EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000016996 (Gene tree)
Gene ID: 111224465
Gene Symbol: wdhd1
Alias: AND-1|wu:fa11f10|wu:fb77d12|zgc:92585
Full Name: WD repeat and HMG-box DNA binding protein 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 14807 bases
Position: chrBDQW01000011.1:3186872-3201678
Accession: 111224465
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000023865	eIF2A	PF08662.11	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000024309	-	3213	-	ENSSDUP00000023865	1070 (aa)	-	-
ENSSDUT00000024429	-	3150	XM_022748967	ENSSDUP00000023980	1049 (aa)	XP_022604688	-
ENSSDUT00000024453	-	3063	-	ENSSDUP00000024004	1020 (aa)	-	-
ENSSDUT00000024476	-	3057	-	ENSSDUP00000024027	1018 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000016996's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000016996's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000016996	wdhd1	99	55.779	ENSG00000198554	WDHD1	99	54.842	Homo_sapiens
ENSSDUG00000016996	wdhd1	99	77.836	ENSAPOG00000001560	wdhd1	100	77.827	Acanthochromis_polyacanthus
ENSSDUG00000016996	wdhd1	99	56.228	ENSAMEG00000014356	WDHD1	100	53.979	Ailuropoda_melanoleuca
ENSSDUG00000016996	wdhd1	100	76.449	ENSACIG00000021530	wdhd1	100	76.993	Amphilophus_citrinellus
ENSSDUG00000016996	wdhd1	100	78.459	ENSAOCG00000018123	wdhd1	100	78.716	Amphiprion_ocellaris
ENSSDUG00000016996	wdhd1	100	78.315	ENSAPEG00000000157	wdhd1	100	78.495	Amphiprion_percula
ENSSDUG00000016996	wdhd1	100	80.157	ENSATEG00000021986	wdhd1	100	79.528	Anabas_testudineus
ENSSDUG00000016996	wdhd1	97	53.866	ENSACAG00000016303	WDHD1	72	60.932	Anolis_carolinensis
ENSSDUG00000016996	wdhd1	100	77.225	ENSACLG00000009036	wdhd1	100	78.002	Astatotilapia_calliptera
ENSSDUG00000016996	wdhd1	74	71.587	ENSAMXG00000043712	wdhd1	99	64.650	Astyanax_mexicanus
ENSSDUG00000016996	wdhd1	99	55.175	ENSBTAG00000019120	WDHD1	99	54.394	Bos_taurus
ENSSDUG00000016996	wdhd1	99	55.536	ENSCJAG00000018208	WDHD1	99	55.911	Callithrix_jacchus
ENSSDUG00000016996	wdhd1	88	55.020	ENSCAFG00000014989	WDHD1	96	54.359	Canis_familiaris
ENSSDUG00000016996	wdhd1	99	55.409	ENSCHIG00000017956	WDHD1	99	54.762	Capra_hircus
ENSSDUG00000016996	wdhd1	99	53.264	ENSTSYG00000000266	WDHD1	99	53.117	Carlito_syrichta
ENSSDUG00000016996	wdhd1	61	57.233	ENSCCAG00000018389	WDHD1	100	58.086	Cebus_capucinus
ENSSDUG00000016996	wdhd1	99	55.614	ENSCATG00000035221	WDHD1	99	55.089	Cercocebus_atys
ENSSDUG00000016996	wdhd1	57	56.942	ENSCLAG00000013863	-	99	55.937	Chinchilla_lanigera
ENSSDUG00000016996	wdhd1	97	54.741	ENSCSAG00000014757	WDHD1	99	54.137	Chlorocebus_sabaeus
ENSSDUG00000016996	wdhd1	100	56.766	ENSCPBG00000020071	WDHD1	73	61.695	Chrysemys_picta_bellii
ENSSDUG00000016996	wdhd1	93	60.993	ENSCANG00000037721	WDHD1	99	60.028	Colobus_angolensis_palliatus
ENSSDUG00000016996	wdhd1	99	67.707	ENSDARG00000015998	wdhd1	99	67.417	Danio_rerio
ENSSDUG00000016996	wdhd1	99	50.655	ENSDNOG00000006661	WDHD1	99	49.525	Dasypus_novemcinctus
ENSSDUG00000016996	wdhd1	99	56.399	ENSECAG00000015412	WDHD1	97	55.127	Equus_caballus
ENSSDUG00000016996	wdhd1	100	70.671	ENSELUG00000015575	wdhd1	100	70.578	Esox_lucius
ENSSDUG00000016996	wdhd1	99	56.042	ENSFCAG00000023408	-	99	54.912	Felis_catus
ENSSDUG00000016996	wdhd1	100	54.410	ENSGALG00000012199	WDHD1	100	53.733	Gallus_gallus
ENSSDUG00000016996	wdhd1	100	60.261	ENSGACG00000017321	wdhd1	100	61.698	Gasterosteus_aculeatus
ENSSDUG00000016996	wdhd1	74	62.861	ENSGAGG00000010665	-	94	60.932	Gopherus_agassizii
ENSSDUG00000016996	wdhd1	99	55.683	ENSGGOG00000007744	WDHD1	99	55.291	Gorilla_gorilla
ENSSDUG00000016996	wdhd1	99	54.570	ENSHGLG00000015105	WDHD1	99	54.255	Heterocephalus_glaber_female
ENSSDUG00000016996	wdhd1	99	54.028	ENSHGLG00100001967	WDHD1	99	52.290	Heterocephalus_glaber_male
ENSSDUG00000016996	wdhd1	100	71.403	ENSHCOG00000007286	wdhd1	100	71.429	Hippocampus_comes
ENSSDUG00000016996	wdhd1	99	55.026	ENSSTOG00000020300	WDHD1	99	53.128	Ictidomys_tridecemlineatus
ENSSDUG00000016996	wdhd1	99	49.736	ENSJJAG00000001164	Wdhd1	99	48.592	Jaculus_jaculus
ENSSDUG00000016996	wdhd1	100	76.532	ENSLBEG00000024847	wdhd1	100	78.284	Labrus_bergylta
ENSSDUG00000016996	wdhd1	73	62.289	ENSLACG00000019053	WDHD1	99	54.278	Latimeria_chalumnae
ENSSDUG00000016996	wdhd1	100	64.583	ENSLOCG00000012086	wdhd1	100	64.087	Lepisosteus_oculatus
ENSSDUG00000016996	wdhd1	99	55.652	ENSLAFG00000005385	WDHD1	100	55.148	Loxodonta_africana
ENSSDUG00000016996	wdhd1	99	55.692	ENSMFAG00000032915	WDHD1	99	55.080	Macaca_fascicularis
ENSSDUG00000016996	wdhd1	99	55.614	ENSMMUG00000000302	WDHD1	99	54.674	Macaca_mulatta
ENSSDUG00000016996	wdhd1	99	55.692	ENSMNEG00000032489	WDHD1	99	55.080	Macaca_nemestrina
ENSSDUG00000016996	wdhd1	99	55.692	ENSMLEG00000035661	WDHD1	99	55.080	Mandrillus_leucophaeus
ENSSDUG00000016996	wdhd1	100	78.158	ENSMAMG00000016742	wdhd1	100	78.150	Mastacembelus_armatus
ENSSDUG00000016996	wdhd1	100	77.225	ENSMZEG00005015228	wdhd1	100	78.002	Maylandia_zebra
ENSSDUG00000016996	wdhd1	100	53.934	ENSMGAG00000013676	WDHD1	100	53.084	Meleagris_gallopavo
ENSSDUG00000016996	wdhd1	99	52.845	ENSMICG00000016239	WDHD1	99	53.421	Microcebus_murinus
ENSSDUG00000016996	wdhd1	100	71.340	ENSMMOG00000007869	wdhd1	100	71.403	Mola_mola
ENSSDUG00000016996	wdhd1	100	54.116	ENSMODG00000011703	WDHD1	100	53.251	Monodelphis_domestica
ENSSDUG00000016996	wdhd1	57	55.677	MGP_CAROLIEiJ_G0019163	Wdhd1	98	54.814	Mus_caroli
ENSSDUG00000016996	wdhd1	57	55.349	MGP_PahariEiJ_G0030180	Wdhd1	98	52.074	Mus_pahari
ENSSDUG00000016996	wdhd1	99	52.696	ENSMPUG00000005542	WDHD1	99	52.235	Mustela_putorius_furo
ENSSDUG00000016996	wdhd1	99	55.575	ENSMLUG00000010353	WDHD1	99	54.737	Myotis_lucifugus
ENSSDUG00000016996	wdhd1	100	77.818	ENSNBRG00000010071	wdhd1	100	78.226	Neolamprologus_brichardi
ENSSDUG00000016996	wdhd1	99	56.587	ENSNLEG00000012760	WDHD1	99	55.929	Nomascus_leucogenys
ENSSDUG00000016996	wdhd1	80	71.681	ENSMEUG00000006706	WDHD1	77	71.681	Notamacropus_eugenii
ENSSDUG00000016996	wdhd1	100	77.641	ENSONIG00000007084	wdhd1	100	77.974	Oreochromis_niloticus
ENSSDUG00000016996	wdhd1	99	55.245	ENSOCUG00000004987	WDHD1	73	60.000	Oryctolagus_cuniculus
ENSSDUG00000016996	wdhd1	94	70.897	ENSORLG00000019721	wdhd1	98	71.347	Oryzias_latipes
ENSSDUG00000016996	wdhd1	100	71.239	ENSORLG00020007040	wdhd1	100	71.416	Oryzias_latipes_hni
ENSSDUG00000016996	wdhd1	100	71.213	ENSORLG00015008848	wdhd1	100	71.479	Oryzias_latipes_hsok
ENSSDUG00000016996	wdhd1	99	53.281	ENSOGAG00000003465	WDHD1	99	51.384	Otolemur_garnettii
ENSSDUG00000016996	wdhd1	99	55.097	ENSOARG00000021081	WDHD1	99	54.042	Ovis_aries
ENSSDUG00000016996	wdhd1	99	55.221	ENSPPAG00000035486	WDHD1	99	54.965	Pan_paniscus
ENSSDUG00000016996	wdhd1	99	56.305	ENSPPRG00000007679	WDHD1	99	55.175	Panthera_pardus
ENSSDUG00000016996	wdhd1	99	56.217	ENSPTIG00000013608	WDHD1	99	55.088	Panthera_tigris_altaica
ENSSDUG00000016996	wdhd1	99	56.311	ENSPTRG00000006366	WDHD1	99	55.703	Pan_troglodytes
ENSSDUG00000016996	wdhd1	99	56.222	ENSPANG00000017506	WDHD1	99	55.575	Papio_anubis
ENSSDUG00000016996	wdhd1	100	60.105	ENSPKIG00000004863	wdhd1	73	67.067	Paramormyrops_kingsleyae
ENSSDUG00000016996	wdhd1	100	54.019	ENSPSIG00000011635	WDHD1	100	53.171	Pelodiscus_sinensis
ENSSDUG00000016996	wdhd1	99	55.263	ENSPPYG00000005834	WDHD1	99	54.714	Pongo_abelii
ENSSDUG00000016996	wdhd1	99	51.446	ENSPVAG00000016064	WDHD1	99	49.825	Pteropus_vampyrus
ENSSDUG00000016996	wdhd1	100	77.491	ENSPNYG00000019115	wdhd1	100	78.374	Pundamilia_nyererei
ENSSDUG00000016996	wdhd1	100	66.319	ENSPNAG00000013823	wdhd1	100	65.412	Pygocentrus_nattereri
ENSSDUG00000016996	wdhd1	99	54.298	ENSRNOG00000011167	Wdhd1	99	53.565	Rattus_norvegicus
ENSSDUG00000016996	wdhd1	99	56.233	ENSRROG00000006993	WDHD1	99	55.674	Rhinopithecus_roxellana
ENSSDUG00000016996	wdhd1	99	52.243	ENSSBOG00000034847	WDHD1	99	51.979	Saimiri_boliviensis_boliviensis
ENSSDUG00000016996	wdhd1	97	52.693	ENSSHAG00000013551	WDHD1	100	52.650	Sarcophilus_harrisii
ENSSDUG00000016996	wdhd1	99	64.349	ENSSFOG00015009950	wdhd1	99	63.733	Scleropages_formosus
ENSSDUG00000016996	wdhd1	100	75.718	ENSSMAG00000007346	wdhd1	100	76.614	Scophthalmus_maximus
ENSSDUG00000016996	wdhd1	100	82.098	ENSSLDG00000021689	wdhd1	100	81.646	Seriola_lalandi_dorsalis
ENSSDUG00000016996	wdhd1	99	56.206	ENSSSCG00000005052	WDHD1	99	55.215	Sus_scrofa
ENSSDUG00000016996	wdhd1	100	73.504	ENSTNIG00000018803	wdhd1	100	72.975	Tetraodon_nigroviridis
ENSSDUG00000016996	wdhd1	99	53.333	ENSTTRG00000003314	WDHD1	99	52.858	Tursiops_truncatus
ENSSDUG00000016996	wdhd1	62	60.458	ENSUAMG00000015360	-	96	59.856	Ursus_americanus
ENSSDUG00000016996	wdhd1	99	55.993	ENSUMAG00000015946	WDHD1	99	54.601	Ursus_maritimus
ENSSDUG00000016996	wdhd1	99	55.254	ENSVPAG00000008394	WDHD1	99	55.302	Vicugna_pacos
ENSSDUG00000016996	wdhd1	99	55.781	ENSVVUG00000029613	WDHD1	99	55.506	Vulpes_vulpes
ENSSDUG00000016996	wdhd1	100	53.993	ENSXETG00000012210	wdhd1	100	53.559	Xenopus_tropicalis