EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000016921 (Gene tree)
Gene ID: 111238103
Gene Symbol: rrp7a
Alias: zgc:110084
Full Name: ribosomal RNA processing 7 homolog A
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 6059 bases
Position: chrBDQW01001191.1:312729-318787
Accession: 111238103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000023276	RRP7	PF12923.7	1.8e-32	1	1
ENSSDUP00000023276	RRM_1	PF00076.22	2.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000023709	-	5236	XM_022767504	ENSSDUP00000023276	282 (aa)	XP_022623225	UPI000BBF3A74

Gene Model

Click here to download ENSSDUG00000016921's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000016921's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000016921	rrp7a	94	49.248	ENSG00000189306	RRP7A	93	49.248	Homo_sapiens
ENSSDUG00000016921	rrp7a	100	82.624	ENSAPOG00000021250	rrp7a	100	82.624	Acanthochromis_polyacanthus
ENSSDUG00000016921	rrp7a	99	50.000	ENSAMEG00000009503	RRP7A	98	49.643	Ailuropoda_melanoleuca
ENSSDUG00000016921	rrp7a	100	83.392	ENSACIG00000023067	rrp7a	100	83.392	Amphilophus_citrinellus
ENSSDUG00000016921	rrp7a	100	85.106	ENSAOCG00000004115	rrp7a	100	85.106	Amphiprion_ocellaris
ENSSDUG00000016921	rrp7a	100	85.461	ENSAPEG00000013688	rrp7a	100	85.461	Amphiprion_percula
ENSSDUG00000016921	rrp7a	100	84.397	ENSATEG00000009664	rrp7a	100	84.397	Anabas_testudineus
ENSSDUG00000016921	rrp7a	99	49.645	ENSACAG00000003579	RRP7A	99	49.645	Anolis_carolinensis
ENSSDUG00000016921	rrp7a	94	49.248	ENSANAG00000031200	RRP7A	93	49.248	Aotus_nancymaae
ENSSDUG00000016921	rrp7a	100	85.461	ENSACLG00000016790	rrp7a	100	85.461	Astatotilapia_calliptera
ENSSDUG00000016921	rrp7a	100	67.730	ENSAMXG00000007921	rrp7a	96	67.730	Astyanax_mexicanus
ENSSDUG00000016921	rrp7a	94	48.864	ENSBTAG00000016510	RRP7A	93	49.242	Bos_taurus
ENSSDUG00000016921	rrp7a	94	50.000	ENSCJAG00000009668	RRP7A	93	50.000	Callithrix_jacchus
ENSSDUG00000016921	rrp7a	94	50.376	ENSCAFG00000000965	RRP7	100	49.123	Canis_familiaris
ENSSDUG00000016921	rrp7a	94	50.376	ENSCAFG00020000251	RRP7A	100	49.123	Canis_lupus_dingo
ENSSDUG00000016921	rrp7a	94	48.864	ENSCHIG00000026787	RRP7A	93	49.242	Capra_hircus
ENSSDUG00000016921	rrp7a	94	47.368	ENSTSYG00000000198	RRP7A	93	47.744	Carlito_syrichta
ENSSDUG00000016921	rrp7a	94	48.120	ENSCAPG00000002325	RRP7A	100	48.120	Cavia_aperea
ENSSDUG00000016921	rrp7a	100	46.831	ENSCPOG00000030547	RRP7A	99	47.183	Cavia_porcellus
ENSSDUG00000016921	rrp7a	74	51.442	ENSCCAG00000021486	RRP7A	88	51.442	Cebus_capucinus
ENSSDUG00000016921	rrp7a	100	47.719	ENSCLAG00000016715	RRP7A	100	48.070	Chinchilla_lanigera
ENSSDUG00000016921	rrp7a	94	49.248	ENSCSAG00000005657	RRP7A	93	49.248	Chlorocebus_sabaeus
ENSSDUG00000016921	rrp7a	100	49.117	ENSCPBG00000021814	RRP7A	100	49.296	Chrysemys_picta_bellii
ENSSDUG00000016921	rrp7a	80	34.914	ENSCSAVG00000002555	-	85	35.065	Ciona_savignyi
ENSSDUG00000016921	rrp7a	64	75.000	ENSCGRG00001021873	-	93	75.000	Cricetulus_griseus_chok1gshd
ENSSDUG00000016921	rrp7a	82	45.923	ENSCGRG00001005713	-	99	46.352	Cricetulus_griseus_chok1gshd
ENSSDUG00000016921	rrp7a	98	48.188	ENSCGRG00000009567	-	96	48.188	Cricetulus_griseus_crigri
ENSSDUG00000016921	rrp7a	100	42.807	ENSCGRG00000000552	-	95	43.885	Cricetulus_griseus_crigri
ENSSDUG00000016921	rrp7a	92	43.346	ENSCGRG00000000540	-	100	43.726	Cricetulus_griseus_crigri
ENSSDUG00000016921	rrp7a	100	78.369	ENSCSEG00000007185	rrp7a	100	78.369	Cynoglossus_semilaevis
ENSSDUG00000016921	rrp7a	100	77.660	ENSCVAG00000004349	rrp7a	100	77.660	Cyprinodon_variegatus
ENSSDUG00000016921	rrp7a	100	60.563	ENSDARG00000098934	rrp7a	100	60.563	Danio_rerio
ENSSDUG00000016921	rrp7a	94	50.000	ENSDNOG00000037442	RRP7A	86	50.000	Dasypus_novemcinctus
ENSSDUG00000016921	rrp7a	100	46.831	ENSDORG00000016138	Rrp7a	100	46.831	Dipodomys_ordii
ENSSDUG00000016921	rrp7a	94	34.672	FBgn0031764	CG9107	98	32.234	Drosophila_melanogaster
ENSSDUG00000016921	rrp7a	92	49.615	ENSETEG00000018025	RRP7A	100	48.846	Echinops_telfairi
ENSSDUG00000016921	rrp7a	100	41.115	ENSEBUG00000010231	rrp7a	98	40.418	Eptatretus_burgeri
ENSSDUG00000016921	rrp7a	94	49.248	ENSEASG00005000804	RRP7A	93	49.813	Equus_asinus_asinus
ENSSDUG00000016921	rrp7a	94	50.000	ENSECAG00000015168	RRP7	93	50.562	Equus_caballus
ENSSDUG00000016921	rrp7a	100	72.695	ENSELUG00000009036	rrp7a	100	72.695	Esox_lucius
ENSSDUG00000016921	rrp7a	97	49.270	ENSFCAG00000033258	RRP7A	76	49.091	Felis_catus
ENSSDUG00000016921	rrp7a	92	50.192	ENSFALG00000011635	RRP7A	88	49.624	Ficedula_albicollis
ENSSDUG00000016921	rrp7a	94	50.000	ENSFDAG00000001321	RRP7A	94	50.000	Fukomys_damarensis
ENSSDUG00000016921	rrp7a	100	82.624	ENSFHEG00000006098	rrp7a	97	82.624	Fundulus_heteroclitus
ENSSDUG00000016921	rrp7a	95	69.888	ENSGMOG00000006218	rrp7a	100	69.888	Gadus_morhua
ENSSDUG00000016921	rrp7a	97	50.360	ENSGALG00000011866	RRP7A	99	50.719	Gallus_gallus
ENSSDUG00000016921	rrp7a	100	78.723	ENSGAFG00000017459	rrp7a	100	78.723	Gambusia_affinis
ENSSDUG00000016921	rrp7a	95	77.695	ENSGACG00000007212	rrp7a	100	77.695	Gasterosteus_aculeatus
ENSSDUG00000016921	rrp7a	100	48.410	ENSGAGG00000014621	RRP7A	100	49.117	Gopherus_agassizii
ENSSDUG00000016921	rrp7a	94	49.248	ENSGGOG00000014957	RRP7A	100	47.368	Gorilla_gorilla
ENSSDUG00000016921	rrp7a	100	85.816	ENSHBUG00000021788	rrp7a	100	85.816	Haplochromis_burtoni
ENSSDUG00000016921	rrp7a	97	48.551	ENSHGLG00000015706	RRP7A	96	48.551	Heterocephalus_glaber_female
ENSSDUG00000016921	rrp7a	94	47.744	ENSHGLG00100008187	-	94	47.744	Heterocephalus_glaber_male
ENSSDUG00000016921	rrp7a	94	47.368	ENSHGLG00100009556	-	93	47.368	Heterocephalus_glaber_male
ENSSDUG00000016921	rrp7a	100	75.532	ENSHCOG00000005813	rrp7a	87	75.532	Hippocampus_comes
ENSSDUG00000016921	rrp7a	100	68.085	ENSIPUG00000000556	rrp7a	100	68.085	Ictalurus_punctatus
ENSSDUG00000016921	rrp7a	94	50.376	ENSSTOG00000003111	RRP7A	93	50.376	Ictidomys_tridecemlineatus
ENSSDUG00000016921	rrp7a	94	47.368	ENSJJAG00000019486	Rrp7a	93	47.744	Jaculus_jaculus
ENSSDUG00000016921	rrp7a	100	78.014	ENSKMAG00000013819	rrp7a	100	78.014	Kryptolebias_marmoratus
ENSSDUG00000016921	rrp7a	94	50.189	ENSLACG00000002670	RRP7A	96	50.566	Latimeria_chalumnae
ENSSDUG00000016921	rrp7a	94	49.248	ENSLAFG00000012447	RRP7A	93	49.624	Loxodonta_africana
ENSSDUG00000016921	rrp7a	94	48.872	ENSMFAG00000042855	RRP7A	100	47.719	Macaca_fascicularis
ENSSDUG00000016921	rrp7a	94	45.489	ENSMFAG00000041664	-	93	45.489	Macaca_fascicularis
ENSSDUG00000016921	rrp7a	94	46.241	ENSMMUG00000010193	-	93	46.617	Macaca_mulatta
ENSSDUG00000016921	rrp7a	94	42.105	ENSMMUG00000009716	RRP7A	100	41.053	Macaca_mulatta
ENSSDUG00000016921	rrp7a	94	49.248	ENSMNEG00000033705	RRP7A	100	48.070	Macaca_nemestrina
ENSSDUG00000016921	rrp7a	99	45.878	ENSMLEG00000040230	RRP7A	99	46.617	Mandrillus_leucophaeus
ENSSDUG00000016921	rrp7a	100	85.106	ENSMAMG00000009125	rrp7a	100	85.106	Mastacembelus_armatus
ENSSDUG00000016921	rrp7a	100	85.461	ENSMZEG00005005197	rrp7a	100	85.461	Maylandia_zebra
ENSSDUG00000016921	rrp7a	92	51.724	ENSMGAG00000011980	RRP7A	100	51.908	Meleagris_gallopavo
ENSSDUG00000016921	rrp7a	94	48.496	ENSMICG00000041800	RRP7A	100	47.018	Microcebus_murinus
ENSSDUG00000016921	rrp7a	100	82.624	ENSMMOG00000004976	rrp7a	100	82.624	Mola_mola
ENSSDUG00000016921	rrp7a	100	49.655	ENSMODG00000006914	RRP7A	99	49.655	Monodelphis_domestica
ENSSDUG00000016921	rrp7a	100	84.397	ENSMALG00000001933	rrp7a	100	84.397	Monopterus_albus
ENSSDUG00000016921	rrp7a	98	48.000	MGP_CAROLIEiJ_G0020092	Rrp7a	96	48.000	Mus_caroli
ENSSDUG00000016921	rrp7a	94	48.496	ENSMUSG00000018040	Rrp7a	84	76.744	Mus_musculus
ENSSDUG00000016921	rrp7a	98	47.273	MGP_PahariEiJ_G0020099	Rrp7a	96	47.273	Mus_pahari
ENSSDUG00000016921	rrp7a	94	48.496	MGP_SPRETEiJ_G0020990	Rrp7a	96	48.000	Mus_spretus
ENSSDUG00000016921	rrp7a	94	50.000	ENSMPUG00000016315	RRP7A	100	48.070	Mustela_putorius_furo
ENSSDUG00000016921	rrp7a	94	49.624	ENSMLUG00000012404	RRP7A	93	50.000	Myotis_lucifugus
ENSSDUG00000016921	rrp7a	94	48.120	ENSNGAG00000010039	Rrp7a	93	48.120	Nannospalax_galili
ENSSDUG00000016921	rrp7a	99	85.765	ENSNBRG00000001824	rrp7a	100	85.765	Neolamprologus_brichardi
ENSSDUG00000016921	rrp7a	94	48.496	ENSNLEG00000036258	RRP7A	100	47.368	Nomascus_leucogenys
ENSSDUG00000016921	rrp7a	100	48.421	ENSODEG00000015126	RRP7A	100	48.772	Octodon_degus
ENSSDUG00000016921	rrp7a	100	85.461	ENSONIG00000008364	rrp7a	99	85.461	Oreochromis_niloticus
ENSSDUG00000016921	rrp7a	83	43.830	ENSOANG00000015007	RRP7A	86	43.096	Ornithorhynchus_anatinus
ENSSDUG00000016921	rrp7a	94	43.774	ENSOCUG00000027434	RRP7A	93	43.774	Oryctolagus_cuniculus
ENSSDUG00000016921	rrp7a	100	79.078	ENSORLG00000014826	rrp7a	100	79.078	Oryzias_latipes
ENSSDUG00000016921	rrp7a	100	78.369	ENSORLG00020006078	rrp7a	100	78.369	Oryzias_latipes_hni
ENSSDUG00000016921	rrp7a	100	78.723	ENSORLG00015018190	rrp7a	100	78.014	Oryzias_latipes_hsok
ENSSDUG00000016921	rrp7a	98	76.895	ENSOMEG00000007090	rrp7a	99	76.895	Oryzias_melastigma
ENSSDUG00000016921	rrp7a	94	47.368	ENSOGAG00000002857	RRP7A	93	48.120	Otolemur_garnettii
ENSSDUG00000016921	rrp7a	94	49.621	ENSOARG00000018986	RRP7A	93	49.621	Ovis_aries
ENSSDUG00000016921	rrp7a	84	47.059	ENSPPAG00000021416	-	83	47.059	Pan_paniscus
ENSSDUG00000016921	rrp7a	79	45.217	ENSPPAG00000029825	-	92	45.652	Pan_paniscus
ENSSDUG00000016921	rrp7a	97	50.000	ENSPPRG00000022185	RRP7A	96	50.362	Panthera_pardus
ENSSDUG00000016921	rrp7a	94	35.926	ENSPTIG00000020965	RRP7A	96	36.201	Panthera_tigris_altaica
ENSSDUG00000016921	rrp7a	94	46.617	ENSPANG00000032001	-	93	46.442	Papio_anubis
ENSSDUG00000016921	rrp7a	94	48.872	ENSPANG00000025354	-	100	47.368	Papio_anubis
ENSSDUG00000016921	rrp7a	100	66.784	ENSPKIG00000007209	rrp7a	86	67.138	Paramormyrops_kingsleyae
ENSSDUG00000016921	rrp7a	92	49.425	ENSPSIG00000007988	RRP7A	96	49.237	Pelodiscus_sinensis
ENSSDUG00000016921	rrp7a	96	61.818	ENSPMGG00000009485	rrp7a	97	61.818	Periophthalmus_magnuspinnatus
ENSSDUG00000016921	rrp7a	99	46.786	ENSPEMG00000022265	Rrp7a	98	46.786	Peromyscus_maniculatus_bairdii
ENSSDUG00000016921	rrp7a	93	44.106	ENSPMAG00000002823	rrp7a	94	44.106	Petromyzon_marinus
ENSSDUG00000016921	rrp7a	99	50.000	ENSPCIG00000026195	RRP7A	97	50.000	Phascolarctos_cinereus
ENSSDUG00000016921	rrp7a	100	80.142	ENSPFOG00000001042	rrp7a	100	80.142	Poecilia_formosa
ENSSDUG00000016921	rrp7a	61	83.721	ENSPLAG00000010787	-	72	83.721	Poecilia_latipinna
ENSSDUG00000016921	rrp7a	61	83.721	ENSPLAG00000009537	rrp7a	72	83.721	Poecilia_latipinna
ENSSDUG00000016921	rrp7a	100	80.851	ENSPMEG00000018204	rrp7a	100	80.851	Poecilia_mexicana
ENSSDUG00000016921	rrp7a	100	79.787	ENSPREG00000016492	rrp7a	100	79.787	Poecilia_reticulata
ENSSDUG00000016921	rrp7a	94	49.624	ENSPPYG00000011897	RRP7A	100	47.719	Pongo_abelii
ENSSDUG00000016921	rrp7a	94	48.120	ENSPCOG00000014018	RRP7A	100	46.667	Propithecus_coquereli
ENSSDUG00000016921	rrp7a	84	44.118	ENSPVAG00000003330	RRP7A	92	44.538	Pteropus_vampyrus
ENSSDUG00000016921	rrp7a	100	85.461	ENSPNYG00000020343	rrp7a	100	85.461	Pundamilia_nyererei
ENSSDUG00000016921	rrp7a	100	68.440	ENSPNAG00000014376	rrp7a	100	68.440	Pygocentrus_nattereri
ENSSDUG00000016921	rrp7a	98	46.909	ENSRNOG00000022896	Rrp7a	96	46.909	Rattus_norvegicus
ENSSDUG00000016921	rrp7a	94	46.840	ENSRBIG00000040358	RRP7A	93	46.269	Rhinopithecus_bieti
ENSSDUG00000016921	rrp7a	94	49.438	ENSRROG00000036754	RRP7A	93	49.813	Rhinopithecus_roxellana
ENSSDUG00000016921	rrp7a	94	48.120	ENSSBOG00000009234	RRP7A	93	48.120	Saimiri_boliviensis_boliviensis
ENSSDUG00000016921	rrp7a	76	52.093	ENSSHAG00000005715	RRP7A	100	53.023	Sarcophilus_harrisii
ENSSDUG00000016921	rrp7a	100	68.794	ENSSFOG00015012621	rrp7a	89	67.376	Scleropages_formosus
ENSSDUG00000016921	rrp7a	100	83.333	ENSSMAG00000004593	rrp7a	100	83.333	Scophthalmus_maximus
ENSSDUG00000016921	rrp7a	100	98.582	ENSSLDG00000024758	rrp7a	100	98.582	Seriola_lalandi_dorsalis
ENSSDUG00000016921	rrp7a	61	71.429	ENSSARG00000002133	-	66	71.429	Sorex_araneus
ENSSDUG00000016921	rrp7a	90	43.701	ENSSPUG00000005373	RRP7A	99	44.922	Sphenodon_punctatus
ENSSDUG00000016921	rrp7a	100	81.206	ENSSPAG00000016048	rrp7a	100	81.206	Stegastes_partitus
ENSSDUG00000016921	rrp7a	94	48.872	ENSSSCG00000033983	RRP7A	100	47.368	Sus_scrofa
ENSSDUG00000016921	rrp7a	92	50.575	ENSTGUG00000009647	RRP7A	100	50.958	Taeniopygia_guttata
ENSSDUG00000016921	rrp7a	100	81.560	ENSTRUG00000024726	rrp7a	100	81.560	Takifugu_rubripes
ENSSDUG00000016921	rrp7a	100	80.142	ENSTNIG00000010842	rrp7a	99	80.142	Tetraodon_nigroviridis
ENSSDUG00000016921	rrp7a	94	51.880	ENSUAMG00000026180	RRP7A	96	51.282	Ursus_americanus
ENSSDUG00000016921	rrp7a	97	48.718	ENSUMAG00000020394	RRP7A	95	47.985	Ursus_maritimus
ENSSDUG00000016921	rrp7a	93	50.958	ENSVVUG00000002248	-	65	50.958	Vulpes_vulpes
ENSSDUG00000016921	rrp7a	100	45.936	ENSXETG00000013414	rrp7a	100	45.936	Xenopus_tropicalis
ENSSDUG00000016921	rrp7a	100	78.799	ENSXCOG00000015955	rrp7a	100	78.799	Xiphophorus_couchianus
ENSSDUG00000016921	rrp7a	100	79.078	ENSXMAG00000006165	rrp7a	100	79.078	Xiphophorus_maculatus