EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000017025 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 7776 bases
Position: chrBDQW01000315.1:43704-51479
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000023404	MMR_HSR1	PF01926.23	6.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000023839	-	4453	-	ENSSDUP00000023404	1248 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000017025's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000017025's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000017025	-	98	42.339	ENSSDUG00000003791	-	97	42.454

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000017025	-	80	44.643	ENSACAG00000028691	-	97	44.643	Anolis_carolinensis
ENSSDUG00000017025	-	98	68.438	ENSACLG00000022932	-	99	68.438	Astatotilapia_calliptera
ENSSDUG00000017025	-	99	43.557	ENSAMXG00000033978	-	97	43.715	Astyanax_mexicanus
ENSSDUG00000017025	-	99	43.434	ENSAMXG00000031410	-	97	43.434	Astyanax_mexicanus
ENSSDUG00000017025	-	72	37.826	ENSCPBG00000009862	-	81	37.744	Chrysemys_picta_bellii
ENSSDUG00000017025	-	98	41.022	ENSELUG00000005671	-	98	41.401	Esox_lucius
ENSSDUG00000017025	-	99	55.208	ENSELUG00000007062	-	97	55.208	Esox_lucius
ENSSDUG00000017025	-	88	46.547	ENSGAGG00000006690	-	99	46.547	Gopherus_agassizii
ENSSDUG00000017025	-	99	65.354	ENSKMAG00000016912	-	98	65.354	Kryptolebias_marmoratus
ENSSDUG00000017025	-	99	69.579	ENSKMAG00000011534	-	99	69.579	Kryptolebias_marmoratus
ENSSDUG00000017025	-	98	42.436	ENSPNAG00000004915	-	97	42.516	Pygocentrus_nattereri
ENSSDUG00000017025	-	99	69.758	ENSSMAG00000004655	-	97	69.839	Scophthalmus_maximus
ENSSDUG00000017025	-	91	86.569	ENSSLDG00000002567	-	99	86.569	Seriola_lalandi_dorsalis
ENSSDUG00000017025	-	57	40.109	ENSSPUG00000001864	-	80	40.109	Sphenodon_punctatus
ENSSDUG00000017025	-	72	42.877	ENSSPUG00000001872	-	88	42.877	Sphenodon_punctatus
ENSSDUG00000017025	-	99	64.393	ENSXMAG00000024425	-	99	64.393	Xiphophorus_maculatus