EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000017106 (Gene tree)
Gene ID: 111232368
Gene Symbol: trpt1
Alias: zgc:113138
Full Name: tRNA phosphotransferase 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 3116 bases
Position: chrBDQW01000331.1:2603653-2606768
Accession: 111232368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000023520	PTS_2-RNA	PF01885.16	3e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000023955	-	746	XM_022759854	ENSSDUP00000023520	226 (aa)	XP_022615575	UPI000BBEAF5D

Gene Model

Click here to download ENSSDUG00000017106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000017106's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000017106	trpt1	99	58.261	ENSG00000149743	TRPT1	98	50.867	Homo_sapiens
ENSSDUG00000017106	trpt1	92	87.923	ENSAPOG00000012925	trpt1	90	87.923	Acanthochromis_polyacanthus
ENSSDUG00000017106	trpt1	91	58.937	ENSAMEG00000018040	TRPT1	81	58.937	Ailuropoda_melanoleuca
ENSSDUG00000017106	trpt1	87	85.279	ENSACIG00000022413	trpt1	88	84.848	Amphilophus_citrinellus
ENSSDUG00000017106	trpt1	92	88.406	ENSAOCG00000001163	trpt1	78	88.406	Amphiprion_ocellaris
ENSSDUG00000017106	trpt1	92	87.923	ENSAPEG00000009873	trpt1	90	87.923	Amphiprion_percula
ENSSDUG00000017106	trpt1	92	87.440	ENSATEG00000014371	trpt1	91	87.440	Anabas_testudineus
ENSSDUG00000017106	trpt1	90	60.294	ENSACAG00000000696	TRPT1	90	60.294	Anolis_carolinensis
ENSSDUG00000017106	trpt1	99	59.307	ENSANAG00000019580	TRPT1	81	60.386	Aotus_nancymaae
ENSSDUG00000017106	trpt1	92	88.406	ENSACLG00000016893	trpt1	90	88.406	Astatotilapia_calliptera
ENSSDUG00000017106	trpt1	92	72.464	ENSAMXG00000010533	trpt1	91	72.464	Astyanax_mexicanus
ENSSDUG00000017106	trpt1	99	56.466	ENSBTAG00000016555	TRPT1	88	58.242	Bos_taurus
ENSSDUG00000017106	trpt1	99	58.621	ENSCJAG00000018169	TRPT1	81	60.577	Callithrix_jacchus
ENSSDUG00000017106	trpt1	91	59.420	ENSCAFG00000014591	TRPT1	82	58.937	Canis_familiaris
ENSSDUG00000017106	trpt1	91	59.420	ENSCAFG00020014101	TRPT1	83	59.420	Canis_lupus_dingo
ENSSDUG00000017106	trpt1	98	56.696	ENSCHIG00000021308	TRPT1	82	58.454	Capra_hircus
ENSSDUG00000017106	trpt1	78	55.056	ENSTSYG00000026766	TRPT1	88	55.307	Carlito_syrichta
ENSSDUG00000017106	trpt1	93	57.820	ENSCAPG00000016934	TRPT1	85	58.252	Cavia_aperea
ENSSDUG00000017106	trpt1	96	57.339	ENSCPOG00000002923	TRPT1	82	58.252	Cavia_porcellus
ENSSDUG00000017106	trpt1	78	60.112	ENSCCAG00000025683	TRPT1	98	51.765	Cebus_capucinus
ENSSDUG00000017106	trpt1	99	57.759	ENSCATG00000031563	TRPT1	81	58.654	Cercocebus_atys
ENSSDUG00000017106	trpt1	98	56.306	ENSCLAG00000016380	TRPT1	81	57.282	Chinchilla_lanigera
ENSSDUG00000017106	trpt1	99	57.576	ENSCSAG00000006952	TRPT1	81	58.454	Chlorocebus_sabaeus
ENSSDUG00000017106	trpt1	64	43.151	ENSCING00000002405	-	77	43.151	Ciona_intestinalis
ENSSDUG00000017106	trpt1	87	38.462	ENSCING00000024241	-	81	38.462	Ciona_intestinalis
ENSSDUG00000017106	trpt1	89	41.627	ENSCSAVG00000003949	-	88	42.132	Ciona_savignyi
ENSSDUG00000017106	trpt1	88	40.887	ENSCSAVG00000011071	-	60	41.969	Ciona_savignyi
ENSSDUG00000017106	trpt1	99	57.328	ENSCANG00000042980	TRPT1	81	58.654	Colobus_angolensis_palliatus
ENSSDUG00000017106	trpt1	97	59.009	ENSCGRG00001008474	Trpt1	82	59.420	Cricetulus_griseus_chok1gshd
ENSSDUG00000017106	trpt1	97	59.009	ENSCGRG00000009793	Trpt1	82	59.420	Cricetulus_griseus_crigri
ENSSDUG00000017106	trpt1	90	82.759	ENSCSEG00000005840	trpt1	86	83.000	Cynoglossus_semilaevis
ENSSDUG00000017106	trpt1	96	79.263	ENSCVAG00000006318	trpt1	95	80.676	Cyprinodon_variegatus
ENSSDUG00000017106	trpt1	88	70.854	ENSDARG00000037628	trpt1	88	70.854	Danio_rerio
ENSSDUG00000017106	trpt1	91	51.456	ENSDNOG00000044923	TRPT1	69	51.031	Dasypus_novemcinctus
ENSSDUG00000017106	trpt1	98	55.405	ENSDORG00000001624	Trpt1	84	57.282	Dipodomys_ordii
ENSSDUG00000017106	trpt1	85	40.206	FBgn0053057	CG33057	90	40.206	Drosophila_melanogaster
ENSSDUG00000017106	trpt1	92	51.887	ENSEBUG00000012569	-	90	51.765	Eptatretus_burgeri
ENSSDUG00000017106	trpt1	99	57.143	ENSEASG00005019983	TRPT1	81	58.937	Equus_asinus_asinus
ENSSDUG00000017106	trpt1	99	55.844	ENSECAG00000009917	TRPT1	98	49.171	Equus_caballus
ENSSDUG00000017106	trpt1	97	58.182	ENSEEUG00000012739	TRPT1	81	58.937	Erinaceus_europaeus
ENSSDUG00000017106	trpt1	92	77.295	ENSELUG00000007385	trpt1	90	77.295	Esox_lucius
ENSSDUG00000017106	trpt1	99	56.710	ENSFCAG00000024621	TRPT1	88	57.143	Felis_catus
ENSSDUG00000017106	trpt1	96	57.078	ENSFDAG00000002738	TRPT1	81	57.971	Fukomys_damarensis
ENSSDUG00000017106	trpt1	92	84.541	ENSFHEG00000002434	trpt1	90	84.541	Fundulus_heteroclitus
ENSSDUG00000017106	trpt1	89	73.762	ENSGMOG00000008716	trpt1	98	73.762	Gadus_morhua
ENSSDUG00000017106	trpt1	88	53.500	ENSGALG00000050256	TRPT1	67	53.500	Gallus_gallus
ENSSDUG00000017106	trpt1	92	82.126	ENSGAFG00000016762	trpt1	92	82.126	Gambusia_affinis
ENSSDUG00000017106	trpt1	88	83.500	ENSGACG00000016927	trpt1	95	83.721	Gasterosteus_aculeatus
ENSSDUG00000017106	trpt1	99	58.696	ENSGGOG00000012163	TRPT1	81	60.194	Gorilla_gorilla
ENSSDUG00000017106	trpt1	92	88.889	ENSHBUG00000012772	trpt1	90	88.889	Haplochromis_burtoni
ENSSDUG00000017106	trpt1	99	56.087	ENSHGLG00000013748	TRPT1	81	57.971	Heterocephalus_glaber_female
ENSSDUG00000017106	trpt1	99	56.087	ENSHGLG00100013048	TRPT1	81	57.971	Heterocephalus_glaber_male
ENSSDUG00000017106	trpt1	91	81.553	ENSHCOG00000000218	trpt1	89	81.553	Hippocampus_comes
ENSSDUG00000017106	trpt1	92	66.667	ENSIPUG00000002573	trpt1	90	66.667	Ictalurus_punctatus
ENSSDUG00000017106	trpt1	95	58.796	ENSSTOG00000014285	TRPT1	81	59.420	Ictidomys_tridecemlineatus
ENSSDUG00000017106	trpt1	99	56.637	ENSJJAG00000010855	Trpt1	83	59.420	Jaculus_jaculus
ENSSDUG00000017106	trpt1	92	82.126	ENSKMAG00000004214	trpt1	90	82.126	Kryptolebias_marmoratus
ENSSDUG00000017106	trpt1	91	86.341	ENSLBEG00000005640	trpt1	89	86.829	Labrus_bergylta
ENSSDUG00000017106	trpt1	91	61.165	ENSLACG00000016922	TRPT1	85	60.870	Latimeria_chalumnae
ENSSDUG00000017106	trpt1	92	66.184	ENSLOCG00000001345	trpt1	84	66.184	Lepisosteus_oculatus
ENSSDUG00000017106	trpt1	96	57.534	ENSLAFG00000009075	TRPT1	81	57.971	Loxodonta_africana
ENSSDUG00000017106	trpt1	99	57.759	ENSMFAG00000036828	TRPT1	81	58.654	Macaca_fascicularis
ENSSDUG00000017106	trpt1	99	58.261	ENSMMUG00000012940	TRPT1	81	59.223	Macaca_mulatta
ENSSDUG00000017106	trpt1	99	57.759	ENSMNEG00000033348	TRPT1	81	58.654	Macaca_nemestrina
ENSSDUG00000017106	trpt1	99	56.897	ENSMLEG00000031438	TRPT1	87	52.525	Mandrillus_leucophaeus
ENSSDUG00000017106	trpt1	92	89.372	ENSMAMG00000021617	trpt1	90	89.372	Mastacembelus_armatus
ENSSDUG00000017106	trpt1	92	88.889	ENSMZEG00005004773	trpt1	90	88.889	Maylandia_zebra
ENSSDUG00000017106	trpt1	75	59.302	ENSMAUG00000014107	Trpt1	82	59.302	Mesocricetus_auratus
ENSSDUG00000017106	trpt1	96	58.447	ENSMICG00000016950	TRPT1	88	52.000	Microcebus_murinus
ENSSDUG00000017106	trpt1	97	59.910	ENSMOCG00000021342	Trpt1	82	60.386	Microtus_ochrogaster
ENSSDUG00000017106	trpt1	88	85.500	ENSMMOG00000002896	trpt1	86	85.500	Mola_mola
ENSSDUG00000017106	trpt1	92	59.330	ENSMODG00000010226	TRPT1	89	59.391	Monodelphis_domestica
ENSSDUG00000017106	trpt1	92	88.889	ENSMALG00000012208	trpt1	84	88.889	Monopterus_albus
ENSSDUG00000017106	trpt1	97	58.371	MGP_CAROLIEiJ_G0022627	Trpt1	82	58.738	Mus_caroli
ENSSDUG00000017106	trpt1	97	58.371	ENSMUSG00000047656	Trpt1	82	58.738	Mus_musculus
ENSSDUG00000017106	trpt1	99	58.150	MGP_PahariEiJ_G0014121	Trpt1	82	59.420	Mus_pahari
ENSSDUG00000017106	trpt1	97	58.824	MGP_SPRETEiJ_G0023537	Trpt1	82	59.223	Mus_spretus
ENSSDUG00000017106	trpt1	99	58.261	ENSMPUG00000013272	TRPT1	75	59.420	Mustela_putorius_furo
ENSSDUG00000017106	trpt1	91	59.420	ENSMLUG00000024858	TRPT1	81	59.420	Myotis_lucifugus
ENSSDUG00000017106	trpt1	80	58.791	ENSNGAG00000007665	Trpt1	88	58.791	Nannospalax_galili
ENSSDUG00000017106	trpt1	92	82.883	ENSNBRG00000001528	trpt1	91	82.883	Neolamprologus_brichardi
ENSSDUG00000017106	trpt1	90	48.544	ENSNLEG00000033525	-	88	47.802	Nomascus_leucogenys
ENSSDUG00000017106	trpt1	91	58.738	ENSMEUG00000000943	TRPT1	81	58.738	Notamacropus_eugenii
ENSSDUG00000017106	trpt1	99	58.442	ENSOPRG00000015917	TRPT1	82	59.903	Ochotona_princeps
ENSSDUG00000017106	trpt1	99	56.034	ENSODEG00000015724	TRPT1	83	58.173	Octodon_degus
ENSSDUG00000017106	trpt1	92	86.473	ENSONIG00000005333	trpt1	90	86.473	Oreochromis_niloticus
ENSSDUG00000017106	trpt1	89	51.232	ENSOANG00000010375	TRPT1	89	51.232	Ornithorhynchus_anatinus
ENSSDUG00000017106	trpt1	95	58.525	ENSOCUG00000022244	TRPT1	82	58.937	Oryctolagus_cuniculus
ENSSDUG00000017106	trpt1	98	78.281	ENSORLG00000025159	trpt1	93	81.553	Oryzias_latipes
ENSSDUG00000017106	trpt1	99	78.222	ENSORLG00020018944	trpt1	92	81.553	Oryzias_latipes_hni
ENSSDUG00000017106	trpt1	79	82.682	ENSORLG00015017108	trpt1	79	82.682	Oryzias_latipes_hsok
ENSSDUG00000017106	trpt1	100	79.646	ENSOMEG00000018645	trpt1	92	82.609	Oryzias_melastigma
ENSSDUG00000017106	trpt1	96	57.798	ENSOGAG00000007134	TRPT1	81	58.654	Otolemur_garnettii
ENSSDUG00000017106	trpt1	98	57.143	ENSOARG00000004961	TRPT1	81	58.937	Ovis_aries
ENSSDUG00000017106	trpt1	95	51.802	ENSPPAG00000027600	TRPT1	88	59.116	Pan_paniscus
ENSSDUG00000017106	trpt1	80	57.692	ENSPPRG00000022870	TRPT1	88	57.692	Panthera_pardus
ENSSDUG00000017106	trpt1	78	57.865	ENSPTIG00000018872	TRPT1	96	49.708	Panthera_tigris_altaica
ENSSDUG00000017106	trpt1	95	51.802	ENSPTRG00000003822	TRPT1	88	59.116	Pan_troglodytes
ENSSDUG00000017106	trpt1	99	57.328	ENSPANG00000011001	TRPT1	81	58.173	Papio_anubis
ENSSDUG00000017106	trpt1	91	68.447	ENSPKIG00000008323	trpt1	89	68.447	Paramormyrops_kingsleyae
ENSSDUG00000017106	trpt1	98	56.561	ENSPSIG00000009910	TRPT1	86	57.282	Pelodiscus_sinensis
ENSSDUG00000017106	trpt1	90	76.847	ENSPMGG00000005037	trpt1	89	77.500	Periophthalmus_magnuspinnatus
ENSSDUG00000017106	trpt1	97	58.559	ENSPEMG00000013720	Trpt1	82	59.420	Peromyscus_maniculatus_bairdii
ENSSDUG00000017106	trpt1	90	54.412	ENSPMAG00000001449	trpt1	98	54.412	Petromyzon_marinus
ENSSDUG00000017106	trpt1	91	60.194	ENSPCIG00000008060	TRPT1	83	60.194	Phascolarctos_cinereus
ENSSDUG00000017106	trpt1	92	84.541	ENSPFOG00000009475	trpt1	92	84.541	Poecilia_formosa
ENSSDUG00000017106	trpt1	92	84.541	ENSPMEG00000003682	trpt1	92	84.541	Poecilia_mexicana
ENSSDUG00000017106	trpt1	92	83.575	ENSPREG00000015408	trpt1	92	83.575	Poecilia_reticulata
ENSSDUG00000017106	trpt1	91	59.709	ENSPPYG00000003116	TRPT1	81	59.709	Pongo_abelii
ENSSDUG00000017106	trpt1	96	56.881	ENSPCAG00000000762	TRPT1	81	57.767	Procavia_capensis
ENSSDUG00000017106	trpt1	96	57.991	ENSPCOG00000010370	TRPT1	88	51.500	Propithecus_coquereli
ENSSDUG00000017106	trpt1	92	82.432	ENSPNYG00000014805	trpt1	91	82.432	Pundamilia_nyererei
ENSSDUG00000017106	trpt1	92	70.048	ENSPNAG00000008548	trpt1	91	70.048	Pygocentrus_nattereri
ENSSDUG00000017106	trpt1	97	57.658	ENSRNOG00000023023	Trpt1	83	57.971	Rattus_norvegicus
ENSSDUG00000017106	trpt1	99	56.522	ENSRBIG00000040432	TRPT1	81	57.767	Rhinopithecus_bieti
ENSSDUG00000017106	trpt1	99	57.391	ENSRROG00000044905	TRPT1	81	58.738	Rhinopithecus_roxellana
ENSSDUG00000017106	trpt1	80	35.829	YOL102C	TPT1	80	35.829	Saccharomyces_cerevisiae
ENSSDUG00000017106	trpt1	99	58.442	ENSSBOG00000021466	TRPT1	81	59.420	Saimiri_boliviensis_boliviensis
ENSSDUG00000017106	trpt1	92	67.633	ENSSFOG00015005844	trpt1	92	67.633	Scleropages_formosus
ENSSDUG00000017106	trpt1	92	87.981	ENSSMAG00000017744	trpt1	91	88.406	Scophthalmus_maximus
ENSSDUG00000017106	trpt1	97	98.174	ENSSLDG00000015957	trpt1	91	98.113	Seriola_lalandi_dorsalis
ENSSDUG00000017106	trpt1	77	87.356	ENSSPAG00000007557	trpt1	70	87.861	Stegastes_partitus
ENSSDUG00000017106	trpt1	95	60.369	ENSSSCG00000013040	TRPT1	79	60.386	Sus_scrofa
ENSSDUG00000017106	trpt1	91	80.583	ENSTRUG00000023723	trpt1	89	80.583	Takifugu_rubripes
ENSSDUG00000017106	trpt1	91	83.495	ENSTNIG00000003381	trpt1	89	83.495	Tetraodon_nigroviridis
ENSSDUG00000017106	trpt1	91	55.825	ENSTBEG00000006023	TRPT1	81	55.825	Tupaia_belangeri
ENSSDUG00000017106	trpt1	99	56.277	ENSTTRG00000010252	TRPT1	81	56.796	Tursiops_truncatus
ENSSDUG00000017106	trpt1	96	58.904	ENSUAMG00000015208	TRPT1	81	58.937	Ursus_americanus
ENSSDUG00000017106	trpt1	96	58.904	ENSUMAG00000001410	TRPT1	81	58.937	Ursus_maritimus
ENSSDUG00000017106	trpt1	99	57.391	ENSVVUG00000029774	TRPT1	84	59.420	Vulpes_vulpes
ENSSDUG00000017106	trpt1	99	57.589	ENSXETG00000007196	trpt1	89	60.096	Xenopus_tropicalis
ENSSDUG00000017106	trpt1	92	82.126	ENSXCOG00000001614	trpt1	87	84.974	Xiphophorus_couchianus
ENSSDUG00000017106	trpt1	92	85.990	ENSXMAG00000003142	trpt1	93	85.990	Xiphophorus_maculatus