EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000017102 (Gene tree)
Gene ID: 111220503
Gene Symbol: zfhx3
Alias: fd23d06|fj32b02|im:7148790|wu:fd23d06|wu:fj32b02
Full Name: zinc finger homeobox 3
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 88390 bases
Position: chrBDQW01000003.1:165621-254010
Accession: 111220503
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000023556	zf-C2H2	PF00096.26	2.4e-08	1	2
ENSSDUP00000023556	zf-C2H2	PF00096.26	2.4e-08	2	2
ENSSDUP00000023591	zf-C2H2	PF00096.26	1e-07	1	2
ENSSDUP00000023591	zf-C2H2	PF00096.26	1e-07	2	2
ENSSDUP00000023620	zf-C2H2	PF00096.26	1.9e-05	1	1
ENSSDUP00000023620	zf-met	PF12874.7	1.2e-09	1	2
ENSSDUP00000023620	zf-met	PF12874.7	1.2e-09	2	2
ENSSDUP00000023591	zf-met	PF12874.7	1.5e-09	1	1
ENSSDUP00000023556	zf-met	PF12874.7	5.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000024028	-	10923	-	ENSSDUP00000023591	3640 (aa)	-	-
ENSSDUT00000023991	-	11589	XM_022743576	ENSSDUP00000023556	3862 (aa)	XP_022599297	-
ENSSDUT00000024058	-	3477	-	ENSSDUP00000023620	1158 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000017102's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000017102's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000017102	zfhx3	100	94.593	ENSAPOG00000010102	zfhx3	100	94.855	Acanthochromis_polyacanthus
ENSSDUG00000017102	zfhx3	100	92.680	ENSACIG00000000652	zfhx3	98	94.987	Amphilophus_citrinellus
ENSSDUG00000017102	zfhx3	100	94.347	ENSAPEG00000011530	zfhx3	100	94.528	Amphiprion_percula
ENSSDUG00000017102	zfhx3	100	93.371	ENSATEG00000004640	zfhx3	100	92.977	Anabas_testudineus
ENSSDUG00000017102	zfhx3	87	73.097	ENSAPLG00000002327	ZFHX3	87	67.988	Anas_platyrhynchos
ENSSDUG00000017102	zfhx3	100	92.918	ENSACLG00000001914	zfhx3	100	92.344	Astatotilapia_calliptera
ENSSDUG00000017102	zfhx3	100	83.446	ENSAMXG00000004340	zfhx3	95	89.655	Astyanax_mexicanus
ENSSDUG00000017102	zfhx3	97	75.205	ENSBTAG00000014636	ZFHX3	86	66.871	Bos_taurus
ENSSDUG00000017102	zfhx3	97	75.273	ENSCJAG00000043080	ZFHX3	93	66.347	Callithrix_jacchus
ENSSDUG00000017102	zfhx3	97	76.891	ENSCHIG00000018446	ZFHX3	86	66.400	Capra_hircus
ENSSDUG00000017102	zfhx3	97	74.727	ENSCSAG00000004171	ZFHX3	52	65.350	Chlorocebus_sabaeus
ENSSDUG00000017102	zfhx3	97	75.485	ENSCGRG00001012831	Zfhx3	90	66.631	Cricetulus_griseus_chok1gshd
ENSSDUG00000017102	zfhx3	100	88.396	ENSCSEG00000001762	zfhx3	100	87.777	Cynoglossus_semilaevis
ENSSDUG00000017102	zfhx3	100	89.453	ENSCVAG00000000602	zfhx3	100	88.912	Cyprinodon_variegatus
ENSSDUG00000017102	zfhx3	100	82.527	ENSDARG00000103057	zfhx3	98	89.655	Danio_rerio
ENSSDUG00000017102	zfhx3	97	74.761	ENSDNOG00000046047	ZFHX3	86	66.359	Dasypus_novemcinctus
ENSSDUG00000017102	zfhx3	100	85.597	ENSELUG00000014311	zfhx3	100	85.265	Esox_lucius
ENSSDUG00000017102	zfhx3	93	66.452	ENSFALG00000002706	ZFHX3	84	68.174	Ficedula_albicollis
ENSSDUG00000017102	zfhx3	100	90.654	ENSFHEG00000013474	zfhx3	100	90.422	Fundulus_heteroclitus
ENSSDUG00000017102	zfhx3	100	84.181	ENSGMOG00000002909	zfhx3	100	83.944	Gadus_morhua
ENSSDUG00000017102	zfhx3	97	64.058	ENSGALG00000000713	ZFHX3	86	66.249	Gallus_gallus
ENSSDUG00000017102	zfhx3	100	90.433	ENSGAFG00000017278	zfhx3	100	90.949	Gambusia_affinis
ENSSDUG00000017102	zfhx3	99	93.333	ENSGACG00000015779	zfhx3	98	93.103	Gasterosteus_aculeatus
ENSSDUG00000017102	zfhx3	100	93.010	ENSHBUG00000013200	zfhx3	100	92.473	Haplochromis_burtoni
ENSSDUG00000017102	zfhx3	100	87.929	ENSHCOG00000003135	zfhx3	100	87.532	Hippocampus_comes
ENSSDUG00000017102	zfhx3	100	81.109	ENSIPUG00000006119	zfhx3	98	87.931	Ictalurus_punctatus
ENSSDUG00000017102	zfhx3	100	90.832	ENSKMAG00000006781	zfhx3	100	91.001	Kryptolebias_marmoratus
ENSSDUG00000017102	zfhx3	100	92.558	ENSLBEG00000026326	zfhx3	98	94.828	Labrus_bergylta
ENSSDUG00000017102	zfhx3	100	79.528	ENSLOCG00000004206	zfhx3	100	79.644	Lepisosteus_oculatus
ENSSDUG00000017102	zfhx3	97	74.932	ENSMFAG00000034225	ZFHX3	93	66.368	Macaca_fascicularis
ENSSDUG00000017102	zfhx3	97	74.932	ENSMMUG00000021041	ZFHX3	93	66.368	Macaca_mulatta
ENSSDUG00000017102	zfhx3	97	74.932	ENSMNEG00000030137	ZFHX3	93	66.261	Macaca_nemestrina
ENSSDUG00000017102	zfhx3	100	94.128	ENSMAMG00000021509	zfhx3	100	94.046	Mastacembelus_armatus
ENSSDUG00000017102	zfhx3	100	92.958	ENSMZEG00005014216	zfhx3	100	92.421	Maylandia_zebra
ENSSDUG00000017102	zfhx3	77	71.530	ENSMGAG00000008764	ZFHX3	97	72.052	Meleagris_gallopavo
ENSSDUG00000017102	zfhx3	97	74.324	ENSMICG00000003537	ZFHX3	53	65.369	Microcebus_murinus
ENSSDUG00000017102	zfhx3	97	75.205	ENSMOCG00000017998	Zfhx3	94	65.015	Microtus_ochrogaster
ENSSDUG00000017102	zfhx3	100	91.962	ENSMMOG00000016551	zfhx3	98	94.828	Mola_mola
ENSSDUG00000017102	zfhx3	100	94.154	ENSMALG00000021055	zfhx3	100	93.870	Monopterus_albus
ENSSDUG00000017102	zfhx3	100	71.739	MGP_SPRETEiJ_G0032657	Zfhx3	97	64.209	Mus_spretus
ENSSDUG00000017102	zfhx3	97	76.349	ENSMLUG00000016100	ZFHX3	86	66.584	Myotis_lucifugus
ENSSDUG00000017102	zfhx3	97	75.451	ENSNGAG00000001724	Zfhx3	86	65.844	Nannospalax_galili
ENSSDUG00000017102	zfhx3	100	92.345	ENSNBRG00000010822	zfhx3	100	92.680	Neolamprologus_brichardi
ENSSDUG00000017102	zfhx3	88	89.873	ENSNLEG00000032567	ZFHX3	83	89.873	Nomascus_leucogenys
ENSSDUG00000017102	zfhx3	96	82.526	ENSONIG00000005914	zfhx3	97	96.262	Oreochromis_niloticus
ENSSDUG00000017102	zfhx3	98	75.101	ENSOANG00000005084	ZFHX3	97	65.207	Ornithorhynchus_anatinus
ENSSDUG00000017102	zfhx3	100	88.714	ENSORLG00000007874	zfhx3	100	87.983	Oryzias_latipes
ENSSDUG00000017102	zfhx3	100	88.766	ENSORLG00020009729	zfhx3	100	87.880	Oryzias_latipes_hni
ENSSDUG00000017102	zfhx3	100	88.250	ENSORLG00015007912	zfhx3	100	87.880	Oryzias_latipes_hsok
ENSSDUG00000017102	zfhx3	100	89.791	ENSOMEG00000001800	zfhx3	100	88.829	Oryzias_melastigma
ENSSDUG00000017102	zfhx3	97	76.487	ENSPPRG00000005184	ZFHX3	52	64.604	Panthera_pardus
ENSSDUG00000017102	zfhx3	97	74.795	ENSPANG00000010456	ZFHX3	82	71.018	Papio_anubis
ENSSDUG00000017102	zfhx3	98	77.267	ENSPKIG00000001525	-	99	74.768	Paramormyrops_kingsleyae
ENSSDUG00000017102	zfhx3	96	78.604	ENSPKIG00000009598	zfhx3	98	80.195	Paramormyrops_kingsleyae
ENSSDUG00000017102	zfhx3	100	85.998	ENSPMGG00000006062	zfhx3	100	85.489	Periophthalmus_magnuspinnatus
ENSSDUG00000017102	zfhx3	97	75.485	ENSPEMG00000010630	Zfhx3	97	64.243	Peromyscus_maniculatus_bairdii
ENSSDUG00000017102	zfhx3	100	90.306	ENSPFOG00000001702	zfhx3	100	90.460	Poecilia_formosa
ENSSDUG00000017102	zfhx3	100	90.571	ENSPLAG00000018955	zfhx3	100	90.829	Poecilia_latipinna
ENSSDUG00000017102	zfhx3	100	90.023	ENSPMEG00000022333	zfhx3	100	90.280	Poecilia_mexicana
ENSSDUG00000017102	zfhx3	100	90.183	ENSPREG00000023212	zfhx3	100	90.287	Poecilia_reticulata
ENSSDUG00000017102	zfhx3	96	76.699	ENSPCAG00000010600	ZFHX3	99	65.754	Procavia_capensis
ENSSDUG00000017102	zfhx3	83	72.193	ENSPVAG00000006664	ZFHX3	53	65.523	Pteropus_vampyrus
ENSSDUG00000017102	zfhx3	100	93.307	ENSPNYG00000013409	zfhx3	100	92.811	Pundamilia_nyererei
ENSSDUG00000017102	zfhx3	57	87.840	ENSPNAG00000004953	-	98	84.859	Pygocentrus_nattereri
ENSSDUG00000017102	zfhx3	97	74.795	ENSRROG00000039904	ZFHX3	82	71.018	Rhinopithecus_roxellana
ENSSDUG00000017102	zfhx3	91	64.249	ENSSBOG00000034332	ZFHX3	81	67.788	Saimiri_boliviensis_boliviensis
ENSSDUG00000017102	zfhx3	100	78.914	ENSSFOG00015014986	zfhx3	98	82.759	Scleropages_formosus
ENSSDUG00000017102	zfhx3	100	75.986	ENSSFOG00015019511	zfhx3	99	76.377	Scleropages_formosus
ENSSDUG00000017102	zfhx3	100	92.888	ENSSMAG00000000110	zfhx3	98	94.828	Scophthalmus_maximus
ENSSDUG00000017102	zfhx3	100	99.022	ENSSLDG00000013212	zfhx3	100	99.022	Seriola_lalandi_dorsalis
ENSSDUG00000017102	zfhx3	100	93.697	ENSSPAG00000002113	zfhx3	100	93.758	Stegastes_partitus
ENSSDUG00000017102	zfhx3	89	71.186	ENSTGUG00000008190	ZFHX3	73	73.817	Taeniopygia_guttata
ENSSDUG00000017102	zfhx3	100	89.021	ENSTRUG00000017601	zfhx3	100	88.840	Takifugu_rubripes
ENSSDUG00000017102	zfhx3	58	87.660	ENSXCOG00000011329	-	97	90.099	Xiphophorus_couchianus
ENSSDUG00000017102	zfhx3	100	90.415	ENSXMAG00000027288	zfhx3	100	90.544	Xiphophorus_maculatus