EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000016954 (Gene tree)
Gene ID: 111219312
Gene Symbol: zgc:158828
Alias: -
Full Name: DEAH-box helicase 35
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 8693 bases
Position: chrBDQW01000057.1:350106-358798
Accession: 111219312
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000023394	DEAD	PF00270.29	1.5e-06	1	1
ENSSDUP00000023369	DEAD	PF00270.29	1.7e-06	1	1
ENSSDUP00000023394	HA2	PF04408.23	7.7e-21	1	1
ENSSDUP00000023369	HA2	PF04408.23	8.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000023804	-	4121	XM_022741946	ENSSDUP00000023369	699 (aa)	XP_022597667	UPI000BBEEE66
ENSSDUT00000023830	-	2028	-	ENSSDUP00000023394	675 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000016954's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000016954's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000016954	zgc:158828	95	46.912	ENSSDUG00000002650	DHX15	86	47.059
ENSSDUG00000016954	zgc:158828	95	49.023	ENSSDUG00000010822	dhx8	54	49.023
ENSSDUG00000016954	zgc:158828	80	35.294	ENSSDUG00000021018	dhx34	50	35.294
ENSSDUG00000016954	zgc:158828	95	46.834	ENSSDUG00000007372	dhx15	86	46.834
ENSSDUG00000016954	zgc:158828	95	48.876	ENSSDUG00000010774	dhx8	56	48.276
ENSSDUG00000016954	zgc:158828	93	49.313	ENSSDUG00000006948	dhx16	61	49.313
ENSSDUG00000016954	zgc:158828	92	36.538	ENSSDUG00000023790	dhx29	52	33.544
ENSSDUG00000016954	zgc:158828	94	44.394	ENSSDUG00000001413	dhx38	52	44.394
ENSSDUG00000016954	zgc:158828	96	33.046	ENSSDUG00000017808	dhx32a	93	33.046
ENSSDUG00000016954	zgc:158828	89	30.243	ENSSDUG00000017407	dhx9	57	30.385
ENSSDUG00000016954	zgc:158828	92	40.119	ENSSDUG00000012511	dhx40	89	40.119
ENSSDUG00000016954	zgc:158828	91	31.963	ENSSDUG00000015874	dhx32b	87	31.963
ENSSDUG00000016954	zgc:158828	96	40.418	ENSSDUG00000002265	dhx37	64	40.418
ENSSDUG00000016954	zgc:158828	92	31.117	ENSSDUG00000020759	dqx1	88	31.117
ENSSDUG00000016954	zgc:158828	89	42.512	ENSSDUG00000009022	dhx57	50	41.327
ENSSDUG00000016954	zgc:158828	98	41.512	ENSSDUG00000017798	dhx33	99	41.512
ENSSDUG00000016954	zgc:158828	86	37.864	ENSSDUG00000023657	dhx36	62	38.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000016954	zgc:158828	99	78.402	ENSG00000101452	DHX35	99	78.402	Homo_sapiens
ENSSDUG00000016954	zgc:158828	100	98.140	ENSAPOG00000016979	zgc:158828	98	98.140	Acanthochromis_polyacanthus
ENSSDUG00000016954	zgc:158828	99	77.571	ENSAMEG00000011925	DHX35	99	77.571	Ailuropoda_melanoleuca
ENSSDUG00000016954	zgc:158828	100	97.778	ENSACIG00000009707	zgc:158828	100	97.778	Amphilophus_citrinellus
ENSSDUG00000016954	zgc:158828	100	98.140	ENSAOCG00000020254	zgc:158828	100	98.140	Amphiprion_ocellaris
ENSSDUG00000016954	zgc:158828	100	98.140	ENSAPEG00000008001	zgc:158828	98	98.140	Amphiprion_percula
ENSSDUG00000016954	zgc:158828	100	97.568	ENSATEG00000005292	zgc:158828	100	97.568	Anabas_testudineus
ENSSDUG00000016954	zgc:158828	99	78.417	ENSAPLG00000008832	DHX35	99	78.417	Anas_platyrhynchos
ENSSDUG00000016954	zgc:158828	99	79.143	ENSACAG00000014298	DHX35	87	79.143	Anolis_carolinensis
ENSSDUG00000016954	zgc:158828	99	75.262	ENSANAG00000037687	DHX35	99	75.253	Aotus_nancymaae
ENSSDUG00000016954	zgc:158828	100	97.333	ENSACLG00000026087	zgc:158828	100	97.333	Astatotilapia_calliptera
ENSSDUG00000016954	zgc:158828	98	87.481	ENSAMXG00000020520	zgc:158828	99	87.481	Astyanax_mexicanus
ENSSDUG00000016954	zgc:158828	99	77.713	ENSBTAG00000004039	DHX35	99	77.429	Bos_taurus
ENSSDUG00000016954	zgc:158828	97	53.690	WBGene00022056	ddx-35	93	53.690	Caenorhabditis_elegans
ENSSDUG00000016954	zgc:158828	99	77.714	ENSCJAG00000011495	DHX35	99	77.714	Callithrix_jacchus
ENSSDUG00000016954	zgc:158828	99	75.571	ENSCAFG00000009044	DHX35	99	76.156	Canis_familiaris
ENSSDUG00000016954	zgc:158828	78	79.083	ENSCAFG00020012796	-	99	79.083	Canis_lupus_dingo
ENSSDUG00000016954	zgc:158828	99	77.286	ENSCHIG00000023863	DHX35	99	77.286	Capra_hircus
ENSSDUG00000016954	zgc:158828	98	78.313	ENSTSYG00000007049	DHX35	99	78.313	Carlito_syrichta
ENSSDUG00000016954	zgc:158828	99	78.107	ENSCPOG00000012411	DHX35	99	78.107	Cavia_porcellus
ENSSDUG00000016954	zgc:158828	99	78.107	ENSCCAG00000030551	DHX35	99	79.450	Cebus_capucinus
ENSSDUG00000016954	zgc:158828	99	78.550	ENSCATG00000032920	DHX35	99	78.550	Cercocebus_atys
ENSSDUG00000016954	zgc:158828	99	78.254	ENSCLAG00000006320	DHX35	99	78.254	Chinchilla_lanigera
ENSSDUG00000016954	zgc:158828	99	78.286	ENSCSAG00000013928	DHX35	99	78.286	Chlorocebus_sabaeus
ENSSDUG00000016954	zgc:158828	90	71.575	ENSCHOG00000006813	DHX35	89	71.575	Choloepus_hoffmanni
ENSSDUG00000016954	zgc:158828	78	80.550	ENSCPBG00000018175	-	99	80.550	Chrysemys_picta_bellii
ENSSDUG00000016954	zgc:158828	94	60.514	ENSCING00000006878	-	99	60.514	Ciona_intestinalis
ENSSDUG00000016954	zgc:158828	99	78.107	ENSCANG00000042479	DHX35	99	78.107	Colobus_angolensis_palliatus
ENSSDUG00000016954	zgc:158828	99	78.254	ENSCGRG00001006986	Dhx35	99	78.254	Cricetulus_griseus_chok1gshd
ENSSDUG00000016954	zgc:158828	99	78.254	ENSCGRG00000014712	Dhx35	99	78.254	Cricetulus_griseus_crigri
ENSSDUG00000016954	zgc:158828	99	93.403	ENSCSEG00000021003	zgc:158828	93	93.403	Cynoglossus_semilaevis
ENSSDUG00000016954	zgc:158828	100	94.993	ENSCVAG00000010301	zgc:158828	100	94.993	Cyprinodon_variegatus
ENSSDUG00000016954	zgc:158828	70	89.938	ENSDARG00000063419	DHX35	100	89.938	Danio_rerio
ENSSDUG00000016954	zgc:158828	99	77.143	ENSDNOG00000017447	DHX35	99	77.143	Dasypus_novemcinctus
ENSSDUG00000016954	zgc:158828	99	77.959	ENSDORG00000005573	Dhx35	99	77.959	Dipodomys_ordii
ENSSDUG00000016954	zgc:158828	97	49.265	FBgn0031631	CG3225	98	49.265	Drosophila_melanogaster
ENSSDUG00000016954	zgc:158828	93	69.892	ENSETEG00000010293	DHX35	93	69.892	Echinops_telfairi
ENSSDUG00000016954	zgc:158828	99	67.867	ENSEBUG00000000373	zgc:158828	99	67.867	Eptatretus_burgeri
ENSSDUG00000016954	zgc:158828	98	78.701	ENSEASG00005023467	DHX35	96	78.701	Equus_asinus_asinus
ENSSDUG00000016954	zgc:158828	99	78.714	ENSECAG00000013881	DHX35	99	78.714	Equus_caballus
ENSSDUG00000016954	zgc:158828	84	74.024	ENSEEUG00000006399	DHX35	83	74.024	Erinaceus_europaeus
ENSSDUG00000016954	zgc:158828	100	94.993	ENSELUG00000001988	zgc:158828	100	94.993	Esox_lucius
ENSSDUG00000016954	zgc:158828	99	77.959	ENSFCAG00000025103	DHX35	99	77.959	Felis_catus
ENSSDUG00000016954	zgc:158828	91	76.985	ENSFALG00000005627	-	90	76.985	Ficedula_albicollis
ENSSDUG00000016954	zgc:158828	99	78.550	ENSFDAG00000016726	DHX35	99	78.550	Fukomys_damarensis
ENSSDUG00000016954	zgc:158828	100	95.851	ENSFHEG00000022602	zgc:158828	100	95.851	Fundulus_heteroclitus
ENSSDUG00000016954	zgc:158828	98	93.886	ENSGMOG00000003036	zgc:158828	100	93.886	Gadus_morhua
ENSSDUG00000016954	zgc:158828	99	77.856	ENSGALG00000003658	DHX35	99	77.856	Gallus_gallus
ENSSDUG00000016954	zgc:158828	100	94.963	ENSGAFG00000021118	zgc:158828	100	94.963	Gambusia_affinis
ENSSDUG00000016954	zgc:158828	99	94.842	ENSGACG00000001290	zgc:158828	100	95.046	Gasterosteus_aculeatus
ENSSDUG00000016954	zgc:158828	99	80.000	ENSGAGG00000015721	DHX35	99	80.000	Gopherus_agassizii
ENSSDUG00000016954	zgc:158828	99	78.143	ENSGGOG00000013960	DHX35	99	78.143	Gorilla_gorilla
ENSSDUG00000016954	zgc:158828	100	97.185	ENSHBUG00000005482	zgc:158828	100	97.185	Haplochromis_burtoni
ENSSDUG00000016954	zgc:158828	92	80.187	ENSHGLG00000010264	DHX35	97	80.389	Heterocephalus_glaber_female
ENSSDUG00000016954	zgc:158828	99	78.698	ENSHGLG00100019231	DHX35	99	78.698	Heterocephalus_glaber_male
ENSSDUG00000016954	zgc:158828	100	91.989	ENSHCOG00000011691	zgc:158828	100	91.989	Hippocampus_comes
ENSSDUG00000016954	zgc:158828	100	90.415	ENSIPUG00000016363	dhx35	100	90.415	Ictalurus_punctatus
ENSSDUG00000016954	zgc:158828	99	78.857	ENSSTOG00000002005	DHX35	99	78.857	Ictidomys_tridecemlineatus
ENSSDUG00000016954	zgc:158828	99	74.000	ENSJJAG00000000208	Dhx35	99	74.000	Jaculus_jaculus
ENSSDUG00000016954	zgc:158828	100	95.708	ENSKMAG00000018089	zgc:158828	100	95.708	Kryptolebias_marmoratus
ENSSDUG00000016954	zgc:158828	100	92.407	ENSLBEG00000006365	zgc:158828	100	92.407	Labrus_bergylta
ENSSDUG00000016954	zgc:158828	99	79.545	ENSLACG00000015340	DHX35	99	79.545	Latimeria_chalumnae
ENSSDUG00000016954	zgc:158828	99	89.828	ENSLOCG00000004639	zgc:158828	99	89.828	Lepisosteus_oculatus
ENSSDUG00000016954	zgc:158828	99	77.959	ENSLAFG00000004103	DHX35	99	77.959	Loxodonta_africana
ENSSDUG00000016954	zgc:158828	99	78.402	ENSMFAG00000031593	DHX35	99	78.402	Macaca_fascicularis
ENSSDUG00000016954	zgc:158828	99	78.402	ENSMMUG00000003385	DHX35	99	78.402	Macaca_mulatta
ENSSDUG00000016954	zgc:158828	99	78.402	ENSMNEG00000024351	DHX35	99	78.402	Macaca_nemestrina
ENSSDUG00000016954	zgc:158828	99	78.550	ENSMLEG00000037761	DHX35	99	78.550	Mandrillus_leucophaeus
ENSSDUG00000016954	zgc:158828	100	97.997	ENSMAMG00000010572	zgc:158828	100	97.997	Mastacembelus_armatus
ENSSDUG00000016954	zgc:158828	100	97.333	ENSMZEG00005026563	zgc:158828	100	97.333	Maylandia_zebra
ENSSDUG00000016954	zgc:158828	99	79.060	ENSMGAG00000003174	DHX35	99	79.060	Meleagris_gallopavo
ENSSDUG00000016954	zgc:158828	99	74.571	ENSMAUG00000004742	Dhx35	99	74.571	Mesocricetus_auratus
ENSSDUG00000016954	zgc:158828	99	78.107	ENSMICG00000013282	DHX35	99	78.107	Microcebus_murinus
ENSSDUG00000016954	zgc:158828	99	78.698	ENSMOCG00000007520	Dhx35	99	78.698	Microtus_ochrogaster
ENSSDUG00000016954	zgc:158828	100	89.217	ENSMMOG00000020376	zgc:158828	100	89.217	Mola_mola
ENSSDUG00000016954	zgc:158828	99	79.571	ENSMODG00000000495	DHX35	99	79.571	Monodelphis_domestica
ENSSDUG00000016954	zgc:158828	100	94.815	ENSMALG00000000446	zgc:158828	100	94.815	Monopterus_albus
ENSSDUG00000016954	zgc:158828	99	78.254	MGP_CAROLIEiJ_G0024595	Dhx35	99	78.254	Mus_caroli
ENSSDUG00000016954	zgc:158828	99	78.550	ENSMUSG00000027655	Dhx35	99	78.550	Mus_musculus
ENSSDUG00000016954	zgc:158828	99	78.402	MGP_PahariEiJ_G0026039	Dhx35	99	78.402	Mus_pahari
ENSSDUG00000016954	zgc:158828	99	78.550	MGP_SPRETEiJ_G0025517	Dhx35	99	78.550	Mus_spretus
ENSSDUG00000016954	zgc:158828	99	75.499	ENSMPUG00000017704	DHX35	98	79.739	Mustela_putorius_furo
ENSSDUG00000016954	zgc:158828	99	78.286	ENSMLUG00000009227	DHX35	99	78.286	Myotis_lucifugus
ENSSDUG00000016954	zgc:158828	99	78.402	ENSNGAG00000018900	Dhx35	99	78.402	Nannospalax_galili
ENSSDUG00000016954	zgc:158828	100	97.333	ENSNBRG00000014723	zgc:158828	100	97.333	Neolamprologus_brichardi
ENSSDUG00000016954	zgc:158828	96	78.635	ENSNLEG00000006429	DHX35	97	78.635	Nomascus_leucogenys
ENSSDUG00000016954	zgc:158828	82	68.987	ENSMEUG00000004250	-	79	68.987	Notamacropus_eugenii
ENSSDUG00000016954	zgc:158828	92	75.663	ENSOPRG00000013605	DHX35	91	75.663	Ochotona_princeps
ENSSDUG00000016954	zgc:158828	99	78.550	ENSODEG00000015255	DHX35	99	78.550	Octodon_degus
ENSSDUG00000016954	zgc:158828	100	96.444	ENSONIG00000017426	zgc:158828	100	96.444	Oreochromis_niloticus
ENSSDUG00000016954	zgc:158828	99	80.029	ENSOANG00000015094	DHX35	99	80.029	Ornithorhynchus_anatinus
ENSSDUG00000016954	zgc:158828	99	78.143	ENSOCUG00000009416	DHX35	86	78.143	Oryctolagus_cuniculus
ENSSDUG00000016954	zgc:158828	99	95.210	ENSORLG00000009467	zgc:158828	99	95.210	Oryzias_latipes
ENSSDUG00000016954	zgc:158828	100	95.136	ENSORLG00020001572	zgc:158828	100	95.136	Oryzias_latipes_hni
ENSSDUG00000016954	zgc:158828	100	95.422	ENSORLG00015018995	zgc:158828	100	95.422	Oryzias_latipes_hsok
ENSSDUG00000016954	zgc:158828	100	95.422	ENSOMEG00000012536	zgc:158828	100	95.422	Oryzias_melastigma
ENSSDUG00000016954	zgc:158828	99	77.811	ENSOGAG00000000954	DHX35	99	77.811	Otolemur_garnettii
ENSSDUG00000016954	zgc:158828	99	77.429	ENSOARG00000000998	DHX35	99	77.429	Ovis_aries
ENSSDUG00000016954	zgc:158828	99	78.254	ENSPPAG00000038372	DHX35	99	78.254	Pan_paniscus
ENSSDUG00000016954	zgc:158828	99	78.107	ENSPPRG00000007005	DHX35	99	78.107	Panthera_pardus
ENSSDUG00000016954	zgc:158828	98	78.399	ENSPTIG00000009935	DHX35	98	78.280	Panthera_tigris_altaica
ENSSDUG00000016954	zgc:158828	99	77.959	ENSPTRG00000013497	DHX35	99	77.959	Pan_troglodytes
ENSSDUG00000016954	zgc:158828	99	78.402	ENSPANG00000016616	DHX35	99	78.402	Papio_anubis
ENSSDUG00000016954	zgc:158828	100	90.963	ENSPKIG00000005719	zgc:158828	100	90.963	Paramormyrops_kingsleyae
ENSSDUG00000016954	zgc:158828	98	79.942	ENSPSIG00000005552	DHX35	96	79.942	Pelodiscus_sinensis
ENSSDUG00000016954	zgc:158828	100	93.630	ENSPMGG00000006967	zgc:158828	100	93.630	Periophthalmus_magnuspinnatus
ENSSDUG00000016954	zgc:158828	99	78.994	ENSPEMG00000021828	Dhx35	99	78.994	Peromyscus_maniculatus_bairdii
ENSSDUG00000016954	zgc:158828	99	57.955	ENSPMAG00000004127	zgc:158828	99	57.670	Petromyzon_marinus
ENSSDUG00000016954	zgc:158828	99	79.857	ENSPCIG00000010725	DHX35	99	79.857	Phascolarctos_cinereus
ENSSDUG00000016954	zgc:158828	99	94.942	ENSPFOG00000007451	zgc:158828	100	94.942	Poecilia_formosa
ENSSDUG00000016954	zgc:158828	100	94.421	ENSPLAG00000023800	zgc:158828	100	94.421	Poecilia_latipinna
ENSSDUG00000016954	zgc:158828	100	94.963	ENSPMEG00000003831	zgc:158828	100	94.963	Poecilia_mexicana
ENSSDUG00000016954	zgc:158828	100	94.519	ENSPREG00000018197	zgc:158828	100	95.039	Poecilia_reticulata
ENSSDUG00000016954	zgc:158828	99	78.143	ENSPPYG00000011007	DHX35	99	78.143	Pongo_abelii
ENSSDUG00000016954	zgc:158828	85	67.241	ENSPCAG00000002107	DHX35	85	67.241	Procavia_capensis
ENSSDUG00000016954	zgc:158828	93	71.429	ENSPCOG00000022032	DHX35	98	71.429	Propithecus_coquereli
ENSSDUG00000016954	zgc:158828	99	71.612	ENSPVAG00000012078	DHX35	99	71.612	Pteropus_vampyrus
ENSSDUG00000016954	zgc:158828	100	97.333	ENSPNYG00000001597	zgc:158828	100	97.333	Pundamilia_nyererei
ENSSDUG00000016954	zgc:158828	100	91.559	ENSPNAG00000023549	zgc:158828	100	91.559	Pygocentrus_nattereri
ENSSDUG00000016954	zgc:158828	99	78.402	ENSRNOG00000015928	Dhx35	99	78.402	Rattus_norvegicus
ENSSDUG00000016954	zgc:158828	99	78.698	ENSRBIG00000036635	DHX35	99	78.698	Rhinopithecus_bieti
ENSSDUG00000016954	zgc:158828	99	78.254	ENSRROG00000031055	DHX35	99	78.254	Rhinopithecus_roxellana
ENSSDUG00000016954	zgc:158828	99	78.107	ENSSBOG00000029157	DHX35	99	78.107	Saimiri_boliviensis_boliviensis
ENSSDUG00000016954	zgc:158828	100	92.418	ENSSFOG00015021820	dhx35	100	92.418	Scleropages_formosus
ENSSDUG00000016954	zgc:158828	100	97.997	ENSSMAG00000008419	zgc:158828	100	97.997	Scophthalmus_maximus
ENSSDUG00000016954	zgc:158828	100	100.000	ENSSLDG00000025317	zgc:158828	100	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000016954	zgc:158828	98	77.711	ENSSPUG00000008996	DHX35	97	77.711	Sphenodon_punctatus
ENSSDUG00000016954	zgc:158828	100	98.222	ENSSPAG00000000687	zgc:158828	100	98.222	Stegastes_partitus
ENSSDUG00000016954	zgc:158828	99	77.857	ENSSSCG00000007352	DHX35	99	78.343	Sus_scrofa
ENSSDUG00000016954	zgc:158828	99	78.714	ENSTGUG00000004620	-	99	78.714	Taeniopygia_guttata
ENSSDUG00000016954	zgc:158828	100	92.704	ENSTRUG00000001011	zgc:158828	100	92.704	Takifugu_rubripes
ENSSDUG00000016954	zgc:158828	82	92.419	ENSTNIG00000017863	zgc:158828	100	92.419	Tetraodon_nigroviridis
ENSSDUG00000016954	zgc:158828	87	73.486	ENSTBEG00000001832	DHX35	87	73.486	Tupaia_belangeri
ENSSDUG00000016954	zgc:158828	99	72.532	ENSTTRG00000007694	DHX35	99	72.532	Tursiops_truncatus
ENSSDUG00000016954	zgc:158828	99	77.858	ENSUAMG00000009681	DHX35	99	77.663	Ursus_americanus
ENSSDUG00000016954	zgc:158828	98	77.074	ENSUMAG00000003211	DHX35	98	77.074	Ursus_maritimus
ENSSDUG00000016954	zgc:158828	99	77.857	ENSVVUG00000029235	DHX35	91	77.857	Vulpes_vulpes
ENSSDUG00000016954	zgc:158828	99	74.538	ENSXETG00000012145	dhx35	99	74.538	Xenopus_tropicalis
ENSSDUG00000016954	zgc:158828	100	94.815	ENSXCOG00000008020	zgc:158828	100	94.815	Xiphophorus_couchianus
ENSSDUG00000016954	zgc:158828	100	95.111	ENSXMAG00000015468	zgc:158828	100	95.111	Xiphophorus_maculatus