EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSDUG00000017298 (Gene tree)
Gene ID
-
Gene Symbol
smarca4a
Alias
brahma-related gene 1|brg1|smarca2|smarca4|wu:fb51a08|yng|young
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4a
Gene Type
protein_coding
Species
Seriola_dumerili
Status
putative
Strand
Plus strand
Length
11757 bases
Position
chrBDQW01001191.1:499890-511646
Accession
ZDB-GENE-030605-1
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSDUP00000023858ResIIIPF04851.155.2e-0911
ENSSDUP00000023858BRKPF07533.165.9e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSDUT00000024301-4713-ENSSDUP000000238581570 (aa)--
Gene Model
Click here to download ENSSDUG00000017298's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000017298's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSDUG00000017298smarca4a9983.024ENSSDUG00000005388-9583.220
ENSSDUG00000017298smarca4a9967.315ENSSDUG00000008852-9467.713
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSDUG00000017298smarca4a10083.926ENSG00000127616SMARCA497100.000Homo_sapiens
ENSSDUG00000017298smarca4a9579.627ENSAPOG00000004542SMARCA49981.623Acanthochromis_polyacanthus
ENSSDUG00000017298smarca4a7788.587ENSAPOG00000003509smarca4a9885.973Acanthochromis_polyacanthus
ENSSDUG00000017298smarca4a10079.693ENSAMEG00000010868SMARCA410079.598Ailuropoda_melanoleuca
ENSSDUG00000017298smarca4a9991.528ENSACIG00000021550smarca4a9891.095Amphilophus_citrinellus
ENSSDUG00000017298smarca4a9582.026ENSACIG00000003035-9782.507Amphilophus_citrinellus
ENSSDUG00000017298smarca4a8989.488ENSAOCG00000019167smarca4a10089.557Amphiprion_ocellaris
ENSSDUG00000017298smarca4a9483.267ENSAOCG00000009450-9784.003Amphiprion_ocellaris
ENSSDUG00000017298smarca4a10079.292ENSAPEG00000023108-9979.246Amphiprion_percula
ENSSDUG00000017298smarca4a8989.365ENSAPEG00000015559smarca4a10089.434Amphiprion_percula
ENSSDUG00000017298smarca4a9980.692ENSATEG00000001094-9679.623Anabas_testudineus
ENSSDUG00000017298smarca4a10090.904ENSATEG00000011524smarca4a10091.148Anabas_testudineus
ENSSDUG00000017298smarca4a9983.561ENSANAG00000036991SMARCA410080.964Aotus_nancymaae
ENSSDUG00000017298smarca4a9579.662ENSACLG00000008638-9881.027Astatotilapia_calliptera
ENSSDUG00000017298smarca4a9992.574ENSACLG00000000163smarca4a9892.511Astatotilapia_calliptera
ENSSDUG00000017298smarca4a9883.090ENSAMXG00000021023smarca4a9883.344Astyanax_mexicanus
ENSSDUG00000017298smarca4a9483.290ENSAMXG00000011238-9483.412Astyanax_mexicanus
ENSSDUG00000017298smarca4a10084.412ENSBTAG00000019220SMARCA49883.881Bos_taurus
ENSSDUG00000017298smarca4a10079.953ENSCJAG00000005936SMARCA410079.976Callithrix_jacchus
ENSSDUG00000017298smarca4a10083.752ENSCAFG00000017584SMARCA410083.661Canis_familiaris
ENSSDUG00000017298smarca4a10083.752ENSCAFG00020024620SMARCA49983.661Canis_lupus_dingo
ENSSDUG00000017298smarca4a10080.999ENSCHIG00000015318SMARCA49880.380Capra_hircus
ENSSDUG00000017298smarca4a10084.188ENSTSYG00000012966SMARCA410083.951Carlito_syrichta
ENSSDUG00000017298smarca4a9478.197ENSCAPG00000015932SMARCA49584.668Cavia_aperea
ENSSDUG00000017298smarca4a10083.814ENSCPOG00000015549SMARCA410083.600Cavia_porcellus
ENSSDUG00000017298smarca4a10080.537ENSCCAG00000031660SMARCA49981.063Cebus_capucinus
ENSSDUG00000017298smarca4a10083.875ENSCATG00000029530SMARCA410083.722Cercocebus_atys
ENSSDUG00000017298smarca4a10084.022ENSCLAG00000011946SMARCA410084.064Chinchilla_lanigera
ENSSDUG00000017298smarca4a10083.661ENSCPBG00000009994SMARCA410083.692Chrysemys_picta_bellii
ENSSDUG00000017298smarca4a10083.814ENSCANG00000036013SMARCA410083.722Colobus_angolensis_palliatus
ENSSDUG00000017298smarca4a10083.630ENSCGRG00001016732Smarca410083.415Cricetulus_griseus_chok1gshd
ENSSDUG00000017298smarca4a10083.630ENSCGRG00000017242Smarca410083.415Cricetulus_griseus_crigri
ENSSDUG00000017298smarca4a9688.559ENSCSEG00000014771smarca4a10089.756Cynoglossus_semilaevis
ENSSDUG00000017298smarca4a9988.326ENSCVAG00000006979smarca4a9989.006Cyprinodon_variegatus
ENSSDUG00000017298smarca4a9981.516ENSCVAG00000003018-9881.778Cyprinodon_variegatus
ENSSDUG00000017298smarca4a9280.319ENSDARG00000104339SMARCA49480.147Danio_rerio
ENSSDUG00000017298smarca4a10085.610ENSDARG00000077226smarca4a10084.906Danio_rerio
ENSSDUG00000017298smarca4a10075.721ENSDNOG00000048847SMARCA49875.415Dasypus_novemcinctus
ENSSDUG00000017298smarca4a8477.988ENSDORG00000002544Smarca49575.157Dipodomys_ordii
ENSSDUG00000017298smarca4a9473.539ENSETEG00000013361SMARCA49472.716Echinops_telfairi
ENSSDUG00000017298smarca4a10083.691ENSEASG00005006167SMARCA410082.724Equus_asinus_asinus
ENSSDUG00000017298smarca4a10083.752ENSECAG00000008334SMARCA410083.600Equus_caballus
ENSSDUG00000017298smarca4a10086.155ENSELUG00000010247smarca4a10085.463Esox_lucius
ENSSDUG00000017298smarca4a9975.614ENSELUG00000023232-9476.128Esox_lucius
ENSSDUG00000017298smarca4a10083.599ENSFCAG00000004894SMARCA410083.446Felis_catus
ENSSDUG00000017298smarca4a9180.991ENSFALG00000004208SMARCA49281.806Ficedula_albicollis
ENSSDUG00000017298smarca4a9183.534ENSFDAG00000012237SMARCA49783.378Fukomys_damarensis
ENSSDUG00000017298smarca4a10081.083ENSFHEG00000007902-9881.767Fundulus_heteroclitus
ENSSDUG00000017298smarca4a9687.046ENSFHEG00000010182smarca4a10087.857Fundulus_heteroclitus
ENSSDUG00000017298smarca4a9290.798ENSGMOG00000002649smarca4a9391.369Gadus_morhua
ENSSDUG00000017298smarca4a9075.383ENSGMOG00000005756-9074.510Gadus_morhua
ENSSDUG00000017298smarca4a7283.038ENSGALG00000047145SMARCA49983.080Gallus_gallus
ENSSDUG00000017298smarca4a9978.558ENSGAFG00000008827-9878.984Gambusia_affinis
ENSSDUG00000017298smarca4a9088.332ENSGAFG00000014900smarca4a9889.795Gambusia_affinis
ENSSDUG00000017298smarca4a9976.446ENSGACG00000016033-9576.235Gasterosteus_aculeatus
ENSSDUG00000017298smarca4a9888.488ENSGACG00000006691smarca4a9888.584Gasterosteus_aculeatus
ENSSDUG00000017298smarca4a10083.877ENSGAGG00000016757SMARCA410083.909Gopherus_agassizii
ENSSDUG00000017298smarca4a10083.875ENSGGOG00000009882SMARCA410083.722Gorilla_gorilla
ENSSDUG00000017298smarca4a9992.758ENSHBUG00000021172smarca4a10091.448Haplochromis_burtoni
ENSSDUG00000017298smarca4a10079.154ENSHBUG00000005447-9881.546Haplochromis_burtoni
ENSSDUG00000017298smarca4a10083.272ENSHGLG00000010519SMARCA410083.058Heterocephalus_glaber_female
ENSSDUG00000017298smarca4a10083.221ENSHGLG00100013774SMARCA410082.699Heterocephalus_glaber_male
ENSSDUG00000017298smarca4a9589.724ENSHCOG00000009510smarca4a9689.801Hippocampus_comes
ENSSDUG00000017298smarca4a9881.681ENSIPUG00000016346-9781.639Ictalurus_punctatus
ENSSDUG00000017298smarca4a10085.350ENSIPUG00000006107smarca4a10084.061Ictalurus_punctatus
ENSSDUG00000017298smarca4a10083.691ENSSTOG00000007939SMARCA410083.538Ictidomys_tridecemlineatus
ENSSDUG00000017298smarca4a10082.081ENSJJAG00000012877Smarca410081.337Jaculus_jaculus
ENSSDUG00000017298smarca4a9990.290ENSKMAG00000011931smarca4a10089.209Kryptolebias_marmoratus
ENSSDUG00000017298smarca4a9584.255ENSKMAG00000019518-9884.255Kryptolebias_marmoratus
ENSSDUG00000017298smarca4a9588.166ENSLBEG00000017383smarca4a9787.702Labrus_bergylta
ENSSDUG00000017298smarca4a9968.996ENSLBEG00000020655-9869.427Labrus_bergylta
ENSSDUG00000017298smarca4a5283.333ENSLACG00000015309SMARCA410083.816Latimeria_chalumnae
ENSSDUG00000017298smarca4a10083.447ENSLOCG00000007820smarca4a9983.323Lepisosteus_oculatus
ENSSDUG00000017298smarca4a10083.660ENSLAFG00000001433SMARCA410083.507Loxodonta_africana
ENSSDUG00000017298smarca4a10083.875ENSMFAG00000032146SMARCA49983.722Macaca_fascicularis
ENSSDUG00000017298smarca4a10083.875ENSMMUG00000012042SMARCA410083.722Macaca_mulatta
ENSSDUG00000017298smarca4a10083.855ENSMNEG00000028512SMARCA410083.702Macaca_nemestrina
ENSSDUG00000017298smarca4a10083.875ENSMLEG00000034976SMARCA410083.568Mandrillus_leucophaeus
ENSSDUG00000017298smarca4a10091.209ENSMAMG00000009256smarca4a10090.049Mastacembelus_armatus
ENSSDUG00000017298smarca4a9583.867ENSMAMG00000002841-9884.224Mastacembelus_armatus
ENSSDUG00000017298smarca4a9483.454ENSMZEG00005023861-9880.528Maylandia_zebra
ENSSDUG00000017298smarca4a9992.637ENSMZEG00005003889smarca4a10091.331Maylandia_zebra
ENSSDUG00000017298smarca4a10083.354ENSMAUG00000020731Smarca410083.139Mesocricetus_auratus
ENSSDUG00000017298smarca4a10083.660ENSMICG00000009806SMARCA410083.507Microcebus_murinus
ENSSDUG00000017298smarca4a10083.476ENSMOCG00000022209Smarca410083.262Microtus_ochrogaster
ENSSDUG00000017298smarca4a9589.637ENSMMOG00000007571smarca4a9888.422Mola_mola
ENSSDUG00000017298smarca4a9979.086ENSMMOG00000008466-9878.944Mola_mola
ENSSDUG00000017298smarca4a10082.700ENSMODG00000006287SMARCA410082.186Monodelphis_domestica
ENSSDUG00000017298smarca4a9591.932ENSMALG00000003388smarca4a10091.265Monopterus_albus
ENSSDUG00000017298smarca4a8980.319ENSMALG00000021534-9680.447Monopterus_albus
ENSSDUG00000017298smarca4a10083.742MGP_CAROLIEiJ_G0031879Smarca410083.528Mus_caroli
ENSSDUG00000017298smarca4a10083.742ENSMUSG00000032187Smarca410083.528Mus_musculus
ENSSDUG00000017298smarca4a10084.175MGP_PahariEiJ_G0014745Smarca410083.899Mus_pahari
ENSSDUG00000017298smarca4a10083.742MGP_SPRETEiJ_G0033003Smarca410083.528Mus_spretus
ENSSDUG00000017298smarca4a10083.814ENSMPUG00000005711SMARCA410083.661Mustela_putorius_furo
ENSSDUG00000017298smarca4a10084.120ENSMLUG00000004491-10083.722Myotis_lucifugus
ENSSDUG00000017298smarca4a10084.175ENSNGAG00000021852Smarca410083.621Nannospalax_galili
ENSSDUG00000017298smarca4a8980.663ENSNBRG00000018865-9981.120Neolamprologus_brichardi
ENSSDUG00000017298smarca4a9588.679ENSNBRG00000011457smarca4a9689.279Neolamprologus_brichardi
ENSSDUG00000017298smarca4a10078.466ENSNLEG00000012389SMARCA49481.307Nomascus_leucogenys
ENSSDUG00000017298smarca4a7696.552ENSOPRG00000000885-7496.552Ochotona_princeps
ENSSDUG00000017298smarca4a10081.624ENSODEG00000017127SMARCA410080.944Octodon_degus
ENSSDUG00000017298smarca4a10079.333ENSONIG00000018040-9980.376Oreochromis_niloticus
ENSSDUG00000017298smarca4a10092.937ENSONIG00000008196smarca4a10092.875Oreochromis_niloticus
ENSSDUG00000017298smarca4a9778.178ENSOCUG00000001787SMARCA49877.996Oryctolagus_cuniculus
ENSSDUG00000017298smarca4a10088.671ENSORLG00000015452smarca4a10088.657Oryzias_latipes
ENSSDUG00000017298smarca4a9578.871ENSORLG00000003955-9979.585Oryzias_latipes
ENSSDUG00000017298smarca4a10088.304ENSORLG00020004611smarca4a10088.657Oryzias_latipes_hni
ENSSDUG00000017298smarca4a9578.822ENSORLG00020009728-9979.535Oryzias_latipes_hni
ENSSDUG00000017298smarca4a9978.874ENSORLG00015007739-9579.523Oryzias_latipes_hsok
ENSSDUG00000017298smarca4a10088.365ENSORLG00015016560smarca4a9892.567Oryzias_latipes_hsok
ENSSDUG00000017298smarca4a10089.148ENSOMEG00000007486smarca4a10089.441Oryzias_melastigma
ENSSDUG00000017298smarca4a9679.654ENSOMEG00000016626-9579.473Oryzias_melastigma
ENSSDUG00000017298smarca4a8982.204ENSOGAG00000016148SMARCA410081.756Otolemur_garnettii
ENSSDUG00000017298smarca4a10083.805ENSOARG00000017454SMARCA49883.944Ovis_aries
ENSSDUG00000017298smarca4a10083.875ENSPPAG00000043191SMARCA410083.722Pan_paniscus
ENSSDUG00000017298smarca4a10083.599ENSPPRG00000000064SMARCA410083.446Panthera_pardus
ENSSDUG00000017298smarca4a8081.077ENSPTIG00000017447SMARCA410078.227Panthera_tigris_altaica
ENSSDUG00000017298smarca4a10083.875ENSPTRG00000010488SMARCA410083.722Pan_troglodytes
ENSSDUG00000017298smarca4a10083.978ENSPANG00000011042SMARCA410082.930Papio_anubis
ENSSDUG00000017298smarca4a10082.425ENSPKIG00000010087-9882.445Paramormyrops_kingsleyae
ENSSDUG00000017298smarca4a10085.158ENSPKIG00000007770SMARCA410085.497Paramormyrops_kingsleyae
ENSSDUG00000017298smarca4a10078.507ENSPSIG00000005547SMARCA410078.282Pelodiscus_sinensis
ENSSDUG00000017298smarca4a10083.537ENSPEMG00000020389Smarca410083.323Peromyscus_maniculatus_bairdii
ENSSDUG00000017298smarca4a10084.266ENSPCIG00000017138SMARCA410084.298Phascolarctos_cinereus
ENSSDUG00000017298smarca4a10086.224ENSPFOG00000007892smarca4a10088.092Poecilia_formosa
ENSSDUG00000017298smarca4a10079.405ENSPFOG00000012930-9979.929Poecilia_formosa
ENSSDUG00000017298smarca4a10086.224ENSPLAG00000014294smarca4a10088.092Poecilia_latipinna
ENSSDUG00000017298smarca4a9983.124ENSPLAG00000018616-9883.386Poecilia_latipinna
ENSSDUG00000017298smarca4a9983.584ENSPMEG00000003725smarca4a9788.115Poecilia_mexicana
ENSSDUG00000017298smarca4a9581.423ENSPMEG00000008929-9881.950Poecilia_mexicana
ENSSDUG00000017298smarca4a9977.427ENSPREG00000014823-9780.100Poecilia_reticulata
ENSSDUG00000017298smarca4a10086.325ENSPREG00000014608smarca4a10087.583Poecilia_reticulata
ENSSDUG00000017298smarca4a10081.911ENSPPYG00000009568SMARCA410081.818Pongo_abelii
ENSSDUG00000017298smarca4a7986.667ENSPCAG00000014054SMARCA47591.406Procavia_capensis
ENSSDUG00000017298smarca4a10083.752ENSPCOG00000023011SMARCA410083.446Propithecus_coquereli
ENSSDUG00000017298smarca4a9385.047ENSPVAG00000007787SMARCA49284.962Pteropus_vampyrus
ENSSDUG00000017298smarca4a9989.301ENSPNYG00000000717smarca4a9691.265Pundamilia_nyererei
ENSSDUG00000017298smarca4a9581.438ENSPNYG00000023995-9882.050Pundamilia_nyererei
ENSSDUG00000017298smarca4a9583.109ENSPNAG00000006636-9383.178Pygocentrus_nattereri
ENSSDUG00000017298smarca4a9780.696ENSPNAG00000024136smarca4a9782.413Pygocentrus_nattereri
ENSSDUG00000017298smarca4a10083.742ENSRNOG00000009271Smarca410083.528Rattus_norvegicus
ENSSDUG00000017298smarca4a10083.814ENSRBIG00000038696SMARCA49983.661Rhinopithecus_bieti
ENSSDUG00000017298smarca4a10083.814ENSRROG00000045509SMARCA410083.661Rhinopithecus_roxellana
ENSSDUG00000017298smarca4a10083.620ENSSBOG00000026896SMARCA49883.651Saimiri_boliviensis_boliviensis
ENSSDUG00000017298smarca4a10084.388ENSSHAG00000001642SMARCA410084.421Sarcophilus_harrisii
ENSSDUG00000017298smarca4a9581.579ENSSFOG00015009921-9780.520Scleropages_formosus
ENSSDUG00000017298smarca4a10085.957ENSSFOG00015013823smarca410085.993Scleropages_formosus
ENSSDUG00000017298smarca4a9991.682ENSSMAG00000003200smarca4a10089.903Scophthalmus_maximus
ENSSDUG00000017298smarca4a10077.473ENSSMAG00000014082-9977.437Scophthalmus_maximus
ENSSDUG00000017298smarca4a10092.615ENSSLDG00000024486smarca4a10091.889Seriola_lalandi_dorsalis
ENSSDUG00000017298smarca4a9584.094ENSSLDG00000023663-9784.255Seriola_lalandi_dorsalis
ENSSDUG00000017298smarca4a6296.894ENSSARG00000013477SMARCA48196.894Sorex_araneus
ENSSDUG00000017298smarca4a9581.290ENSSPUG00000004558SMARCA49881.214Sphenodon_punctatus
ENSSDUG00000017298smarca4a10091.465ENSSPAG00000004248smarca4a10090.799Stegastes_partitus
ENSSDUG00000017298smarca4a10079.622ENSSPAG00000012533-9979.426Stegastes_partitus
ENSSDUG00000017298smarca4a10084.027ENSSSCG00000013629SMARCA410083.630Sus_scrofa
ENSSDUG00000017298smarca4a5275.822ENSTGUG00000015488-9875.740Taeniopygia_guttata
ENSSDUG00000017298smarca4a9579.164ENSTRUG00000001378SMARCA49878.141Takifugu_rubripes
ENSSDUG00000017298smarca4a8983.664ENSTRUG00000004885smarca4a10083.322Takifugu_rubripes
ENSSDUG00000017298smarca4a7393.238ENSTNIG00000004859-10093.238Tetraodon_nigroviridis
ENSSDUG00000017298smarca4a10078.919ENSTNIG00000004536SMARCA49980.062Tetraodon_nigroviridis
ENSSDUG00000017298smarca4a10081.096ENSTTRG00000009519SMARCA410080.289Tursiops_truncatus
ENSSDUG00000017298smarca4a10083.814ENSUAMG00000014661SMARCA410083.661Ursus_americanus
ENSSDUG00000017298smarca4a9580.809ENSUMAG00000022005SMARCA49885.414Ursus_maritimus
ENSSDUG00000017298smarca4a10083.752ENSVVUG00000017820SMARCA49783.661Vulpes_vulpes
ENSSDUG00000017298smarca4a10079.406ENSXETG00000009355smarca49983.531Xenopus_tropicalis
ENSSDUG00000017298smarca4a9980.515ENSXCOG00000013494-9480.732Xiphophorus_couchianus
ENSSDUG00000017298smarca4a10079.593ENSXMAG00000007030-9881.710Xiphophorus_maculatus
ENSSDUG00000017298smarca4a10086.906ENSXMAG00000006321smarca4a10088.293Xiphophorus_maculatus

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