EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000016928 (Gene tree)
Gene ID: 111222953
Gene Symbol: trub2
Alias: fc51e05|wu:fc51e05|zgc:91836
Full Name: TruB pseudouridine synthase family member 2
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 4252 bases
Position: chrBDQW01000109.1:842733-846984
Accession: 111222953
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000023302	TruB_N	PF01509.18	1.2e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000023735	-	2621	XM_022746891	ENSSDUP00000023302	335 (aa)	XP_022602612	UPI000BBEB965

Gene Model

Click here to download ENSSDUG00000016928's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000016928's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000016928	trub2	61	30.583	ENSSDUG00000016414	trub1	70	31.313

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000016928	trub2	84	55.000	ENSG00000167112	TRUB2	84	55.000	Homo_sapiens
ENSSDUG00000016928	trub2	78	85.714	ENSAPOG00000018284	-	94	85.714	Acanthochromis_polyacanthus
ENSSDUG00000016928	trub2	74	77.328	ENSAPOG00000015733	trub2	89	77.328	Acanthochromis_polyacanthus
ENSSDUG00000016928	trub2	55	67.179	ENSAPOG00000018216	-	94	67.179	Acanthochromis_polyacanthus
ENSSDUG00000016928	trub2	84	56.028	ENSAMEG00000015395	TRUB2	85	56.028	Ailuropoda_melanoleuca
ENSSDUG00000016928	trub2	98	80.428	ENSACIG00000016500	trub2	99	80.428	Amphilophus_citrinellus
ENSSDUG00000016928	trub2	100	80.299	ENSAOCG00000002330	trub2	98	80.299	Amphiprion_ocellaris
ENSSDUG00000016928	trub2	100	80.299	ENSAPEG00000013177	trub2	98	80.299	Amphiprion_percula
ENSSDUG00000016928	trub2	96	75.617	ENSATEG00000011371	trub2	91	82.007	Anabas_testudineus
ENSSDUG00000016928	trub2	85	49.296	ENSAPLG00000009254	TRUB2	89	50.909	Anas_platyrhynchos
ENSSDUG00000016928	trub2	88	52.349	ENSACAG00000007331	TRUB2	85	54.064	Anolis_carolinensis
ENSSDUG00000016928	trub2	90	53.420	ENSANAG00000036234	TRUB2	90	56.071	Aotus_nancymaae
ENSSDUG00000016928	trub2	98	77.370	ENSACLG00000010793	trub2	99	77.370	Astatotilapia_calliptera
ENSSDUG00000016928	trub2	97	57.055	ENSAMXG00000031679	trub2	92	57.055	Astyanax_mexicanus
ENSSDUG00000016928	trub2	84	55.357	ENSCJAG00000020009	TRUB2	84	55.357	Callithrix_jacchus
ENSSDUG00000016928	trub2	83	55.556	ENSCAFG00000020068	TRUB2	84	55.556	Canis_familiaris
ENSSDUG00000016928	trub2	51	54.913	ENSCAFG00020017325	-	96	54.913	Canis_lupus_dingo
ENSSDUG00000016928	trub2	83	54.480	ENSCHIG00000021160	TRUB2	84	54.480	Capra_hircus
ENSSDUG00000016928	trub2	83	55.755	ENSTSYG00000034163	TRUB2	84	55.755	Carlito_syrichta
ENSSDUG00000016928	trub2	74	55.242	ENSCAPG00000000223	TRUB2	90	50.704	Cavia_aperea
ENSSDUG00000016928	trub2	83	55.755	ENSCPOG00000013535	TRUB2	88	52.326	Cavia_porcellus
ENSSDUG00000016928	trub2	84	52.313	ENSCCAG00000028463	-	85	52.313	Cebus_capucinus
ENSSDUG00000016928	trub2	84	55.357	ENSCCAG00000026531	-	85	55.357	Cebus_capucinus
ENSSDUG00000016928	trub2	84	55.357	ENSCATG00000038234	TRUB2	84	55.357	Cercocebus_atys
ENSSDUG00000016928	trub2	83	55.036	ENSCLAG00000001702	TRUB2	88	52.907	Chinchilla_lanigera
ENSSDUG00000016928	trub2	84	52.465	ENSCSAG00000014117	TRUB2	84	52.465	Chlorocebus_sabaeus
ENSSDUG00000016928	trub2	83	53.214	ENSCHOG00000001555	TRUB2	84	53.214	Choloepus_hoffmanni
ENSSDUG00000016928	trub2	85	55.245	ENSCPBG00000025186	TRUB2	81	56.272	Chrysemys_picta_bellii
ENSSDUG00000016928	trub2	86	34.014	ENSCSAVG00000003930	-	90	33.673	Ciona_savignyi
ENSSDUG00000016928	trub2	90	45.603	ENSCANG00000016135	TRUB2	83	48.214	Colobus_angolensis_palliatus
ENSSDUG00000016928	trub2	83	53.597	ENSCGRG00001024441	Trub2	92	50.000	Cricetulus_griseus_chok1gshd
ENSSDUG00000016928	trub2	83	53.597	ENSCGRG00000005633	Trub2	84	53.597	Cricetulus_griseus_crigri
ENSSDUG00000016928	trub2	99	66.168	ENSCSEG00000001331	trub2	99	66.168	Cynoglossus_semilaevis
ENSSDUG00000016928	trub2	99	71.601	ENSCVAG00000009901	trub2	99	71.601	Cyprinodon_variegatus
ENSSDUG00000016928	trub2	98	58.104	ENSDARG00000028379	trub2	82	63.103	Danio_rerio
ENSSDUG00000016928	trub2	73	39.344	ENSDNOG00000043967	-	74	39.344	Dasypus_novemcinctus
ENSSDUG00000016928	trub2	83	53.237	ENSDNOG00000045679	-	83	53.237	Dasypus_novemcinctus
ENSSDUG00000016928	trub2	83	55.755	ENSDORG00000016222	Trub2	87	55.755	Dipodomys_ordii
ENSSDUG00000016928	trub2	86	33.677	FBgn0033060	CG7849	91	33.677	Drosophila_melanogaster
ENSSDUG00000016928	trub2	83	53.597	ENSETEG00000009114	TRUB2	86	53.597	Echinops_telfairi
ENSSDUG00000016928	trub2	77	42.105	ENSEBUG00000015723	trub2	81	45.312	Eptatretus_burgeri
ENSSDUG00000016928	trub2	90	52.318	ENSEASG00005016819	TRUB2	84	54.676	Equus_asinus_asinus
ENSSDUG00000016928	trub2	90	52.649	ENSECAG00000023520	TRUB2	84	55.036	Equus_caballus
ENSSDUG00000016928	trub2	83	53.597	ENSEEUG00000008908	TRUB2	84	53.597	Erinaceus_europaeus
ENSSDUG00000016928	trub2	91	64.780	ENSELUG00000002376	trub2	95	66.337	Esox_lucius
ENSSDUG00000016928	trub2	83	56.115	ENSFCAG00000005839	TRUB2	86	56.115	Felis_catus
ENSSDUG00000016928	trub2	75	54.000	ENSFALG00000001364	TRUB2	80	54.941	Ficedula_albicollis
ENSSDUG00000016928	trub2	83	55.000	ENSFDAG00000021374	TRUB2	88	52.299	Fukomys_damarensis
ENSSDUG00000016928	trub2	97	66.154	ENSFHEG00000014655	trub2	97	66.154	Fundulus_heteroclitus
ENSSDUG00000016928	trub2	89	62.752	ENSGMOG00000000981	trub2	97	63.918	Gadus_morhua
ENSSDUG00000016928	trub2	82	53.650	ENSGALG00000004920	TRUB2	67	53.455	Gallus_gallus
ENSSDUG00000016928	trub2	97	70.859	ENSGAFG00000010107	trub2	87	75.517	Gambusia_affinis
ENSSDUG00000016928	trub2	96	79.876	ENSGACG00000001476	trub2	97	79.876	Gasterosteus_aculeatus
ENSSDUG00000016928	trub2	85	54.737	ENSGAGG00000022872	TRUB2	82	55.396	Gopherus_agassizii
ENSSDUG00000016928	trub2	84	54.643	ENSGGOG00000014780	TRUB2	84	54.643	Gorilla_gorilla
ENSSDUG00000016928	trub2	98	77.982	ENSHBUG00000022384	trub2	99	77.982	Haplochromis_burtoni
ENSSDUG00000016928	trub2	83	53.597	ENSHGLG00000016715	TRUB2	84	53.597	Heterocephalus_glaber_female
ENSSDUG00000016928	trub2	83	53.597	ENSHGLG00100016548	TRUB2	84	53.597	Heterocephalus_glaber_male
ENSSDUG00000016928	trub2	91	77.632	ENSHCOG00000017748	trub2	89	79.725	Hippocampus_comes
ENSSDUG00000016928	trub2	92	60.065	ENSIPUG00000017725	hdhd3	51	62.759	Ictalurus_punctatus
ENSSDUG00000016928	trub2	83	55.556	ENSSTOG00000008024	-	88	52.601	Ictidomys_tridecemlineatus
ENSSDUG00000016928	trub2	96	51.084	ENSSTOG00000022617	-	97	50.926	Ictidomys_tridecemlineatus
ENSSDUG00000016928	trub2	83	47.842	ENSJJAG00000019181	Trub2	82	47.842	Jaculus_jaculus
ENSSDUG00000016928	trub2	100	71.045	ENSKMAG00000007861	trub2	100	71.045	Kryptolebias_marmoratus
ENSSDUG00000016928	trub2	95	77.044	ENSLBEG00000000907	trub2	94	77.044	Labrus_bergylta
ENSSDUG00000016928	trub2	84	53.214	ENSLACG00000001515	TRUB2	83	53.214	Latimeria_chalumnae
ENSSDUG00000016928	trub2	88	60.135	ENSLOCG00000000885	trub2	95	61.379	Lepisosteus_oculatus
ENSSDUG00000016928	trub2	83	53.957	ENSLAFG00000002174	TRUB2	91	53.957	Loxodonta_africana
ENSSDUG00000016928	trub2	84	55.000	ENSMFAG00000000881	TRUB2	84	55.000	Macaca_fascicularis
ENSSDUG00000016928	trub2	84	55.000	ENSMMUG00000014146	TRUB2	84	55.000	Macaca_mulatta
ENSSDUG00000016928	trub2	84	55.000	ENSMNEG00000011189	TRUB2	84	55.000	Macaca_nemestrina
ENSSDUG00000016928	trub2	84	55.000	ENSMLEG00000037270	TRUB2	84	55.000	Mandrillus_leucophaeus
ENSSDUG00000016928	trub2	88	82.770	ENSMAMG00000023643	trub2	96	83.162	Mastacembelus_armatus
ENSSDUG00000016928	trub2	98	77.676	ENSMZEG00005016018	trub2	99	77.676	Maylandia_zebra
ENSSDUG00000016928	trub2	55	57.377	ENSMGAG00000003894	TRUB2	92	57.377	Meleagris_gallopavo
ENSSDUG00000016928	trub2	83	53.957	ENSMAUG00000010403	Trub2	95	49.733	Mesocricetus_auratus
ENSSDUG00000016928	trub2	83	55.396	ENSMICG00000047032	TRUB2	84	55.396	Microcebus_murinus
ENSSDUG00000016928	trub2	83	53.237	ENSMOCG00000014291	Trub2	91	53.237	Microtus_ochrogaster
ENSSDUG00000016928	trub2	97	75.692	ENSMMOG00000021674	trub2	100	75.692	Mola_mola
ENSSDUG00000016928	trub2	84	53.737	ENSMODG00000005940	TRUB2	95	53.737	Monodelphis_domestica
ENSSDUG00000016928	trub2	99	79.641	ENSMALG00000021231	trub2	99	79.641	Monopterus_albus
ENSSDUG00000016928	trub2	84	52.500	MGP_CAROLIEiJ_G0023368	Trub2	96	47.619	Mus_caroli
ENSSDUG00000016928	trub2	83	52.518	ENSMUSG00000039826	Trub2	95	47.594	Mus_musculus
ENSSDUG00000016928	trub2	83	53.763	MGP_PahariEiJ_G0024826	Trub2	88	50.867	Mus_pahari
ENSSDUG00000016928	trub2	83	52.878	MGP_SPRETEiJ_G0024286	Trub2	95	48.128	Mus_spretus
ENSSDUG00000016928	trub2	84	54.255	ENSMPUG00000013206	TRUB2	77	54.255	Mustela_putorius_furo
ENSSDUG00000016928	trub2	83	55.036	ENSMLUG00000005256	TRUB2	83	55.036	Myotis_lucifugus
ENSSDUG00000016928	trub2	83	52.158	ENSNGAG00000018679	Trub2	84	52.158	Nannospalax_galili
ENSSDUG00000016928	trub2	98	77.676	ENSNBRG00000016294	trub2	99	77.676	Neolamprologus_brichardi
ENSSDUG00000016928	trub2	84	55.000	ENSNLEG00000017556	TRUB2	84	55.000	Nomascus_leucogenys
ENSSDUG00000016928	trub2	83	55.396	ENSMEUG00000000484	TRUB2	89	55.396	Notamacropus_eugenii
ENSSDUG00000016928	trub2	90	49.175	ENSOPRG00000001981	TRUB2	84	51.439	Ochotona_princeps
ENSSDUG00000016928	trub2	90	52.649	ENSODEG00000017292	TRUB2	85	55.036	Octodon_degus
ENSSDUG00000016928	trub2	98	76.900	ENSONIG00000004230	trub2	99	76.900	Oreochromis_niloticus
ENSSDUG00000016928	trub2	56	53.439	ENSOANG00000029023	-	83	53.439	Ornithorhynchus_anatinus
ENSSDUG00000016928	trub2	83	53.237	ENSOCUG00000026296	TRUB2	76	53.237	Oryctolagus_cuniculus
ENSSDUG00000016928	trub2	95	68.139	ENSORLG00000020011	trub2	85	74.468	Oryzias_latipes
ENSSDUG00000016928	trub2	91	70.820	ENSORLG00020011028	trub2	84	74.048	Oryzias_latipes_hni
ENSSDUG00000016928	trub2	97	67.385	ENSORLG00015007494	trub2	88	73.448	Oryzias_latipes_hsok
ENSSDUG00000016928	trub2	97	71.166	ENSOMEG00000006702	trub2	99	71.166	Oryzias_melastigma
ENSSDUG00000016928	trub2	83	53.957	ENSOARG00000010579	-	84	53.957	Ovis_aries
ENSSDUG00000016928	trub2	60	55.500	ENSOARG00000003785	-	81	55.610	Ovis_aries
ENSSDUG00000016928	trub2	84	55.357	ENSPPAG00000043146	TRUB2	84	55.357	Pan_paniscus
ENSSDUG00000016928	trub2	83	56.115	ENSPPRG00000006307	TRUB2	86	56.115	Panthera_pardus
ENSSDUG00000016928	trub2	83	56.475	ENSPTIG00000012366	TRUB2	86	56.475	Panthera_tigris_altaica
ENSSDUG00000016928	trub2	84	55.000	ENSPTRG00000052151	-	84	55.000	Pan_troglodytes
ENSSDUG00000016928	trub2	84	55.000	ENSPTRG00000021423	TRUB2	84	55.000	Pan_troglodytes
ENSSDUG00000016928	trub2	84	55.000	ENSPANG00000025856	TRUB2	84	55.000	Papio_anubis
ENSSDUG00000016928	trub2	90	66.667	ENSPKIG00000019769	trub2	95	68.041	Paramormyrops_kingsleyae
ENSSDUG00000016928	trub2	83	53.069	ENSPSIG00000015701	TRUB2	92	53.069	Pelodiscus_sinensis
ENSSDUG00000016928	trub2	91	71.987	ENSPMGG00000010206	trub2	91	75.087	Periophthalmus_magnuspinnatus
ENSSDUG00000016928	trub2	83	53.405	ENSPEMG00000017893	Trub2	92	49.711	Peromyscus_maniculatus_bairdii
ENSSDUG00000016928	trub2	87	55.442	ENSPCIG00000026731	TRUB2	89	56.989	Phascolarctos_cinereus
ENSSDUG00000016928	trub2	94	71.384	ENSPFOG00000018018	trub2	74	77.143	Poecilia_formosa
ENSSDUG00000016928	trub2	94	71.069	ENSPLAG00000010484	trub2	80	76.786	Poecilia_latipinna
ENSSDUG00000016928	trub2	97	71.865	ENSPMEG00000012913	trub2	97	71.254	Poecilia_mexicana
ENSSDUG00000016928	trub2	97	71.560	ENSPREG00000002549	trub2	97	71.560	Poecilia_reticulata
ENSSDUG00000016928	trub2	84	54.643	ENSPPYG00000019650	TRUB2	86	54.643	Pongo_abelii
ENSSDUG00000016928	trub2	83	54.676	ENSPCAG00000015068	TRUB2	85	54.676	Procavia_capensis
ENSSDUG00000016928	trub2	83	55.396	ENSPCOG00000017100	TRUB2	84	55.396	Propithecus_coquereli
ENSSDUG00000016928	trub2	78	54.231	ENSPVAG00000001224	TRUB2	87	54.231	Pteropus_vampyrus
ENSSDUG00000016928	trub2	98	77.982	ENSPNYG00000013666	trub2	99	77.982	Pundamilia_nyererei
ENSSDUG00000016928	trub2	98	55.522	ENSPNAG00000017292	trub2	82	60.976	Pygocentrus_nattereri
ENSSDUG00000016928	trub2	83	53.405	ENSRNOG00000043189	Trub2	86	53.405	Rattus_norvegicus
ENSSDUG00000016928	trub2	84	49.286	ENSRBIG00000006965	TRUB2	83	49.286	Rhinopithecus_bieti
ENSSDUG00000016928	trub2	84	55.357	ENSRROG00000042928	TRUB2	84	55.357	Rhinopithecus_roxellana
ENSSDUG00000016928	trub2	83	55.396	ENSSBOG00000022439	TRUB2	84	55.396	Saimiri_boliviensis_boliviensis
ENSSDUG00000016928	trub2	86	64.706	ENSSFOG00015013391	trub2	92	64.706	Scleropages_formosus
ENSSDUG00000016928	trub2	97	78.154	ENSSMAG00000020820	trub2	88	84.536	Scophthalmus_maximus
ENSSDUG00000016928	trub2	100	95.522	ENSSLDG00000024701	trub2	100	95.522	Seriola_lalandi_dorsalis
ENSSDUG00000016928	trub2	85	51.579	ENSSPUG00000015515	TRUB2	85	51.579	Sphenodon_punctatus
ENSSDUG00000016928	trub2	100	75.371	ENSSPAG00000017865	trub2	100	74.925	Stegastes_partitus
ENSSDUG00000016928	trub2	90	51.974	ENSSSCG00000005645	TRUB2	84	54.618	Sus_scrofa
ENSSDUG00000016928	trub2	74	55.378	ENSTGUG00000003704	TRUB2	94	55.378	Taeniopygia_guttata
ENSSDUG00000016928	trub2	89	73.826	ENSTRUG00000015499	trub2	89	74.227	Takifugu_rubripes
ENSSDUG00000016928	trub2	87	75.685	ENSTNIG00000014721	trub2	99	75.945	Tetraodon_nigroviridis
ENSSDUG00000016928	trub2	53	55.056	ENSTBEG00000000586	TRUB2	79	55.056	Tupaia_belangeri
ENSSDUG00000016928	trub2	92	49.191	ENSTTRG00000016486	TRUB2	84	52.158	Tursiops_truncatus
ENSSDUG00000016928	trub2	84	54.965	ENSUAMG00000020276	TRUB2	83	54.965	Ursus_americanus
ENSSDUG00000016928	trub2	84	54.965	ENSUMAG00000022051	TRUB2	83	54.965	Ursus_maritimus
ENSSDUG00000016928	trub2	90	40.728	ENSVPAG00000005793	TRUB2	87	42.086	Vicugna_pacos
ENSSDUG00000016928	trub2	83	55.556	ENSVVUG00000013451	TRUB2	79	55.556	Vulpes_vulpes
ENSSDUG00000016928	trub2	84	53.169	ENSXETG00000003973	trub2	86	53.169	Xenopus_tropicalis
ENSSDUG00000016928	trub2	97	72.615	ENSXCOG00000008759	trub2	97	72.615	Xiphophorus_couchianus
ENSSDUG00000016928	trub2	97	72.308	ENSXMAG00000015478	trub2	97	72.308	Xiphophorus_maculatus