EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000017294 (Gene tree)
Gene ID: 111230236
Gene Symbol: xpo6
Alias: Ranbp20|fi24f12|wu:fi24f12
Full Name: exportin 6
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 15789 bases
Position: chrBDQW01000260.1:2107593-2123381
Accession: 111230236
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000023852	Xpo1	PF08389.12	2.9e-22	1	1
ENSSDUP00000023901	Xpo1	PF08389.12	1.6e-21	1	1
ENSSDUP00000023852	IBN_N	PF03810.19	7.6e-07	1	1
ENSSDUP00000023901	IBN_N	PF03810.19	7.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000024296	-	5112	XM_022756901	ENSSDUP00000023852	1152 (aa)	XP_022612622	UPI000BBE4820
ENSSDUT00000024347	-	3366	-	ENSSDUP00000023901	1121 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000017294's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000017294's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000017294	xpo6	99	77.480	ENSG00000169180	XPO6	100	94.118	Homo_sapiens
ENSSDUG00000017294	xpo6	100	97.396	ENSAPOG00000012873	xpo6	100	97.396	Acanthochromis_polyacanthus
ENSSDUG00000017294	xpo6	99	77.212	ENSAMEG00000011014	XPO6	99	77.122	Ailuropoda_melanoleuca
ENSSDUG00000017294	xpo6	99	95.889	ENSACIG00000008055	xpo6	99	95.889	Amphilophus_citrinellus
ENSSDUG00000017294	xpo6	100	97.656	ENSAOCG00000001326	xpo6	100	97.656	Amphiprion_ocellaris
ENSSDUG00000017294	xpo6	100	97.569	ENSAPEG00000016304	xpo6	100	97.569	Amphiprion_percula
ENSSDUG00000017294	xpo6	100	96.267	ENSATEG00000002273	xpo6	100	96.267	Anabas_testudineus
ENSSDUG00000017294	xpo6	99	78.642	ENSAPLG00000007480	XPO6	99	78.642	Anas_platyrhynchos
ENSSDUG00000017294	xpo6	100	68.507	ENSACAG00000016883	XPO6	100	68.248	Anolis_carolinensis
ENSSDUG00000017294	xpo6	99	77.122	ENSANAG00000031761	XPO6	99	77.033	Aotus_nancymaae
ENSSDUG00000017294	xpo6	100	95.573	ENSACLG00000007048	xpo6	100	95.573	Astatotilapia_calliptera
ENSSDUG00000017294	xpo6	100	78.133	ENSAMXG00000032539	xpo6	100	78.133	Astyanax_mexicanus
ENSSDUG00000017294	xpo6	100	76.042	ENSBTAG00000010309	XPO6	99	76.854	Bos_taurus
ENSSDUG00000017294	xpo6	99	77.391	ENSCJAG00000006014	XPO6	99	77.301	Callithrix_jacchus
ENSSDUG00000017294	xpo6	99	77.480	ENSCAFG00000017356	XPO6	99	77.391	Canis_familiaris
ENSSDUG00000017294	xpo6	100	76.562	ENSCAFG00020011808	XPO6	100	76.843	Canis_lupus_dingo
ENSSDUG00000017294	xpo6	100	76.128	ENSCHIG00000022341	XPO6	99	76.944	Capra_hircus
ENSSDUG00000017294	xpo6	99	74.309	ENSTSYG00000012249	XPO6	99	74.219	Carlito_syrichta
ENSSDUG00000017294	xpo6	100	76.215	ENSCPOG00000012824	XPO6	99	77.033	Cavia_porcellus
ENSSDUG00000017294	xpo6	99	77.122	ENSCCAG00000036360	XPO6	99	77.033	Cebus_capucinus
ENSSDUG00000017294	xpo6	99	77.391	ENSCATG00000034030	XPO6	99	77.301	Cercocebus_atys
ENSSDUG00000017294	xpo6	99	77.122	ENSCLAG00000012270	XPO6	99	77.033	Chinchilla_lanigera
ENSSDUG00000017294	xpo6	91	76.513	ENSCHOG00000004369	XPO6	90	76.392	Choloepus_hoffmanni
ENSSDUG00000017294	xpo6	89	76.915	ENSCPBG00000024660	XPO6	99	82.353	Chrysemys_picta_bellii
ENSSDUG00000017294	xpo6	100	44.492	ENSCING00000006884	-	100	44.236	Ciona_intestinalis
ENSSDUG00000017294	xpo6	99	43.990	ENSCSAVG00000000850	-	99	43.846	Ciona_savignyi
ENSSDUG00000017294	xpo6	99	77.212	ENSCANG00000041578	XPO6	99	77.122	Colobus_angolensis_palliatus
ENSSDUG00000017294	xpo6	100	76.302	ENSCGRG00001013173	Xpo6	99	76.944	Cricetulus_griseus_chok1gshd
ENSSDUG00000017294	xpo6	100	94.444	ENSCSEG00000013622	xpo6	100	94.444	Cynoglossus_semilaevis
ENSSDUG00000017294	xpo6	100	93.229	ENSCVAG00000017399	xpo6	100	93.142	Cyprinodon_variegatus
ENSSDUG00000017294	xpo6	98	77.370	ENSDARG00000041217	xpo6	99	77.509	Danio_rerio
ENSSDUG00000017294	xpo6	100	76.389	ENSDNOG00000012449	XPO6	99	77.143	Dasypus_novemcinctus
ENSSDUG00000017294	xpo6	100	75.955	ENSDORG00000000919	Xpo6	99	76.765	Dipodomys_ordii
ENSSDUG00000017294	xpo6	83	76.834	ENSETEG00000018768	XPO6	85	76.834	Echinops_telfairi
ENSSDUG00000017294	xpo6	100	59.413	ENSEBUG00000015560	xpo6	99	60.107	Eptatretus_burgeri
ENSSDUG00000017294	xpo6	100	76.476	ENSEASG00005017296	XPO6	99	77.301	Equus_asinus_asinus
ENSSDUG00000017294	xpo6	100	76.562	ENSECAG00000008601	XPO6	99	77.391	Equus_caballus
ENSSDUG00000017294	xpo6	97	71.087	ENSEEUG00000014587	XPO6	99	70.994	Erinaceus_europaeus
ENSSDUG00000017294	xpo6	100	86.557	ENSELUG00000009159	xpo6	100	86.297	Esox_lucius
ENSSDUG00000017294	xpo6	100	76.649	ENSFCAG00000010309	XPO6	99	77.480	Felis_catus
ENSSDUG00000017294	xpo6	99	77.867	ENSFALG00000004441	XPO6	98	77.411	Ficedula_albicollis
ENSSDUG00000017294	xpo6	99	77.569	ENSFDAG00000012689	XPO6	99	77.301	Fukomys_damarensis
ENSSDUG00000017294	xpo6	100	92.795	ENSFHEG00000021190	xpo6	100	92.708	Fundulus_heteroclitus
ENSSDUG00000017294	xpo6	99	78.463	ENSGALG00000035360	XPO6	100	77.344	Gallus_gallus
ENSSDUG00000017294	xpo6	100	92.708	ENSGAFG00000004044	xpo6	100	92.622	Gambusia_affinis
ENSSDUG00000017294	xpo6	95	78.472	ENSGAGG00000022738	XPO6	100	77.974	Gopherus_agassizii
ENSSDUG00000017294	xpo6	99	77.391	ENSGGOG00000005609	XPO6	99	77.301	Gorilla_gorilla
ENSSDUG00000017294	xpo6	100	95.747	ENSHBUG00000019504	xpo6	100	95.747	Haplochromis_burtoni
ENSSDUG00000017294	xpo6	100	76.736	ENSHGLG00000009679	-	99	77.391	Heterocephalus_glaber_female
ENSSDUG00000017294	xpo6	94	59.282	ENSHGLG00000003865	-	99	59.282	Heterocephalus_glaber_female
ENSSDUG00000017294	xpo6	94	64.151	ENSHGLG00100001081	-	99	64.151	Heterocephalus_glaber_male
ENSSDUG00000017294	xpo6	99	77.659	ENSHGLG00100003673	-	99	77.391	Heterocephalus_glaber_male
ENSSDUG00000017294	xpo6	100	93.403	ENSHCOG00000004987	xpo6	100	93.403	Hippocampus_comes
ENSSDUG00000017294	xpo6	99	77.768	ENSIPUG00000006516	xpo6	100	77.489	Ictalurus_punctatus
ENSSDUG00000017294	xpo6	100	76.042	ENSSTOG00000012161	XPO6	99	76.854	Ictidomys_tridecemlineatus
ENSSDUG00000017294	xpo6	100	75.608	ENSJJAG00000019392	Xpo6	99	76.497	Jaculus_jaculus
ENSSDUG00000017294	xpo6	100	94.271	ENSKMAG00000010403	xpo6	100	94.097	Kryptolebias_marmoratus
ENSSDUG00000017294	xpo6	100	96.181	ENSLBEG00000023039	xpo6	100	96.181	Labrus_bergylta
ENSSDUG00000017294	xpo6	100	75.955	ENSLACG00000017930	XPO6	100	75.955	Latimeria_chalumnae
ENSSDUG00000017294	xpo6	95	83.209	ENSLOCG00000003304	xpo6	100	83.116	Lepisosteus_oculatus
ENSSDUG00000017294	xpo6	99	76.854	ENSLAFG00000011960	XPO6	99	76.765	Loxodonta_africana
ENSSDUG00000017294	xpo6	99	77.391	ENSMFAG00000045067	XPO6	99	77.301	Macaca_fascicularis
ENSSDUG00000017294	xpo6	99	77.391	ENSMMUG00000018623	XPO6	99	77.301	Macaca_mulatta
ENSSDUG00000017294	xpo6	99	77.391	ENSMNEG00000028587	XPO6	99	77.301	Macaca_nemestrina
ENSSDUG00000017294	xpo6	99	77.391	ENSMLEG00000029685	XPO6	99	77.301	Mandrillus_leucophaeus
ENSSDUG00000017294	xpo6	100	95.920	ENSMAMG00000001351	xpo6	100	95.920	Mastacembelus_armatus
ENSSDUG00000017294	xpo6	100	95.660	ENSMZEG00005010620	xpo6	100	95.660	Maylandia_zebra
ENSSDUG00000017294	xpo6	98	77.717	ENSMGAG00000009566	XPO6	100	77.536	Meleagris_gallopavo
ENSSDUG00000017294	xpo6	99	68.449	ENSMAUG00000012539	Xpo6	100	67.188	Mesocricetus_auratus
ENSSDUG00000017294	xpo6	100	76.476	ENSMICG00000001923	XPO6	99	77.301	Microcebus_murinus
ENSSDUG00000017294	xpo6	100	76.302	ENSMOCG00000008015	Xpo6	99	76.944	Microtus_ochrogaster
ENSSDUG00000017294	xpo6	99	94.539	ENSMMOG00000011992	xpo6	99	94.539	Mola_mola
ENSSDUG00000017294	xpo6	99	78.105	ENSMODG00000015516	XPO6	99	78.105	Monodelphis_domestica
ENSSDUG00000017294	xpo6	99	85.407	ENSMALG00000020612	xpo6	99	86.213	Monopterus_albus
ENSSDUG00000017294	xpo6	100	76.302	MGP_CAROLIEiJ_G0030439	Xpo6	99	76.944	Mus_caroli
ENSSDUG00000017294	xpo6	100	76.302	ENSMUSG00000000131	Xpo6	99	76.944	Mus_musculus
ENSSDUG00000017294	xpo6	100	76.389	MGP_PahariEiJ_G0013649	Xpo6	99	77.033	Mus_pahari
ENSSDUG00000017294	xpo6	100	76.128	MGP_SPRETEiJ_G0031553	Xpo6	99	76.765	Mus_spretus
ENSSDUG00000017294	xpo6	99	76.944	ENSMPUG00000012920	XPO6	97	76.854	Mustela_putorius_furo
ENSSDUG00000017294	xpo6	99	76.676	ENSMLUG00000012970	XPO6	99	76.586	Myotis_lucifugus
ENSSDUG00000017294	xpo6	99	77.212	ENSNGAG00000012740	Xpo6	99	76.944	Nannospalax_galili
ENSSDUG00000017294	xpo6	100	95.747	ENSNBRG00000007275	xpo6	100	95.747	Neolamprologus_brichardi
ENSSDUG00000017294	xpo6	99	77.480	ENSNLEG00000011518	XPO6	99	77.391	Nomascus_leucogenys
ENSSDUG00000017294	xpo6	87	76.029	ENSOPRG00000009278	XPO6	87	74.760	Ochotona_princeps
ENSSDUG00000017294	xpo6	100	76.562	ENSODEG00000012917	XPO6	100	76.104	Octodon_degus
ENSSDUG00000017294	xpo6	100	95.573	ENSONIG00000019366	xpo6	100	95.573	Oreochromis_niloticus
ENSSDUG00000017294	xpo6	99	77.301	ENSOCUG00000002727	XPO6	99	77.212	Oryctolagus_cuniculus
ENSSDUG00000017294	xpo6	100	91.587	ENSORLG00000011231	xpo6	100	91.414	Oryzias_latipes
ENSSDUG00000017294	xpo6	100	92.021	ENSORLG00020000386	xpo6	100	91.847	Oryzias_latipes_hni
ENSSDUG00000017294	xpo6	100	91.761	ENSORLG00015003636	xpo6	100	91.587	Oryzias_latipes_hsok
ENSSDUG00000017294	xpo6	100	92.368	ENSOMEG00000016505	xpo6	100	92.194	Oryzias_melastigma
ENSSDUG00000017294	xpo6	99	77.480	ENSOGAG00000012844	XPO6	99	77.391	Otolemur_garnettii
ENSSDUG00000017294	xpo6	99	76.944	ENSOARG00000000960	XPO6	99	76.854	Ovis_aries
ENSSDUG00000017294	xpo6	99	77.391	ENSPPAG00000033668	XPO6	99	77.301	Pan_paniscus
ENSSDUG00000017294	xpo6	99	77.370	ENSPPRG00000001454	XPO6	100	77.281	Panthera_pardus
ENSSDUG00000017294	xpo6	97	76.611	ENSPTIG00000016663	XPO6	99	76.519	Panthera_tigris_altaica
ENSSDUG00000017294	xpo6	99	77.391	ENSPTRG00000007919	XPO6	99	77.301	Pan_troglodytes
ENSSDUG00000017294	xpo6	99	77.391	ENSPANG00000017103	XPO6	99	77.301	Papio_anubis
ENSSDUG00000017294	xpo6	99	82.543	ENSPKIG00000022550	xpo6	100	82.109	Paramormyrops_kingsleyae
ENSSDUG00000017294	xpo6	99	77.480	ENSPSIG00000018225	XPO6	100	77.005	Pelodiscus_sinensis
ENSSDUG00000017294	xpo6	99	92.844	ENSPMGG00000014436	xpo6	100	92.844	Periophthalmus_magnuspinnatus
ENSSDUG00000017294	xpo6	100	76.302	ENSPEMG00000012100	Xpo6	99	76.944	Peromyscus_maniculatus_bairdii
ENSSDUG00000017294	xpo6	99	68.673	ENSPMAG00000003127	xpo6	99	68.733	Petromyzon_marinus
ENSSDUG00000017294	xpo6	97	77.624	ENSPCIG00000003863	XPO6	100	77.425	Phascolarctos_cinereus
ENSSDUG00000017294	xpo6	100	93.235	ENSPFOG00000008763	xpo6	100	93.148	Poecilia_formosa
ENSSDUG00000017294	xpo6	100	93.229	ENSPLAG00000014054	xpo6	100	93.142	Poecilia_latipinna
ENSSDUG00000017294	xpo6	100	93.316	ENSPMEG00000018994	xpo6	100	93.229	Poecilia_mexicana
ENSSDUG00000017294	xpo6	97	93.488	ENSPREG00000016421	xpo6	96	93.399	Poecilia_reticulata
ENSSDUG00000017294	xpo6	99	77.391	ENSPPYG00000007218	XPO6	99	77.301	Pongo_abelii
ENSSDUG00000017294	xpo6	90	78.198	ENSPCAG00000008918	XPO6	90	78.198	Procavia_capensis
ENSSDUG00000017294	xpo6	100	76.562	ENSPCOG00000017886	XPO6	99	77.391	Propithecus_coquereli
ENSSDUG00000017294	xpo6	80	91.304	ENSPVAG00000012234	XPO6	80	91.304	Pteropus_vampyrus
ENSSDUG00000017294	xpo6	100	95.660	ENSPNYG00000008375	xpo6	100	95.660	Pundamilia_nyererei
ENSSDUG00000017294	xpo6	100	77.720	ENSPNAG00000008284	xpo6	100	77.720	Pygocentrus_nattereri
ENSSDUG00000017294	xpo6	100	76.042	ENSRNOG00000016722	Xpo6	99	76.765	Rattus_norvegicus
ENSSDUG00000017294	xpo6	99	77.391	ENSRBIG00000031469	XPO6	99	77.301	Rhinopithecus_bieti
ENSSDUG00000017294	xpo6	99	77.301	ENSRROG00000044864	XPO6	99	77.212	Rhinopithecus_roxellana
ENSSDUG00000017294	xpo6	99	77.122	ENSSBOG00000027650	XPO6	99	77.033	Saimiri_boliviensis_boliviensis
ENSSDUG00000017294	xpo6	99	77.927	ENSSHAG00000013864	XPO6	99	77.927	Sarcophilus_harrisii
ENSSDUG00000017294	xpo6	100	78.819	ENSSFOG00015009347	xpo6	100	78.733	Scleropages_formosus
ENSSDUG00000017294	xpo6	100	96.615	ENSSMAG00000010566	xpo6	100	96.615	Scophthalmus_maximus
ENSSDUG00000017294	xpo6	100	99.643	ENSSLDG00000006580	xpo6	100	99.643	Seriola_lalandi_dorsalis
ENSSDUG00000017294	xpo6	93	76.816	ENSSARG00000013120	XPO6	92	76.536	Sorex_araneus
ENSSDUG00000017294	xpo6	100	77.431	ENSSPUG00000009217	XPO6	100	77.410	Sphenodon_punctatus
ENSSDUG00000017294	xpo6	100	97.743	ENSSPAG00000009469	xpo6	100	97.743	Stegastes_partitus
ENSSDUG00000017294	xpo6	100	76.562	ENSSSCG00000007812	XPO6	99	77.391	Sus_scrofa
ENSSDUG00000017294	xpo6	87	78.345	ENSTGUG00000003781	XPO6	99	78.243	Taeniopygia_guttata
ENSSDUG00000017294	xpo6	100	93.403	ENSTRUG00000004696	xpo6	100	93.142	Takifugu_rubripes
ENSSDUG00000017294	xpo6	99	93.397	ENSTNIG00000018949	xpo6	99	93.397	Tetraodon_nigroviridis
ENSSDUG00000017294	xpo6	93	90.370	ENSTBEG00000009945	XPO6	93	90.370	Tupaia_belangeri
ENSSDUG00000017294	xpo6	99	77.033	ENSTTRG00000009558	XPO6	99	76.944	Tursiops_truncatus
ENSSDUG00000017294	xpo6	99	75.782	ENSUMAG00000007086	XPO6	99	75.693	Ursus_maritimus
ENSSDUG00000017294	xpo6	91	91.176	ENSVPAG00000008493	XPO6	94	91.176	Vicugna_pacos
ENSSDUG00000017294	xpo6	100	76.562	ENSVVUG00000024150	XPO6	99	77.391	Vulpes_vulpes
ENSSDUG00000017294	xpo6	99	73.060	ENSXETG00000010326	xpo6	99	73.060	Xenopus_tropicalis
ENSSDUG00000017294	xpo6	100	93.490	ENSXMAG00000011630	xpo6	100	93.403	Xiphophorus_maculatus