EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000016949 (Gene tree)
Gene ID: 111226902
Gene Symbol: -
Alias: -
Full Name: small nuclear RNA activating complex polypeptide 2
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 6817 bases
Position: chrBDQW01000167.1:62871-69687
Accession: 111226902
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000023317	SnAPC_2_like	PF11035.8	1.6e-70	1	2
ENSSDUP00000023317	SnAPC_2_like	PF11035.8	1.6e-70	2	2
ENSSDUP00000023341	SnAPC_2_like	PF11035.8	8.9e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000023750	-	2360	XM_022752211	ENSSDUP00000023317	549 (aa)	XP_022607932	-
ENSSDUT00000023776	-	1035	-	ENSSDUP00000023341	344 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000016949's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000016949's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000016949	-	91	30.631	ENSG00000104976	SNAPC2	94	37.895	Homo_sapiens
ENSSDUG00000016949	-	100	41.944	ENSAPOG00000000954	-	95	80.000	Acanthochromis_polyacanthus
ENSSDUG00000016949	-	99	30.919	ENSAMEG00000008622	SNAPC2	98	30.252	Ailuropoda_melanoleuca
ENSSDUG00000016949	-	100	40.688	ENSACIG00000019919	-	98	49.640	Amphilophus_citrinellus
ENSSDUG00000016949	-	64	47.207	ENSAOCG00000012420	-	99	45.634	Amphiprion_ocellaris
ENSSDUG00000016949	-	100	39.193	ENSAOCG00000013265	-	99	49.894	Amphiprion_ocellaris
ENSSDUG00000016949	-	100	55.385	ENSAPEG00000010950	-	94	76.000	Amphiprion_percula
ENSSDUG00000016949	-	100	54.595	ENSATEG00000003573	-	100	54.234	Anabas_testudineus
ENSSDUG00000016949	-	56	36.646	ENSACAG00000026540	-	85	32.164	Anolis_carolinensis
ENSSDUG00000016949	-	99	31.844	ENSANAG00000029939	SNAPC2	98	31.461	Aotus_nancymaae
ENSSDUG00000016949	-	100	46.377	ENSACLG00000013092	-	99	45.833	Astatotilapia_calliptera
ENSSDUG00000016949	-	69	35.385	ENSAMXG00000038205	snapc2	58	40.964	Astyanax_mexicanus
ENSSDUG00000016949	-	99	31.768	ENSBTAG00000014926	SNAPC2	99	30.663	Bos_taurus
ENSSDUG00000016949	-	91	32.198	ENSCJAG00000006117	SNAPC2	98	32.011	Callithrix_jacchus
ENSSDUG00000016949	-	99	31.667	ENSCAFG00000031676	SNAPC2	90	31.333	Canis_familiaris
ENSSDUG00000016949	-	99	31.667	ENSCAFG00020022851	SNAPC2	90	31.333	Canis_lupus_dingo
ENSSDUG00000016949	-	78	31.802	ENSTSYG00000037088	SNAPC2	87	41.379	Carlito_syrichta
ENSSDUG00000016949	-	91	30.793	ENSCCAG00000034172	SNAPC2	98	31.006	Cebus_capucinus
ENSSDUG00000016949	-	91	32.326	ENSCATG00000037131	SNAPC2	98	32.123	Cercocebus_atys
ENSSDUG00000016949	-	56	34.969	ENSCLAG00000006885	SNAPC2	73	33.333	Chinchilla_lanigera
ENSSDUG00000016949	-	91	31.915	ENSCSAG00000008167	SNAPC2	98	31.768	Chlorocebus_sabaeus
ENSSDUG00000016949	-	78	31.930	ENSCPBG00000002277	SNAPC2	54	50.000	Chrysemys_picta_bellii
ENSSDUG00000016949	-	91	31.307	ENSCANG00000040525	SNAPC2	98	31.476	Colobus_angolensis_palliatus
ENSSDUG00000016949	-	99	30.504	ENSCGRG00001006223	Snapc2	75	34.395	Cricetulus_griseus_chok1gshd
ENSSDUG00000016949	-	80	31.699	ENSCGRG00000005622	Snapc2	96	30.744	Cricetulus_griseus_crigri
ENSSDUG00000016949	-	70	41.221	ENSCSEG00000014882	-	52	41.221	Cynoglossus_semilaevis
ENSSDUG00000016949	-	78	36.533	ENSCVAG00000011360	-	99	55.056	Cyprinodon_variegatus
ENSSDUG00000016949	-	76	34.532	ENSDARG00000036473	snapc2	68	36.095	Danio_rerio
ENSSDUG00000016949	-	99	30.595	ENSDNOG00000036458	SNAPC2	81	34.395	Dasypus_novemcinctus
ENSSDUG00000016949	-	90	31.595	ENSDORG00000009155	Snapc2	88	31.529	Dipodomys_ordii
ENSSDUG00000016949	-	99	30.286	ENSETEG00000012986	SNAPC2	85	32.484	Echinops_telfairi
ENSSDUG00000016949	-	99	32.353	ENSEASG00005003809	SNAPC2	98	32.000	Equus_asinus_asinus
ENSSDUG00000016949	-	99	32.597	ENSECAG00000011011	SNAPC2	98	31.856	Equus_caballus
ENSSDUG00000016949	-	67	40.000	ENSELUG00000010380	-	91	40.000	Esox_lucius
ENSSDUG00000016949	-	99	30.295	ENSFCAG00000014945	SNAPC2	81	35.220	Felis_catus
ENSSDUG00000016949	-	69	32.422	ENSFDAG00000001564	SNAPC2	84	33.730	Fukomys_damarensis
ENSSDUG00000016949	-	82	31.633	ENSGAGG00000015845	SNAPC2	54	49.231	Gopherus_agassizii
ENSSDUG00000016949	-	91	30.030	ENSGGOG00000022392	SNAPC2	98	30.028	Gorilla_gorilla
ENSSDUG00000016949	-	66	32.020	ENSHGLG00000011707	SNAPC2	80	36.306	Heterocephalus_glaber_female
ENSSDUG00000016949	-	66	31.034	ENSHGLG00100003422	SNAPC2	63	36.306	Heterocephalus_glaber_male
ENSSDUG00000016949	-	100	37.875	ENSHCOG00000002795	-	94	44.041	Hippocampus_comes
ENSSDUG00000016949	-	89	36.641	ENSIPUG00000004844	Snapc2	92	38.462	Ictalurus_punctatus
ENSSDUG00000016949	-	99	31.476	ENSSTOG00000009102	SNAPC2	98	30.532	Ictidomys_tridecemlineatus
ENSSDUG00000016949	-	56	32.237	ENSJJAG00000003060	Snapc2	81	30.667	Jaculus_jaculus
ENSSDUG00000016949	-	94	47.368	ENSKMAG00000007231	-	96	47.739	Kryptolebias_marmoratus
ENSSDUG00000016949	-	83	36.735	ENSLBEG00000009986	-	90	36.333	Labrus_bergylta
ENSSDUG00000016949	-	99	31.831	ENSLOCG00000014065	snapc2	98	32.964	Lepisosteus_oculatus
ENSSDUG00000016949	-	78	30.640	ENSLAFG00000023323	SNAPC2	79	31.834	Loxodonta_africana
ENSSDUG00000016949	-	91	31.611	ENSMFAG00000034273	SNAPC2	98	31.215	Macaca_fascicularis
ENSSDUG00000016949	-	91	31.915	ENSMMUG00000006540	SNAPC2	98	32.069	Macaca_mulatta
ENSSDUG00000016949	-	91	31.385	ENSMNEG00000039547	SNAPC2	98	31.549	Macaca_nemestrina
ENSSDUG00000016949	-	91	32.326	ENSMLEG00000031059	SNAPC2	98	32.123	Mandrillus_leucophaeus
ENSSDUG00000016949	-	97	53.947	ENSMAMG00000018195	-	100	53.947	Mastacembelus_armatus
ENSSDUG00000016949	-	100	46.377	ENSMZEG00005009488	-	99	49.053	Maylandia_zebra
ENSSDUG00000016949	-	99	31.300	ENSMICG00000035695	SNAPC2	98	30.667	Microcebus_murinus
ENSSDUG00000016949	-	84	44.372	ENSMMOG00000020608	-	75	70.787	Mola_mola
ENSSDUG00000016949	-	100	42.033	ENSMALG00000002335	-	97	57.576	Monopterus_albus
ENSSDUG00000016949	-	55	31.210	MGP_CAROLIEiJ_G0030795	Snapc2	74	33.121	Mus_caroli
ENSSDUG00000016949	-	55	31.847	ENSMUSG00000011837	Snapc2	74	31.847	Mus_musculus
ENSSDUG00000016949	-	55	32.484	MGP_SPRETEiJ_G0031903	Snapc2	74	31.847	Mus_spretus
ENSSDUG00000016949	-	56	33.125	ENSMPUG00000008010	SNAPC2	81	32.919	Mustela_putorius_furo
ENSSDUG00000016949	-	58	32.057	ENSMLUG00000001710	-	58	32.057	Myotis_lucifugus
ENSSDUG00000016949	-	63	30.357	ENSMLUG00000013735	-	61	50.000	Myotis_lucifugus
ENSSDUG00000016949	-	69	30.894	ENSMLUG00000002738	-	66	50.000	Myotis_lucifugus
ENSSDUG00000016949	-	90	32.817	ENSMLUG00000013689	-	98	31.161	Myotis_lucifugus
ENSSDUG00000016949	-	83	30.063	ENSNGAG00000014201	Snapc2	75	33.537	Nannospalax_galili
ENSSDUG00000016949	-	100	40.169	ENSNBRG00000003764	-	98	40.845	Neolamprologus_brichardi
ENSSDUG00000016949	-	91	30.178	ENSNLEG00000001250	SNAPC2	98	30.854	Nomascus_leucogenys
ENSSDUG00000016949	-	56	36.076	ENSMEUG00000014367	SNAPC2	62	46.875	Notamacropus_eugenii
ENSSDUG00000016949	-	99	30.890	ENSODEG00000011415	SNAPC2	98	30.263	Octodon_degus
ENSSDUG00000016949	-	78	43.796	ENSONIG00000002078	-	100	70.000	Oreochromis_niloticus
ENSSDUG00000016949	-	62	35.025	ENSOCUG00000027536	SNAPC2	59	34.500	Oryctolagus_cuniculus
ENSSDUG00000016949	-	100	35.952	ENSORLG00000010375	-	77	45.833	Oryzias_latipes
ENSSDUG00000016949	-	100	35.407	ENSORLG00020015071	-	90	45.833	Oryzias_latipes_hni
ENSSDUG00000016949	-	71	40.708	ENSORLG00015016075	-	82	42.365	Oryzias_latipes_hsok
ENSSDUG00000016949	-	72	46.256	ENSOMEG00000003040	snapc2	84	46.256	Oryzias_melastigma
ENSSDUG00000016949	-	99	31.143	ENSOGAG00000012870	SNAPC2	86	35.802	Otolemur_garnettii
ENSSDUG00000016949	-	78	30.952	ENSOARG00000003045	SNAPC2	97	30.612	Ovis_aries
ENSSDUG00000016949	-	53	36.478	ENSPPAG00000032460	SNAPC2	83	34.783	Pan_paniscus
ENSSDUG00000016949	-	99	30.579	ENSPPRG00000003265	SNAPC2	81	35.849	Panthera_pardus
ENSSDUG00000016949	-	91	30.330	ENSPTRG00000042034	SNAPC2	98	30.303	Pan_troglodytes
ENSSDUG00000016949	-	91	31.915	ENSPANG00000025882	SNAPC2	98	31.768	Papio_anubis
ENSSDUG00000016949	-	78	32.746	ENSPSIG00000016099	SNAPC2	71	37.143	Pelodiscus_sinensis
ENSSDUG00000016949	-	99	31.452	ENSPEMG00000009767	Snapc2	98	30.623	Peromyscus_maniculatus_bairdii
ENSSDUG00000016949	-	100	36.885	ENSPFOG00000012045	-	98	42.211	Poecilia_formosa
ENSSDUG00000016949	-	100	38.032	ENSPLAG00000018873	-	90	48.872	Poecilia_latipinna
ENSSDUG00000016949	-	100	38.564	ENSPMEG00000002270	-	90	50.376	Poecilia_mexicana
ENSSDUG00000016949	-	95	44.255	ENSPREG00000003140	-	99	37.906	Poecilia_reticulata
ENSSDUG00000016949	-	91	30.746	ENSPPYG00000009494	SNAPC2	98	30.959	Pongo_abelii
ENSSDUG00000016949	-	99	31.956	ENSPCOG00000026672	SNAPC2	98	33.148	Propithecus_coquereli
ENSSDUG00000016949	-	69	35.385	ENSPNAG00000020947	snapc2	67	37.569	Pygocentrus_nattereri
ENSSDUG00000016949	-	59	35.032	ENSRNOG00000001056	Snapc2	78	35.669	Rattus_norvegicus
ENSSDUG00000016949	-	91	31.003	ENSRBIG00000044314	SNAPC2	98	31.198	Rhinopithecus_bieti
ENSSDUG00000016949	-	91	31.003	ENSRROG00000043480	SNAPC2	98	31.198	Rhinopithecus_roxellana
ENSSDUG00000016949	-	91	31.098	ENSSBOG00000011587	SNAPC2	98	31.006	Saimiri_boliviensis_boliviensis
ENSSDUG00000016949	-	100	59.231	ENSSMAG00000009095	-	99	60.452	Scophthalmus_maximus
ENSSDUG00000016949	-	60	81.818	ENSSLDG00000006093	-	100	79.697	Seriola_lalandi_dorsalis
ENSSDUG00000016949	-	70	54.645	ENSSPAG00000008637	-	99	50.000	Stegastes_partitus
ENSSDUG00000016949	-	99	30.726	ENSSSCG00000013589	SNAPC2	82	34.395	Sus_scrofa
ENSSDUG00000016949	-	78	35.410	ENSTRUG00000005122	-	97	53.922	Takifugu_rubripes
ENSSDUG00000016949	-	99	30.328	ENSTTRG00000010165	SNAPC2	82	33.121	Tursiops_truncatus
ENSSDUG00000016949	-	99	30.986	ENSUAMG00000021489	SNAPC2	81	33.750	Ursus_americanus
ENSSDUG00000016949	-	99	31.667	ENSVVUG00000026998	SNAPC2	90	31.333	Vulpes_vulpes
ENSSDUG00000016949	-	100	33.477	ENSXMAG00000027683	-	99	39.201	Xiphophorus_maculatus