458	Microcebus_murinus
ENSSDUG00000016896	tufm	99	74.501	ENSMOCG00000010051	Tufm	92	77.458	Microtus_ochrogaster
ENSSDUG00000016896	tufm	96	90.972	ENSMMOG00000012344	tufm	93	92.823	Mola_mola
ENSSDUG00000016896	tufm	97	76.852	ENSMODG00000015564	TUFM	92	78.657	Monodelphis_domestica
ENSSDUG00000016896	tufm	100	90.135	ENSMALG00000020254	tufm	100	90.135	Monopterus_albus
ENSSDUG00000016896	tufm	99	74.723	MGP_CAROLIEiJ_G0030449	-	92	77.938	Mus_caroli
ENSSDUG00000016896	tufm	99	74.723	MGP_CAROLIEiJ_G0030448	-	98	80.702	Mus_caroli
ENSSDUG00000016896	tufm	99	74.723	ENSMUSG00000073838	Tufm	98	80.702	Mus_musculus
ENSSDUG00000016896	tufm	99	74.945	MGP_PahariEiJ_G0013658	-	98	80.702	Mus_pahari
ENSSDUG00000016896	tufm	99	74.945	MGP_PahariEiJ_G0013659	-	92	78.177	Mus_pahari
ENSSDUG00000016896	tufm	99	74.945	MGP_SPRETEiJ_G0031562	-	98	81.579	Mus_spretus
ENSSDUG00000016896	tufm	99	69.262	MGP_SPRETEiJ_G0031563	-	93	71.806	Mus_spretus
ENSSDUG00000016896	tufm	81	78.297	ENSMPUG00000012816	TUFM	98	78.108	Mustela_putorius_furo
ENSSDUG00000016896	tufm	99	74.279	ENSMLUG00000012335	-	92	77.698	Myotis_lucifugus
ENSSDUG00000016896	tufm	99	74.723	ENSNGAG00000008610	Tufm	92	78.177	Nannospalax_galili
ENSSDUG00000016896	tufm	100	81.390	ENSNBRG00000006466	tufm	96	95.304	Neolamprologus_brichardi
ENSSDUG00000016896	tufm	100	69.536	ENSNLEG00000011063	TUFM	92	72.315	Nomascus_leucogenys
ENSSDUG00000016896	tufm	78	80.115	ENSMEUG00000011131	TUFM	100	80.115	Notamacropus_eugenii
ENSSDUG00000016896	tufm	99	64.955	ENSOPRG00000002318	-	91	67.626	Ochotona_princeps
ENSSDUG00000016896	tufm	100	95.516	ENSONIG00000019389	tufm	100	95.516	Oreochromis_niloticus
ENSSDUG00000016896	tufm	93	80.482	ENSOANG00000013114	TUFM	95	80.482	Ornithorhynchus_anatinus
ENSSDUG00000016896	tufm	93	78.657	ENSOCUG00000002683	TUFM	91	78.657	Oryctolagus_cuniculus
ENSSDUG00000016896	tufm	100	94.843	ENSORLG00000011497	tufm	100	94.843	Oryzias_latipes
ENSSDUG00000016896	tufm	100	95.067	ENSORLG00020013437	tufm	100	95.067	Oryzias_latipes_hni
ENSSDUG00000016896	tufm	100	95.067	ENSORLG00015003107	tufm	100	95.067	Oryzias_latipes_hsok
ENSSDUG00000016896	tufm	100	95.516	ENSOMEG00000016958	tufm	100	95.516	Oryzias_melastigma
ENSSDUG00000016896	tufm	99	74.279	ENSOGAG00000006875	TUFM	93	77.327	Otolemur_garnettii
ENSSDUG00000016896	tufm	90	79.353	ENSOARG00000002357	TUFM	97	79.353	Ovis_aries
ENSSDUG00000016896	tufm	92	77.913	ENSPPAG00000035168	TUFM	92	77.512	Pan_paniscus
ENSSDUG00000016896	tufm	93	78.177	ENSPPRG00000014248	TUFM	92	78.177	Panthera_pardus
ENSSDUG00000016896	tufm	93	77.938	ENSPTIG00000009980	TUFM	98	77.938	Panthera_tigris_altaica
ENSSDUG00000016896	tufm	92	77.913	ENSPTRG00000007939	TUFM	92	77.512	Pan_troglodytes
ENSSDUG00000016896	tufm	100	74.115	ENSPANG00000019624	TUFM	92	77.273	Papio_anubis
ENSSDUG00000016896	tufm	100	85.268	ENSPKIG00000023809	tufm	98	83.482	Paramormyrops_kingsleyae
ENSSDUG00000016896	tufm	71	78.730	ENSPSIG00000005302	TUFM	100	78.730	Pelodiscus_sinensis
ENSSDUG00000016896	tufm	94	92.105	ENSPMGG00000015631	tufm	99	92.105	Periophthalmus_magnuspinnatus
ENSSDUG00000016896	tufm	99	74.501	ENSPEMG00000012208	Tufm	92	77.458	Peromyscus_maniculatus_bairdii
ENSSDUG00000016896	tufm	99	73.846	ENSPCIG00000025208	TUFM	91	77.698	Phascolarctos_cinereus
ENSSDUG00000016896	tufm	100	91.480	ENSPFOG00000007043	tufm	100	91.480	Poecilia_formosa
ENSSDUG00000016896	tufm	98	88.991	ENSPLAG00000014372	tufm	94	91.148	Poecilia_latipinna
ENSSDUG00000016896	tufm	100	91.704	ENSPMEG00000019508	tufm	100	91.704	Poecilia_mexicana
ENSSDUG00000016896	tufm	100	89.509	ENSPMEG00000014520	-	100	89.686	Poecilia_mexicana
ENSSDUG00000016896	tufm	100	92.152	ENSPREG00000013913	tufm	100	92.152	Poecilia_reticulata
ENSSDUG00000016896	tufm	99	73.836	ENSPPYG00000007226	TUFM	92	76.978	Pongo_abelii
ENSSDUG00000016896	tufm	97	68.212	ENSPCAG00000015294	TUFM	93	72.038	Procavia_capensis
ENSSDUG00000016896	tufm	99	73.836	ENSPCOG00000012267	TUFM	92	77.218	Propithecus_coquereli
ENSSDUG00000016896	tufm	99	95.721	ENSPNYG00000008905	tufm	100	95.721	Pundamilia_nyererei
ENSSDUG00000016896	tufm	100	89.910	ENSPNAG00000018881	tufm	100	89.910	Pygocentrus_nattereri
ENSSDUG00000016896	tufm	99	74.945	ENSRNOG00000018604	Tufm	92	78.177	Rattus_norvegicus
ENSSDUG00000016896	tufm	96	73.103	ENSRBIG00000042008	-	96	72.897	Rhinopithecus_bieti
ENSSDUG00000016896	tufm	58	76.654	ENSRBIG00000036713	-	94	76.654	Rhinopithecus_bieti
ENSSDUG00000016896	tufm	60	75.836	ENSRROG00000044977	-	80	71.186	Rhinopithecus_roxellana
ENSSDUG00000016896	tufm	100	74.279	ENSRROG00000036858	-	98	74.099	Rhinopithecus_roxellana
ENSSDUG00000016896	tufm	98	57.955	YOR187W	TUF1	95	59.233	Saccharomyces_cerevisiae
ENSSDUG00000016896	tufm	98	74.260	ENSSBOG00000026542	TUFM	93	76.499	Saimiri_boliviensis_boliviensis
ENSSDUG00000016896	tufm	98	76.835	ENSSHAG00000012121	TUFM	97	79.137	Sarcophilus_harrisii
ENSSDUG00000016896	tufm	100	85.938	ENSSFOG00015013352	tufm	100	84.821	Scleropages_formosus
ENSSDUG00000016896	tufm	100	94.395	ENSSMAG00000010053	tufm	100	94.395	Scophthalmus_maximus
ENSSDUG00000016896	tufm	100	99.327	ENSSLDG00000006494	tufm	100	99.327	Seriola_lalandi_dorsalis
ENSSDUG00000016896	tufm	84	76.596	ENSSARG00000011228	TUFM	96	78.022	Sorex_araneus
ENSSDUG00000016896	tufm	96	70.233	ENSSPUG00000016312	TUFM	96	71.292	Sphenodon_punctatus
ENSSDUG00000016896	tufm	100	92.825	ENSSPAG00000009936	tufm	99	92.825	Stegastes_partitus
ENSSDUG00000016896	tufm	99	75.166	ENSSSCG00000007803	TUFM	92	78.177	Sus_scrofa
ENSSDUG00000016896	tufm	100	91.031	ENSTRUG00000008300	tufm	100	91.031	Takifugu_rubripes
ENSSDUG00000016896	tufm	99	71.806	ENSTBEG00000015029	TUFM	91	76.019	Tupaia_belangeri
ENSSDUG00000016896	tufm	58	77.432	ENSTTRG00000005930	-	57	77.432	Tursiops_truncatus
ENSSDUG00000016896	tufm	62	78.182	ENSTTRG00000001980	-	100	78.182	Tursiops_truncatus
ENSSDUG00000016896	tufm	100	75.000	ENSUAMG00000001471	TUFM	94	77.230	Ursus_americanus
ENSSDUG00000016896	tufm	91	79.557	ENSUMAG00000009341	TUFM	99	79.557	Ursus_maritimus
ENSSDUG00000016896	tufm	62	77.455	ENSVPAG00000009541	TUFM	100	77.455	Vicugna_pacos
ENSSDUG00000016896	tufm	99	75.388	ENSVVUG00000024170	TUFM	92	78.177	Vulpes_vulpes
ENSSDUG00000016896	tufm	84	53.704	ENSXETG00000028019	-	78	90.426	Xenopus_tropicalis
ENSSDUG00000016896	tufm	98	92.414	ENSXMAG00000011848	tufm	96	94.737	Xiphophorus_maculatus