EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000017071 (Gene tree)
Gene ID: 111227802
Gene Symbol: gpatch3
Alias: zgc:158863
Full Name: G-patch domain containing 3
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 3663 bases
Position: chrBDQW01000191.1:10081155-10084817
Accession: 111227802
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000023470	G-patch	PF01585.23	5.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000023905	-	2174	XM_022753516	ENSSDUP00000023470	512 (aa)	XP_022609237	UPI000BBECFE3

Gene Model

Click here to download ENSSDUG00000017071's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000017071's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000017071	gpatch3	96	53.861	ENSG00000198746	GPATCH3	82	70.968	Homo_sapiens
ENSSDUG00000017071	gpatch3	100	82.718	ENSAPOG00000001212	gpatch3	100	84.466	Acanthochromis_polyacanthus
ENSSDUG00000017071	gpatch3	96	55.179	ENSAMEG00000010801	GPATCH3	94	55.090	Ailuropoda_melanoleuca
ENSSDUG00000017071	gpatch3	100	83.883	ENSAOCG00000019352	gpatch3	100	85.631	Amphiprion_ocellaris
ENSSDUG00000017071	gpatch3	100	83.495	ENSAPEG00000018926	gpatch3	100	85.437	Amphiprion_percula
ENSSDUG00000017071	gpatch3	100	84.405	ENSATEG00000023759	gpatch3	99	84.405	Anabas_testudineus
ENSSDUG00000017071	gpatch3	68	62.784	ENSAPLG00000010745	GPATCH3	100	63.068	Anas_platyrhynchos
ENSSDUG00000017071	gpatch3	96	53.398	ENSACAG00000016709	GPATCH3	94	53.398	Anolis_carolinensis
ENSSDUG00000017071	gpatch3	97	54.475	ENSANAG00000035944	GPATCH3	97	55.361	Aotus_nancymaae
ENSSDUG00000017071	gpatch3	100	84.630	ENSACLG00000012807	gpatch3	99	84.630	Astatotilapia_calliptera
ENSSDUG00000017071	gpatch3	98	63.022	ENSAMXG00000034582	gpatch3	97	62.624	Astyanax_mexicanus
ENSSDUG00000017071	gpatch3	96	56.800	ENSBTAG00000014849	GPATCH3	94	57.200	Bos_taurus
ENSSDUG00000017071	gpatch3	96	36.981	WBGene00019467	K07B1.7	93	36.604	Caenorhabditis_elegans
ENSSDUG00000017071	gpatch3	97	54.669	ENSCJAG00000010000	GPATCH3	95	55.945	Callithrix_jacchus
ENSSDUG00000017071	gpatch3	96	55.976	ENSCAFG00000012265	GPATCH3	94	55.976	Canis_familiaris
ENSSDUG00000017071	gpatch3	96	55.976	ENSCAFG00020021640	GPATCH3	94	55.976	Canis_lupus_dingo
ENSSDUG00000017071	gpatch3	96	55.422	ENSCHIG00000024245	GPATCH3	92	55.823	Capra_hircus
ENSSDUG00000017071	gpatch3	97	53.801	ENSTSYG00000011753	GPATCH3	95	55.294	Carlito_syrichta
ENSSDUG00000017071	gpatch3	63	55.488	ENSCAPG00000007313	GPATCH3	94	55.488	Cavia_aperea
ENSSDUG00000017071	gpatch3	96	55.534	ENSCPOG00000010404	GPATCH3	94	55.534	Cavia_porcellus
ENSSDUG00000017071	gpatch3	97	53.711	ENSCCAG00000030482	GPATCH3	97	55.382	Cebus_capucinus
ENSSDUG00000017071	gpatch3	96	52.174	ENSCATG00000033598	GPATCH3	94	53.242	Cercocebus_atys
ENSSDUG00000017071	gpatch3	96	56.200	ENSCLAG00000012064	GPATCH3	95	56.693	Chinchilla_lanigera
ENSSDUG00000017071	gpatch3	96	56.225	ENSCPBG00000024968	GPATCH3	93	56.225	Chrysemys_picta_bellii
ENSSDUG00000017071	gpatch3	96	54.043	ENSCANG00000036795	GPATCH3	94	55.030	Colobus_angolensis_palliatus
ENSSDUG00000017071	gpatch3	96	56.000	ENSCGRG00001002930	Gpatch3	94	57.200	Cricetulus_griseus_chok1gshd
ENSSDUG00000017071	gpatch3	96	56.000	ENSCGRG00000004699	Gpatch3	94	57.200	Cricetulus_griseus_crigri
ENSSDUG00000017071	gpatch3	100	78.143	ENSCSEG00000005277	gpatch3	100	78.143	Cynoglossus_semilaevis
ENSSDUG00000017071	gpatch3	100	78.295	ENSCVAG00000000827	gpatch3	100	78.295	Cyprinodon_variegatus
ENSSDUG00000017071	gpatch3	96	80.645	ENSDARG00000052747	gpatch3	76	71.875	Danio_rerio
ENSSDUG00000017071	gpatch3	97	55.166	ENSDNOG00000016999	GPATCH3	95	54.669	Dasypus_novemcinctus
ENSSDUG00000017071	gpatch3	96	44.664	ENSEBUG00000013911	gpatch3	91	43.750	Eptatretus_burgeri
ENSSDUG00000017071	gpatch3	97	54.724	ENSEASG00005008636	GPATCH3	95	54.743	Equus_asinus_asinus
ENSSDUG00000017071	gpatch3	97	54.921	ENSECAG00000007653	GPATCH3	95	54.941	Equus_caballus
ENSSDUG00000017071	gpatch3	99	68.726	ENSELUG00000000963	gpatch3	99	68.824	Esox_lucius
ENSSDUG00000017071	gpatch3	96	55.179	ENSFCAG00000012819	GPATCH3	96	54.902	Felis_catus
ENSSDUG00000017071	gpatch3	66	60.350	ENSFALG00000000319	GPATCH3	91	60.350	Ficedula_albicollis
ENSSDUG00000017071	gpatch3	97	54.795	ENSFDAG00000016270	GPATCH3	95	53.816	Fukomys_damarensis
ENSSDUG00000017071	gpatch3	100	76.117	ENSFHEG00000015264	gpatch3	100	75.922	Fundulus_heteroclitus
ENSSDUG00000017071	gpatch3	100	69.455	ENSGMOG00000000991	gpatch3	100	69.844	Gadus_morhua
ENSSDUG00000017071	gpatch3	96	54.691	ENSGALG00000000881	GPATCH3	93	54.709	Gallus_gallus
ENSSDUG00000017071	gpatch3	98	80.990	ENSGAFG00000002531	gpatch3	99	80.990	Gambusia_affinis
ENSSDUG00000017071	gpatch3	100	79.691	ENSGACG00000007199	gpatch3	100	79.884	Gasterosteus_aculeatus
ENSSDUG00000017071	gpatch3	96	57.085	ENSGAGG00000023286	GPATCH3	93	57.085	Gopherus_agassizii
ENSSDUG00000017071	gpatch3	96	54.059	ENSGGOG00000015305	GPATCH3	94	55.118	Gorilla_gorilla
ENSSDUG00000017071	gpatch3	100	84.047	ENSHBUG00000020513	gpatch3	98	88.451	Haplochromis_burtoni
ENSSDUG00000017071	gpatch3	98	54.440	ENSHGLG00000012492	GPATCH3	97	55.405	Heterocephalus_glaber_female
ENSSDUG00000017071	gpatch3	98	54.440	ENSHGLG00100016909	GPATCH3	97	55.405	Heterocephalus_glaber_male
ENSSDUG00000017071	gpatch3	100	77.027	ENSHCOG00000005739	gpatch3	100	76.448	Hippocampus_comes
ENSSDUG00000017071	gpatch3	97	63.550	ENSIPUG00000007697	gpatch3	99	73.994	Ictalurus_punctatus
ENSSDUG00000017071	gpatch3	96	57.455	ENSSTOG00000015220	GPATCH3	94	57.853	Ictidomys_tridecemlineatus
ENSSDUG00000017071	gpatch3	96	55.400	ENSJJAG00000003292	Gpatch3	94	56.461	Jaculus_jaculus
ENSSDUG00000017071	gpatch3	100	77.927	ENSKMAG00000020717	gpatch3	100	77.351	Kryptolebias_marmoratus
ENSSDUG00000017071	gpatch3	99	78.846	ENSLBEG00000007046	gpatch3	99	80.962	Labrus_bergylta
ENSSDUG00000017071	gpatch3	92	71.028	ENSLACG00000011400	GPATCH3	78	72.115	Latimeria_chalumnae
ENSSDUG00000017071	gpatch3	99	64.107	ENSLOCG00000003858	gpatch3	99	63.250	Lepisosteus_oculatus
ENSSDUG00000017071	gpatch3	97	53.996	ENSLAFG00000016691	GPATCH3	96	53.502	Loxodonta_africana
ENSSDUG00000017071	gpatch3	96	54.455	ENSMFAG00000030918	GPATCH3	94	55.010	Macaca_fascicularis
ENSSDUG00000017071	gpatch3	96	54.455	ENSMMUG00000018723	GPATCH3	94	55.010	Macaca_mulatta
ENSSDUG00000017071	gpatch3	87	47.566	ENSMNEG00000033889	GPATCH3	91	47.368	Macaca_nemestrina
ENSSDUG00000017071	gpatch3	96	54.653	ENSMLEG00000033364	GPATCH3	94	55.206	Mandrillus_leucophaeus
ENSSDUG00000017071	gpatch3	100	85.156	ENSMAMG00000023975	gpatch3	100	85.156	Mastacembelus_armatus
ENSSDUG00000017071	gpatch3	100	84.630	ENSMZEG00005019731	gpatch3	99	84.630	Maylandia_zebra
ENSSDUG00000017071	gpatch3	67	61.299	ENSMGAG00000000813	GPATCH3	92	61.449	Meleagris_gallopavo
ENSSDUG00000017071	gpatch3	96	55.078	ENSMAUG00000002005	Gpatch3	94	56.556	Mesocricetus_auratus
ENSSDUG00000017071	gpatch3	97	54.688	ENSMICG00000015656	GPATCH3	95	53.411	Microcebus_murinus
ENSSDUG00000017071	gpatch3	96	54.832	ENSMOCG00000022375	Gpatch3	94	56.751	Microtus_ochrogaster
ENSSDUG00000017071	gpatch3	68	83.237	ENSMMOG00000008963	gpatch3	96	83.237	Mola_mola
ENSSDUG00000017071	gpatch3	97	54.118	ENSMODG00000014417	GPATCH3	94	54.118	Monodelphis_domestica
ENSSDUG00000017071	gpatch3	100	85.603	ENSMALG00000007586	gpatch3	100	85.214	Monopterus_albus
ENSSDUG00000017071	gpatch3	96	56.917	MGP_CAROLIEiJ_G0026594	Gpatch3	94	56.126	Mus_caroli
ENSSDUG00000017071	gpatch3	96	56.496	ENSMUSG00000028850	Gpatch3	94	56.805	Mus_musculus
ENSSDUG00000017071	gpatch3	97	55.754	MGP_PahariEiJ_G0028927	Gpatch3	95	56.548	Mus_pahari
ENSSDUG00000017071	gpatch3	96	56.324	MGP_SPRETEiJ_G0027575	Gpatch3	99	61.850	Mus_spretus
ENSSDUG00000017071	gpatch3	96	55.888	ENSMPUG00000015665	GPATCH3	95	55.206	Mustela_putorius_furo
ENSSDUG00000017071	gpatch3	96	56.400	ENSMLUG00000023528	GPATCH3	94	56.800	Myotis_lucifugus
ENSSDUG00000017071	gpatch3	96	55.534	ENSNGAG00000006821	Gpatch3	94	55.534	Nannospalax_galili
ENSSDUG00000017071	gpatch3	100	77.148	ENSNBRG00000000365	gpatch3	99	76.758	Neolamprologus_brichardi
ENSSDUG00000017071	gpatch3	91	54.219	ENSNLEG00000009387	GPATCH3	92	54.430	Nomascus_leucogenys
ENSSDUG00000017071	gpatch3	96	55.754	ENSMEUG00000003236	GPATCH3	93	55.357	Notamacropus_eugenii
ENSSDUG00000017071	gpatch3	96	55.400	ENSOPRG00000016429	GPATCH3	94	54.400	Ochotona_princeps
ENSSDUG00000017071	gpatch3	97	55.118	ENSODEG00000003292	GPATCH3	95	55.906	Octodon_degus
ENSSDUG00000017071	gpatch3	100	84.630	ENSONIG00000006771	gpatch3	99	84.630	Oreochromis_niloticus
ENSSDUG00000017071	gpatch3	87	56.416	ENSOCUG00000006411	GPATCH3	95	55.022	Oryctolagus_cuniculus
ENSSDUG00000017071	gpatch3	100	73.410	ENSORLG00000004435	gpatch3	100	73.988	Oryzias_latipes
ENSSDUG00000017071	gpatch3	100	73.333	ENSORLG00020022609	gpatch3	100	73.333	Oryzias_latipes_hni
ENSSDUG00000017071	gpatch3	100	74.330	ENSORLG00015008692	gpatch3	100	73.946	Oryzias_latipes_hsok
ENSSDUG00000017071	gpatch3	100	76.413	ENSOMEG00000010991	gpatch3	100	76.608	Oryzias_melastigma
ENSSDUG00000017071	gpatch3	96	54.420	ENSOGAG00000011647	GPATCH3	95	54.012	Otolemur_garnettii
ENSSDUG00000017071	gpatch3	96	55.600	ENSOARG00000003955	GPATCH3	91	55.422	Ovis_aries
ENSSDUG00000017071	gpatch3	96	54.059	ENSPPAG00000032902	GPATCH3	94	54.902	Pan_paniscus
ENSSDUG00000017071	gpatch3	96	55.268	ENSPPRG00000024244	GPATCH3	96	55.294	Panthera_pardus
ENSSDUG00000017071	gpatch3	96	54.813	ENSPTIG00000014693	GPATCH3	96	54.264	Panthera_tigris_altaica
ENSSDUG00000017071	gpatch3	96	53.861	ENSPTRG00000023419	GPATCH3	94	54.706	Pan_troglodytes
ENSSDUG00000017071	gpatch3	96	54.653	ENSPANG00000007984	GPATCH3	94	55.206	Papio_anubis
ENSSDUG00000017071	gpatch3	99	67.578	ENSPKIG00000020073	gpatch3	97	67.578	Paramormyrops_kingsleyae
ENSSDUG00000017071	gpatch3	77	60.848	ENSPSIG00000017160	GPATCH3	95	60.848	Pelodiscus_sinensis
ENSSDUG00000017071	gpatch3	100	74.219	ENSPMGG00000001703	gpatch3	100	75.391	Periophthalmus_magnuspinnatus
ENSSDUG00000017071	gpatch3	97	55.728	ENSPEMG00000020632	Gpatch3	95	55.962	Peromyscus_maniculatus_bairdii
ENSSDUG00000017071	gpatch3	97	56.189	ENSPCIG00000012681	GPATCH3	94	55.206	Phascolarctos_cinereus
ENSSDUG00000017071	gpatch3	100	79.922	ENSPFOG00000009928	gpatch3	100	80.117	Poecilia_formosa
ENSSDUG00000017071	gpatch3	100	79.537	ENSPLAG00000023784	gpatch3	100	79.730	Poecilia_latipinna
ENSSDUG00000017071	gpatch3	100	79.537	ENSPMEG00000010268	gpatch3	100	79.923	Poecilia_mexicana
ENSSDUG00000017071	gpatch3	98	79.447	ENSPREG00000008873	gpatch3	98	79.249	Poecilia_reticulata
ENSSDUG00000017071	gpatch3	96	54.348	ENSPPYG00000001675	GPATCH3	94	55.599	Pongo_abelii
ENSSDUG00000017071	gpatch3	96	53.021	ENSPCAG00000008286	GPATCH3	94	54.724	Procavia_capensis
ENSSDUG00000017071	gpatch3	97	53.668	ENSPCOG00000020145	GPATCH3	95	54.951	Propithecus_coquereli
ENSSDUG00000017071	gpatch3	96	51.690	ENSPVAG00000017282	GPATCH3	95	50.295	Pteropus_vampyrus
ENSSDUG00000017071	gpatch3	98	84.356	ENSPNYG00000005172	gpatch3	100	84.356	Pundamilia_nyererei
ENSSDUG00000017071	gpatch3	99	65.720	ENSPNAG00000018501	gpatch3	99	64.449	Pygocentrus_nattereri
ENSSDUG00000017071	gpatch3	96	56.213	ENSRNOG00000007097	Gpatch3	94	57.285	Rattus_norvegicus
ENSSDUG00000017071	gpatch3	96	54.150	ENSRBIG00000005853	GPATCH3	94	54.743	Rhinopithecus_bieti
ENSSDUG00000017071	gpatch3	96	53.360	ENSRROG00000038382	GPATCH3	94	54.545	Rhinopithecus_roxellana
ENSSDUG00000017071	gpatch3	97	53.981	ENSSBOG00000019680	GPATCH3	95	61.648	Saimiri_boliviensis_boliviensis
ENSSDUG00000017071	gpatch3	97	54.369	ENSSHAG00000014268	GPATCH3	95	54.845	Sarcophilus_harrisii
ENSSDUG00000017071	gpatch3	100	66.730	ENSSFOG00015009602	gpatch3	100	66.730	Scleropages_formosus
ENSSDUG00000017071	gpatch3	100	83.721	ENSSMAG00000002067	gpatch3	100	83.721	Scophthalmus_maximus
ENSSDUG00000017071	gpatch3	100	99.609	ENSSLDG00000016549	gpatch3	100	99.609	Seriola_lalandi_dorsalis
ENSSDUG00000017071	gpatch3	97	55.446	ENSSPUG00000018299	GPATCH3	95	54.545	Sphenodon_punctatus
ENSSDUG00000017071	gpatch3	100	83.333	ENSSPAG00000013046	gpatch3	100	83.915	Stegastes_partitus
ENSSDUG00000017071	gpatch3	97	54.971	ENSSSCG00000003564	GPATCH3	93	55.556	Sus_scrofa
ENSSDUG00000017071	gpatch3	78	56.110	ENSTGUG00000000986	GPATCH3	98	57.107	Taeniopygia_guttata
ENSSDUG00000017071	gpatch3	100	75.143	ENSTRUG00000013294	gpatch3	100	75.143	Takifugu_rubripes
ENSSDUG00000017071	gpatch3	98	76.541	ENSTNIG00000009657	gpatch3	99	76.541	Tetraodon_nigroviridis
ENSSDUG00000017071	gpatch3	78	58.974	ENSTBEG00000002042	GPATCH3	83	58.974	Tupaia_belangeri
ENSSDUG00000017071	gpatch3	96	51.406	ENSTTRG00000016677	GPATCH3	83	68.750	Tursiops_truncatus
ENSSDUG00000017071	gpatch3	96	55.378	ENSUAMG00000026235	GPATCH3	94	55.289	Ursus_americanus
ENSSDUG00000017071	gpatch3	96	55.578	ENSUMAG00000011894	GPATCH3	94	55.489	Ursus_maritimus
ENSSDUG00000017071	gpatch3	96	56.375	ENSVVUG00000012041	GPATCH3	94	55.600	Vulpes_vulpes
ENSSDUG00000017071	gpatch3	97	51.277	ENSXETG00000030345	GPATCH3	100	50.491	Xenopus_tropicalis
ENSSDUG00000017071	gpatch3	100	71.484	ENSXCOG00000016129	gpatch3	100	71.094	Xiphophorus_couchianus
ENSSDUG00000017071	gpatch3	100	79.572	ENSXMAG00000010749	gpatch3	100	79.572	Xiphophorus_maculatus