EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000017519 (Gene tree)
Gene ID: -
Gene Symbol: srrm4
Alias: ZnSR100|im:7136231|si:dkey-1k23.1
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 60153 bases
Position: chrBDQW01000177.1:1019508-1079660
Accession: ZDB-GENE-050208-34
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000024103	SRRM_C	PF15230.6	9.5e-25	1	1
ENSSDUP00000024116	SRRM_C	PF15230.6	8.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000024569	-	951	-	ENSSDUP00000024116	316 (aa)	-	-
ENSSDUT00000024551	-	1341	-	ENSSDUP00000024103	446 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000017519's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000017519's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000017519	srrm4	99	67.890	ENSACIG00000002171	srrm4	94	68.090	Amphilophus_citrinellus
ENSSDUG00000017519	srrm4	99	76.758	ENSATEG00000005330	srrm4	99	74.501	Anabas_testudineus
ENSSDUG00000017519	srrm4	99	71.137	ENSACLG00000023532	srrm4	98	71.274	Astatotilapia_calliptera
ENSSDUG00000017519	srrm4	97	55.660	ENSCSEG00000007689	-	89	52.020	Cynoglossus_semilaevis
ENSSDUG00000017519	srrm4	76	55.200	ENSELUG00000004986	srrm4	68	69.697	Esox_lucius
ENSSDUG00000017519	srrm4	99	67.378	ENSFHEG00000005091	srrm4	92	64.286	Fundulus_heteroclitus
ENSSDUG00000017519	srrm4	77	45.387	ENSGMOG00000006714	srrm4	63	47.093	Gadus_morhua
ENSSDUG00000017519	srrm4	99	61.310	ENSGAFG00000006706	srrm4	99	61.587	Gambusia_affinis
ENSSDUG00000017519	srrm4	99	65.546	ENSHBUG00000010505	srrm4	63	94.737	Haplochromis_burtoni
ENSSDUG00000017519	srrm4	99	71.588	ENSMAMG00000004280	srrm4	99	71.588	Mastacembelus_armatus
ENSSDUG00000017519	srrm4	99	71.137	ENSMZEG00005021733	srrm4	98	71.274	Maylandia_zebra
ENSSDUG00000017519	srrm4	100	66.159	ENSMMOG00000000228	srrm4	99	64.407	Mola_mola
ENSSDUG00000017519	srrm4	78	73.723	ENSMALG00000001422	srrm4	65	72.222	Monopterus_albus
ENSSDUG00000017519	srrm4	99	70.238	ENSNBRG00000015313	srrm4	98	65.469	Neolamprologus_brichardi
ENSSDUG00000017519	srrm4	99	66.189	ENSONIG00000010552	srrm4	63	94.737	Oreochromis_niloticus
ENSSDUG00000017519	srrm4	76	73.239	ENSORLG00020009749	srrm4	93	52.229	Oryzias_latipes_hni
ENSSDUG00000017519	srrm4	98	57.582	ENSPMGG00000008387	srrm4	95	55.604	Periophthalmus_magnuspinnatus
ENSSDUG00000017519	srrm4	99	64.525	ENSPFOG00000014600	srrm4	99	70.718	Poecilia_formosa
ENSSDUG00000017519	srrm4	99	65.875	ENSPLAG00000002006	srrm4	99	68.304	Poecilia_latipinna
ENSSDUG00000017519	srrm4	77	61.265	ENSPMEG00000017802	srrm4	99	65.402	Poecilia_mexicana
ENSSDUG00000017519	srrm4	99	72.619	ENSPNYG00000007785	srrm4	98	69.474	Pundamilia_nyererei
ENSSDUG00000017519	srrm4	99	68.615	ENSSMAG00000012257	srrm4	99	65.344	Scophthalmus_maximus
ENSSDUG00000017519	srrm4	100	87.912	ENSSLDG00000015130	srrm4	98	90.749	Seriola_lalandi_dorsalis
ENSSDUG00000017519	srrm4	100	78.869	ENSSPAG00000016190	srrm4	99	80.282	Stegastes_partitus
ENSSDUG00000017519	srrm4	73	97.436	ENSXMAG00000002658	srrm4	62	97.436	Xiphophorus_maculatus