EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000017285 (Gene tree)
Gene ID: 111232681
Gene Symbol: rnaseh2c
Alias: fc08g11|im:5617510|si:dkey-147f20.5|wu:fc08g11
Full Name: ribonuclease H2 subunit C
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 2687 bases
Position: chrBDQW01000331.1:2613913-2616599
Accession: 111232681
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000023771	RNase_H2_suC	PF08615.11	1.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000024215	-	705	XM_022760306	ENSSDUP00000023771	136 (aa)	XP_022616027	UPI000BBE7006

Gene Model

Click here to download ENSSDUG00000017285's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000017285's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000017285	rnaseh2c	100	91.912	ENSAPOG00000012901	rnaseh2c	99	91.912	Acanthochromis_polyacanthus
ENSSDUG00000017285	rnaseh2c	100	83.824	ENSACIG00000022433	rnaseh2c	100	83.824	Amphilophus_citrinellus
ENSSDUG00000017285	rnaseh2c	100	91.912	ENSAOCG00000016855	rnaseh2c	100	91.912	Amphiprion_ocellaris
ENSSDUG00000017285	rnaseh2c	100	92.647	ENSAPEG00000009850	rnaseh2c	100	92.647	Amphiprion_percula
ENSSDUG00000017285	rnaseh2c	100	90.441	ENSATEG00000014395	rnaseh2c	100	90.441	Anabas_testudineus
ENSSDUG00000017285	rnaseh2c	100	83.824	ENSACLG00000016950	rnaseh2c	100	83.824	Astatotilapia_calliptera
ENSSDUG00000017285	rnaseh2c	99	65.185	ENSAMXG00000001210	rnaseh2c	100	65.185	Astyanax_mexicanus
ENSSDUG00000017285	rnaseh2c	99	51.493	ENSCPBG00000023408	-	96	51.493	Chrysemys_picta_bellii
ENSSDUG00000017285	rnaseh2c	100	83.824	ENSCSEG00000005808	rnaseh2c	99	83.824	Cynoglossus_semilaevis
ENSSDUG00000017285	rnaseh2c	100	81.618	ENSCVAG00000006337	rnaseh2c	100	81.618	Cyprinodon_variegatus
ENSSDUG00000017285	rnaseh2c	100	66.912	ENSDARG00000089637	rnaseh2c	99	66.912	Danio_rerio
ENSSDUG00000017285	rnaseh2c	81	52.586	ENSEBUG00000014939	rnaseh2c	74	52.586	Eptatretus_burgeri
ENSSDUG00000017285	rnaseh2c	99	71.111	ENSELUG00000007345	rnaseh2c	99	71.111	Esox_lucius
ENSSDUG00000017285	rnaseh2c	96	80.769	ENSFHEG00000002419	rnaseh2c	95	80.769	Fundulus_heteroclitus
ENSSDUG00000017285	rnaseh2c	65	77.528	ENSGMOG00000008727	rnaseh2c	99	77.528	Gadus_morhua
ENSSDUG00000017285	rnaseh2c	100	80.882	ENSGAFG00000016755	rnaseh2c	83	80.882	Gambusia_affinis
ENSSDUG00000017285	rnaseh2c	99	54.348	ENSGAGG00000008193	-	96	51.493	Gopherus_agassizii
ENSSDUG00000017285	rnaseh2c	100	85.294	ENSHBUG00000012806	rnaseh2c	100	85.294	Haplochromis_burtoni
ENSSDUG00000017285	rnaseh2c	100	80.882	ENSHCOG00000007177	rnaseh2c	100	80.882	Hippocampus_comes
ENSSDUG00000017285	rnaseh2c	100	64.706	ENSIPUG00000018044	rnaseh2c	100	64.706	Ictalurus_punctatus
ENSSDUG00000017285	rnaseh2c	100	83.088	ENSKMAG00000004184	rnaseh2c	100	83.088	Kryptolebias_marmoratus
ENSSDUG00000017285	rnaseh2c	100	85.401	ENSLBEG00000005742	rnaseh2c	100	85.401	Labrus_bergylta
ENSSDUG00000017285	rnaseh2c	95	58.140	ENSLACG00000010120	-	93	57.576	Latimeria_chalumnae
ENSSDUG00000017285	rnaseh2c	100	86.765	ENSMAMG00000021610	rnaseh2c	100	86.765	Mastacembelus_armatus
ENSSDUG00000017285	rnaseh2c	100	84.559	ENSMZEG00005004796	rnaseh2c	100	84.559	Maylandia_zebra
ENSSDUG00000017285	rnaseh2c	100	88.235	ENSMMOG00000002869	rnaseh2c	100	88.235	Mola_mola
ENSSDUG00000017285	rnaseh2c	100	91.241	ENSMALG00000012198	rnaseh2c	100	91.241	Monopterus_albus
ENSSDUG00000017285	rnaseh2c	100	85.294	ENSNBRG00000001462	rnaseh2c	100	85.294	Neolamprologus_brichardi
ENSSDUG00000017285	rnaseh2c	100	84.559	ENSONIG00000005338	rnaseh2c	99	84.559	Oreochromis_niloticus
ENSSDUG00000017285	rnaseh2c	100	77.941	ENSORLG00000023473	rnaseh2c	100	77.941	Oryzias_latipes
ENSSDUG00000017285	rnaseh2c	100	77.941	ENSORLG00020019053	rnaseh2c	91	77.941	Oryzias_latipes_hni
ENSSDUG00000017285	rnaseh2c	100	78.676	ENSORLG00015017067	rnaseh2c	91	78.676	Oryzias_latipes_hsok
ENSSDUG00000017285	rnaseh2c	100	79.412	ENSOMEG00000018607	rnaseh2c	100	79.412	Oryzias_melastigma
ENSSDUG00000017285	rnaseh2c	100	63.235	ENSPKIG00000019331	rnaseh2c	100	63.235	Paramormyrops_kingsleyae
ENSSDUG00000017285	rnaseh2c	100	77.941	ENSPFOG00000009415	rnaseh2c	100	77.941	Poecilia_formosa
ENSSDUG00000017285	rnaseh2c	100	78.676	ENSPLAG00000023330	rnaseh2c	100	78.676	Poecilia_latipinna
ENSSDUG00000017285	rnaseh2c	100	78.676	ENSPMEG00000003696	rnaseh2c	100	78.676	Poecilia_mexicana
ENSSDUG00000017285	rnaseh2c	100	72.789	ENSPREG00000015384	rnaseh2c	73	72.789	Poecilia_reticulata
ENSSDUG00000017285	rnaseh2c	100	85.294	ENSPNYG00000014766	rnaseh2c	100	85.294	Pundamilia_nyererei
ENSSDUG00000017285	rnaseh2c	99	64.444	ENSPNAG00000019111	rnaseh2c	99	64.444	Pygocentrus_nattereri
ENSSDUG00000017285	rnaseh2c	99	69.630	ENSSFOG00015005760	rnaseh2c	99	69.630	Scleropages_formosus
ENSSDUG00000017285	rnaseh2c	100	90.441	ENSSMAG00000017738	rnaseh2c	100	90.441	Scophthalmus_maximus
ENSSDUG00000017285	rnaseh2c	100	98.529	ENSSLDG00000016030	rnaseh2c	100	98.529	Seriola_lalandi_dorsalis
ENSSDUG00000017285	rnaseh2c	96	50.376	ENSSPUG00000000842	-	89	49.265	Sphenodon_punctatus
ENSSDUG00000017285	rnaseh2c	100	88.235	ENSSPAG00000007536	rnaseh2c	100	88.235	Stegastes_partitus
ENSSDUG00000017285	rnaseh2c	100	80.882	ENSTRUG00000021845	rnaseh2c	100	80.882	Takifugu_rubripes
ENSSDUG00000017285	rnaseh2c	100	83.088	ENSTNIG00000000431	rnaseh2c	100	83.088	Tetraodon_nigroviridis
ENSSDUG00000017285	rnaseh2c	99	50.000	ENSXETG00000032466	-	98	50.000	Xenopus_tropicalis
ENSSDUG00000017285	rnaseh2c	100	79.412	ENSXCOG00000001611	rnaseh2c	100	79.412	Xiphophorus_couchianus
ENSSDUG00000017285	rnaseh2c	100	81.618	ENSXMAG00000003147	rnaseh2c	83	81.618	Xiphophorus_maculatus