EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSDUG00000017181 (Gene tree)
Gene ID
111225888
Gene Symbol
rpl13a
Alias
fd05d08|hm:zehp0384|wu:fa95e06|wu:fb08g07|wu:fd05d08
Full Name
ribosomal protein L13a
Gene Type
protein_coding
Species
Seriola_dumerili
Status
putative
Strand
Minus strand
Length
8440 bases
Position
chrBDQW01000149.1:9924895-9933334
Accession
111225888
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSDUP00000023664Ribosomal_L13PF00572.183.5e-1011
ENSSDUP00000023648Ribosomal_L13PF00572.183.7e-1011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSDUT00000024087-1918XM_022750929ENSSDUP00000023648205 (aa)XP_022606650UPI000BBE9515
ENSSDUT00000024105-600-ENSSDUP00000023664199 (aa)--
Gene Model
Click here to download ENSSDUG00000017181's gene model file
Pathways
Pathway IDPathway NameSource
sdu03010RibosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000017181's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSDUG00000017181rpl13a10087.940ENSG00000142541RPL13A9887.940Homo_sapiens
ENSSDUG00000017181rpl13a10098.537ENSAPOG00000014084rpl13a10098.537Acanthochromis_polyacanthus
ENSSDUG00000017181rpl13a10087.940ENSAMEG00000014027RPL13A9987.500Ailuropoda_melanoleuca
ENSSDUG00000017181rpl13a10093.467ENSACIG00000004871rpl13a10093.467Amphilophus_citrinellus
ENSSDUG00000017181rpl13a10098.049ENSAOCG00000002123rpl13a10098.049Amphiprion_ocellaris
ENSSDUG00000017181rpl13a10098.049ENSAPEG00000018777rpl13a10098.049Amphiprion_percula
ENSSDUG00000017181rpl13a10097.073ENSATEG00000012828rpl13a10097.073Anabas_testudineus
ENSSDUG00000017181rpl13a9990.909ENSACAG00000017279RPL13A9890.955Anolis_carolinensis
ENSSDUG00000017181rpl13a10087.940ENSANAG00000030530RPL13A9887.940Aotus_nancymaae
ENSSDUG00000017181rpl13a7184.507ENSANAG00000013769-10084.507Aotus_nancymaae
ENSSDUG00000017181rpl13a10075.500ENSANAG00000020868-9875.500Aotus_nancymaae
ENSSDUG00000017181rpl13a9974.112ENSANAG00000021423-9873.367Aotus_nancymaae
ENSSDUG00000017181rpl13a7170.946ENSANAG00000037443-10070.946Aotus_nancymaae
ENSSDUG00000017181rpl13a10094.634ENSACLG00000016552rpl13a10094.634Astatotilapia_calliptera
ENSSDUG00000017181rpl13a10093.171ENSAMXG00000033532rpl13a10093.171Astyanax_mexicanus
ENSSDUG00000017181rpl13a10087.437ENSBTAG00000005296RPL13A9987.000Bos_taurus
ENSSDUG00000017181rpl13a9853.846WBGene00004428rpl-169753.807Caenorhabditis_elegans
ENSSDUG00000017181rpl13a8375.000ENSCJAG00000008837-9875.000Callithrix_jacchus
ENSSDUG00000017181rpl13a10087.940ENSCJAG00000000072-9887.940Callithrix_jacchus
ENSSDUG00000017181rpl13a10086.432ENSCJAG00000040678-9886.432Callithrix_jacchus
ENSSDUG00000017181rpl13a10081.910ENSCJAG00000046649-9881.910Callithrix_jacchus
ENSSDUG00000017181rpl13a10055.779ENSCAFG00000003946-9755.779Canis_familiaris
ENSSDUG00000017181rpl13a10087.940ENSCAFG00000029892RPL13A9987.500Canis_familiaris
ENSSDUG00000017181rpl13a10087.940ENSCAFG00020024917-9987.500Canis_lupus_dingo
ENSSDUG00000017181rpl13a10087.437ENSCHIG00000021732-9987.879Capra_hircus
ENSSDUG00000017181rpl13a10083.417ENSCHIG00000012581-9883.417Capra_hircus
ENSSDUG00000017181rpl13a10087.940ENSTSYG00000008791-9987.500Carlito_syrichta
ENSSDUG00000017181rpl13a8771.098ENSTSYG00000028115-9668.342Carlito_syrichta
ENSSDUG00000017181rpl13a10088.442ENSCAPG00000007267RPL13A10088.442Cavia_aperea
ENSSDUG00000017181rpl13a10087.940ENSCPOG00000012417RPL13A9987.500Cavia_porcellus
ENSSDUG00000017181rpl13a6393.600ENSCPOG00000023083-5990.226Cavia_porcellus
ENSSDUG00000017181rpl13a9684.293ENSCCAG00000034479-9982.412Cebus_capucinus
ENSSDUG00000017181rpl13a10087.940ENSCCAG00000022898RPL13A9887.940Cebus_capucinus
ENSSDUG00000017181rpl13a6892.593ENSCCAG00000029220-9392.593Cebus_capucinus
ENSSDUG00000017181rpl13a6885.926ENSCCAG00000020555-9785.926Cebus_capucinus
ENSSDUG00000017181rpl13a10087.940ENSCATG00000011576RPL13A9887.940Cercocebus_atys
ENSSDUG00000017181rpl13a10086.935ENSCLAG00000012323RPL13A9986.500Chinchilla_lanigera
ENSSDUG00000017181rpl13a10086.432ENSCSAG00000019054-9886.432Chlorocebus_sabaeus
ENSSDUG00000017181rpl13a10091.457ENSCPBG00000014922RPL13A9391.919Chrysemys_picta_bellii
ENSSDUG00000017181rpl13a9964.532ENSCING00000014892-9964.532Ciona_intestinalis
ENSSDUG00000017181rpl13a9963.547ENSCSAVG00000000666-9963.547Ciona_savignyi
ENSSDUG00000017181rpl13a10086.935ENSCANG00000000304-9886.935Colobus_angolensis_palliatus
ENSSDUG00000017181rpl13a10087.940ENSCANG00000040885-9887.940Colobus_angolensis_palliatus
ENSSDUG00000017181rpl13a8079.012ENSCANG00000018732-9879.012Colobus_angolensis_palliatus
ENSSDUG00000017181rpl13a10087.437ENSCGRG00001018651-9887.437Cricetulus_griseus_chok1gshd
ENSSDUG00000017181rpl13a10087.437ENSCGRG00000005890-9887.437Cricetulus_griseus_crigri
ENSSDUG00000017181rpl13a10087.940ENSCSEG00000002640rpl13a9787.940Cynoglossus_semilaevis
ENSSDUG00000017181rpl13a10081.951ENSCVAG00000011043rpl13a10081.951Cyprinodon_variegatus
ENSSDUG00000017181rpl13a10093.659ENSDARG00000044093rpl13a10093.659Danio_rerio
ENSSDUG00000017181rpl13a10088.442ENSDNOG00000035370-9988.000Dasypus_novemcinctus
ENSSDUG00000017181rpl13a10087.437ENSDORG00000012194-9887.437Dipodomys_ordii
ENSSDUG00000017181rpl13a9857.949FBgn0037351RpL13A9956.931Drosophila_melanogaster
ENSSDUG00000017181rpl13a10071.357ENSETEG00000017076-9871.357Echinops_telfairi
ENSSDUG00000017181rpl13a10084.422ENSETEG00000005732-9884.422Echinops_telfairi
ENSSDUG00000017181rpl13a10070.732ENSEBUG00000007234rpl13a10070.732Eptatretus_burgeri
ENSSDUG00000017181rpl13a9987.879ENSEASG00005005007RPL13A8687.879Equus_asinus_asinus
ENSSDUG00000017181rpl13a10087.437ENSECAG00000015832RPL13A9987.879Equus_caballus
ENSSDUG00000017181rpl13a7684.768ENSEEUG00000014071RPL13A7484.768Erinaceus_europaeus
ENSSDUG00000017181rpl13a10094.634ENSELUG00000014577rpl13a10094.634Esox_lucius
ENSSDUG00000017181rpl13a10088.442ENSFCAG00000009194RPL13A9888.442Felis_catus
ENSSDUG00000017181rpl13a10087.437ENSFDAG00000016892RPL13A9987.000Fukomys_damarensis
ENSSDUG00000017181rpl13a10096.098ENSFHEG00000004165rpl13a10096.098Fundulus_heteroclitus
ENSSDUG00000017181rpl13a9994.444ENSGMOG00000010791rpl13a9394.444Gadus_morhua
ENSSDUG00000017181rpl13a10097.073ENSGAFG00000007578rpl13a10097.073Gambusia_affinis
ENSSDUG00000017181rpl13a10093.970ENSGACG00000009310rpl13a10094.527Gasterosteus_aculeatus
ENSSDUG00000017181rpl13a9685.938ENSGAGG00000002437RPL13A7485.938Gopherus_agassizii
ENSSDUG00000017181rpl13a10087.940ENSGGOG00000002932RPL13A9887.940Gorilla_gorilla
ENSSDUG00000017181rpl13a6689.394ENSGGOG00000039904-7089.394Gorilla_gorilla
ENSSDUG00000017181rpl13a10086.935ENSGGOG00000023324-9886.935Gorilla_gorilla
ENSSDUG00000017181rpl13a6788.060ENSGGOG00000039250-8287.407Gorilla_gorilla
ENSSDUG00000017181rpl13a10094.634ENSHBUG00000023575rpl13a10094.634Haplochromis_burtoni
ENSSDUG00000017181rpl13a10087.437ENSHGLG00000010070RPL13A10087.437Heterocephalus_glaber_female
ENSSDUG00000017181rpl13a10087.437ENSHGLG00100010359RPL13A9987.000Heterocephalus_glaber_male
ENSSDUG00000017181rpl13a10094.634ENSHCOG00000007902rpl13a10094.634Hippocampus_comes
ENSSDUG00000017181rpl13a10092.462ENSIPUG00000014098rpl13a9492.462Ictalurus_punctatus
ENSSDUG00000017181rpl13a9987.374ENSSTOG00000021558RPL13A9987.374Ictidomys_tridecemlineatus
ENSSDUG00000017181rpl13a10087.940ENSJJAG00000000343-9887.940Jaculus_jaculus
ENSSDUG00000017181rpl13a10095.610ENSKMAG00000009039rpl13a10095.610Kryptolebias_marmoratus
ENSSDUG00000017181rpl13a10097.561ENSLBEG00000005434rpl13a10097.561Labrus_bergylta
ENSSDUG00000017181rpl13a9886.869ENSLACG00000019092RPL13A9786.567Latimeria_chalumnae
ENSSDUG00000017181rpl13a10094.634ENSLOCG00000004388rpl13a10094.634Lepisosteus_oculatus
ENSSDUG00000017181rpl13a10087.437ENSLAFG00000016213RPL13A9887.437Loxodonta_africana
ENSSDUG00000017181rpl13a10087.940ENSMFAG00000001097-9887.940Macaca_fascicularis
ENSSDUG00000017181rpl13a10081.373ENSMFAG00000002765-9881.373Macaca_fascicularis
ENSSDUG00000017181rpl13a10078.392ENSMFAG00000003121-9878.894Macaca_fascicularis
ENSSDUG00000017181rpl13a10087.940ENSMMUG00000007551RPL13A9987.940Macaca_mulatta
ENSSDUG00000017181rpl13a10081.373ENSMMUG00000009018-9881.373Macaca_mulatta
ENSSDUG00000017181rpl13a10087.940ENSMNEG00000034977RPL13A9887.940Macaca_nemestrina
ENSSDUG00000017181rpl13a5794.737ENSMLEG00000038132-9794.737Mandrillus_leucophaeus
ENSSDUG00000017181rpl13a10097.073ENSMAMG00000007425rpl13a8697.073Mastacembelus_armatus
ENSSDUG00000017181rpl13a10094.634ENSMZEG00005004952rpl13a10094.634Maylandia_zebra
ENSSDUG00000017181rpl13a10076.382ENSMAUG00000012558-9876.382Mesocricetus_auratus
ENSSDUG00000017181rpl13a10086.935ENSMAUG00000016402-10086.139Mesocricetus_auratus
ENSSDUG00000017181rpl13a9982.741ENSMAUG00000020351-9782.741Mesocricetus_auratus
ENSSDUG00000017181rpl13a9373.514ENSMICG00000043457-9673.514Microcebus_murinus
ENSSDUG00000017181rpl13a10087.940ENSMICG00000009318-9987.500Microcebus_murinus
ENSSDUG00000017181rpl13a10087.437ENSMOCG00000002774-9887.437Microtus_ochrogaster
ENSSDUG00000017181rpl13a10072.362ENSMOCG00000016427-10071.707Microtus_ochrogaster
ENSSDUG00000017181rpl13a10094.975ENSMMOG00000010248rpl13a9894.975Mola_mola
ENSSDUG00000017181rpl13a10098.537ENSMALG00000012804rpl13a10098.537Monopterus_albus
ENSSDUG00000017181rpl13a10087.437MGP_CAROLIEiJ_G0029698-9887.437Mus_caroli
ENSSDUG00000017181rpl13a10087.437ENSMUSG00000074129Rpl13a9887.437Mus_musculus
ENSSDUG00000017181rpl13a10087.437MGP_PahariEiJ_G0012923-9887.437Mus_pahari
ENSSDUG00000017181rpl13a10084.422MGP_SPRETEiJ_G0017763-9884.422Mus_spretus
ENSSDUG00000017181rpl13a10087.437MGP_SPRETEiJ_G0030796Rpl13a9887.437Mus_spretus
ENSSDUG00000017181rpl13a10087.940ENSMPUG00000002604RPL13A9987.500Mustela_putorius_furo
ENSSDUG00000017181rpl13a10087.437ENSMLUG00000004945RPL13A9986.567Myotis_lucifugus
ENSSDUG00000017181rpl13a10087.940ENSNGAG00000021984-9988.384Nannospalax_galili
ENSSDUG00000017181rpl13a10094.634ENSNBRG00000024166rpl13a10094.634Neolamprologus_brichardi
ENSSDUG00000017181rpl13a10081.407ENSNLEG00000012957-9681.407Nomascus_leucogenys
ENSSDUG00000017181rpl13a9985.279ENSNLEG00000033213-9885.279Nomascus_leucogenys
ENSSDUG00000017181rpl13a10080.198ENSNLEG00000005211RPL13A9880.198Nomascus_leucogenys
ENSSDUG00000017181rpl13a8679.651ENSMEUG00000005199RPL13A9979.651Notamacropus_eugenii
ENSSDUG00000017181rpl13a10082.915ENSOPRG00000001194RPL13A10081.463Ochotona_princeps
ENSSDUG00000017181rpl13a10086.432ENSODEG00000019218-9986.000Octodon_degus
ENSSDUG00000017181rpl13a10086.935ENSODEG00000020468-9986.500Octodon_degus
ENSSDUG00000017181rpl13a10085.930ENSODEG00000020233-9985.500Octodon_degus
ENSSDUG00000017181rpl13a10087.437ENSODEG00000016831-9987.000Octodon_degus
ENSSDUG00000017181rpl13a10094.634ENSONIG00000003560rpl13a10094.634Oreochromis_niloticus
ENSSDUG00000017181rpl13a10089.447ENSOANG00000000828RPL13A9989.000Ornithorhynchus_anatinus
ENSSDUG00000017181rpl13a7779.739ENSOCUG00000026592-9877.848Oryctolagus_cuniculus
ENSSDUG00000017181rpl13a10095.122ENSORLG00000014599rpl13a9095.122Oryzias_latipes
ENSSDUG00000017181rpl13a10095.122ENSORLG00020013090rpl13a9095.122Oryzias_latipes_hni
ENSSDUG00000017181rpl13a10095.122ENSORLG00015011634rpl13a9794.500Oryzias_latipes_hsok
ENSSDUG00000017181rpl13a10095.122ENSOMEG00000010232rpl13a9095.122Oryzias_melastigma
ENSSDUG00000017181rpl13a10081.910ENSOGAG00000026177-9881.910Otolemur_garnettii
ENSSDUG00000017181rpl13a9984.925ENSOGAG00000030280-9884.925Otolemur_garnettii
ENSSDUG00000017181rpl13a10087.437ENSOGAG00000004625-9987.000Otolemur_garnettii
ENSSDUG00000017181rpl13a10086.432ENSOARG00000020159-9986.000Ovis_aries
ENSSDUG00000017181rpl13a9987.879ENSOARG00000013169-9887.500Ovis_aries
ENSSDUG00000017181rpl13a9671.728ENSOARG00000017798-9570.984Ovis_aries
ENSSDUG00000017181rpl13a10083.417ENSPPAG00000019107-9883.417Pan_paniscus
ENSSDUG00000017181rpl13a10087.940ENSPPAG00000037365RPL13A9887.940Pan_paniscus
ENSSDUG00000017181rpl13a6689.394ENSPPAG00000006023-6989.394Pan_paniscus
ENSSDUG00000017181rpl13a10085.930ENSPPAG00000023659-9885.930Pan_paniscus
ENSSDUG00000017181rpl13a10088.442ENSPPRG00000011265RPL13A10086.620Panthera_pardus
ENSSDUG00000017181rpl13a6793.985ENSPTRG00000052284-9193.985Pan_troglodytes
ENSSDUG00000017181rpl13a7185.915ENSPTRG00000042978-10085.915Pan_troglodytes
ENSSDUG00000017181rpl13a10083.417ENSPTRG00000049426-9883.417Pan_troglodytes
ENSSDUG00000017181rpl13a10086.935ENSPTRG00000050666-9886.935Pan_troglodytes
ENSSDUG00000017181rpl13a10087.940ENSPTRG00000011298RPL13A9887.940Pan_troglodytes
ENSSDUG00000017181rpl13a10087.940ENSPANG00000012050RPL13A9987.500Papio_anubis
ENSSDUG00000017181rpl13a10092.195ENSPKIG00000000720rpl13a10092.195Paramormyrops_kingsleyae
ENSSDUG00000017181rpl13a10090.955ENSPSIG00000018234RPL13A10090.955Pelodiscus_sinensis
ENSSDUG00000017181rpl13a10093.970ENSPMGG00000010552rpl13a9693.970Periophthalmus_magnuspinnatus
ENSSDUG00000017181rpl13a10087.437ENSPEMG00000009221-9887.437Peromyscus_maniculatus_bairdii
ENSSDUG00000017181rpl13a10087.317ENSPMAG00000006362rpl13a10087.317Petromyzon_marinus
ENSSDUG00000017181rpl13a8573.373ENSPCIG00000014063-9073.373Phascolarctos_cinereus
ENSSDUG00000017181rpl13a10089.447ENSPCIG00000007340-9989.447Phascolarctos_cinereus
ENSSDUG00000017181rpl13a10097.561ENSPFOG00000013546rpl13a10097.561Poecilia_formosa
ENSSDUG00000017181rpl13a10097.561ENSPLAG00000016066rpl13a10097.561Poecilia_latipinna
ENSSDUG00000017181rpl13a10097.561ENSPMEG00000018384rpl13a10097.561Poecilia_mexicana
ENSSDUG00000017181rpl13a10097.561ENSPREG00000020079rpl13a10097.561Poecilia_reticulata
ENSSDUG00000017181rpl13a10087.940ENSPPYG00000006798-9887.940Pongo_abelii
ENSSDUG00000017181rpl13a10087.940ENSPPYG00000010251-9887.940Pongo_abelii
ENSSDUG00000017181rpl13a10088.442ENSPCAG00000004086RPL13A9988.000Procavia_capensis
ENSSDUG00000017181rpl13a10087.940ENSPCOG00000023898RPL13A9988.442Propithecus_coquereli
ENSSDUG00000017181rpl13a9773.057ENSPCOG00000016293-9373.057Propithecus_coquereli
ENSSDUG00000017181rpl13a10087.437ENSPVAG00000010958RPL13A9987.000Pteropus_vampyrus
ENSSDUG00000017181rpl13a10094.634ENSPNYG00000019779rpl13a10094.634Pundamilia_nyererei
ENSSDUG00000017181rpl13a9993.401ENSPNAG00000026887rpl13a9993.137Pygocentrus_nattereri
ENSSDUG00000017181rpl13a10087.437ENSRNOG00000062298Rpl13a9887.437Rattus_norvegicus
ENSSDUG00000017181rpl13a10086.432ENSRBIG00000044737RPL13A9886.432Rhinopithecus_bieti
ENSSDUG00000017181rpl13a6586.260ENSRROG00000028369-6685.606Rhinopithecus_roxellana
ENSSDUG00000017181rpl13a10081.910ENSRROG00000036041-9881.910Rhinopithecus_roxellana
ENSSDUG00000017181rpl13a10087.940ENSRROG00000042976-9887.940Rhinopithecus_roxellana
ENSSDUG00000017181rpl13a9958.376YIL133CRPL16A9658.376Saccharomyces_cerevisiae
ENSSDUG00000017181rpl13a8660.234YNL069CRPL16B9556.477Saccharomyces_cerevisiae
ENSSDUG00000017181rpl13a10070.833ENSSBOG00000024635-9870.833Saimiri_boliviensis_boliviensis
ENSSDUG00000017181rpl13a10087.437ENSSBOG00000028481RPL13A10087.437Saimiri_boliviensis_boliviensis
ENSSDUG00000017181rpl13a10093.659ENSSFOG00015001972rpl13a10093.659Scleropages_formosus
ENSSDUG00000017181rpl13a100100.000ENSSLDG00000002561rpl13a100100.000Seriola_lalandi_dorsalis
ENSSDUG00000017181rpl13a8360.606ENSSLDG00000007920-9359.016Seriola_lalandi_dorsalis
ENSSDUG00000017181rpl13a5770.690ENSSPUG00000014548RPL13A9270.690Sphenodon_punctatus
ENSSDUG00000017181rpl13a10086.935ENSSSCG00000034448-9886.935Sus_scrofa
ENSSDUG00000017181rpl13a9668.750ENSSSCG00000031204-9273.256Sus_scrofa
ENSSDUG00000017181rpl13a10094.146ENSTRUG00000023611rpl13a10094.146Takifugu_rubripes
ENSSDUG00000017181rpl13a5096.970ENSTNIG00000017285rpl13a10096.970Tetraodon_nigroviridis
ENSSDUG00000017181rpl13a10086.432ENSTTRG00000005485RPL13A9986.000Tursiops_truncatus
ENSSDUG00000017181rpl13a10087.940ENSUAMG00000008438RPL13A9987.500Ursus_americanus
ENSSDUG00000017181rpl13a10087.940ENSUMAG00000002385RPL13A9987.500Ursus_maritimus
ENSSDUG00000017181rpl13a9984.848ENSVPAG00000006564RPL13A10084.848Vicugna_pacos
ENSSDUG00000017181rpl13a10087.940ENSVVUG00000022597RPL13A9987.500Vulpes_vulpes
ENSSDUG00000017181rpl13a10090.955ENSXETG00000014144rpl13a8690.955Xenopus_tropicalis
ENSSDUG00000017181rpl13a10097.561ENSXCOG00000004826rpl13a10097.561Xiphophorus_couchianus
ENSSDUG00000017181rpl13a10097.561ENSXMAG00000027604rpl13a10097.561Xiphophorus_maculatus

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