EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000017526 (Gene tree)
Gene ID: 111233563
Gene Symbol: chd5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 25404 bases
Position: chrBDQW01000409.1:825567-850970
Accession: 111233563
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000024377	ResIII	PF04851.15	1.2e-08	1	1
ENSSDUP00000024422	ResIII	PF04851.15	1.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000024880	-	5202	-	ENSSDUP00000024422	1733 (aa)	-	-
ENSSDUT00000024836	-	5538	XM_022761409	ENSSDUP00000024377	1845 (aa)	XP_022617130	-

Gene Model

Click here to download ENSSDUG00000017526's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000017526's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000017526	chd5	56	72.976	ENSSDUG00000005792	chd3	91	73.589
ENSSDUG00000017526	chd5	96	69.424	ENSSDUG00000002891	chd4a	96	70.115
ENSSDUG00000017526	chd5	96	79.545	ENSSDUG00000012051	-	86	80.374

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000017526	chd5	93	91.469	ENSG00000116254	CHD5	95	83.086	Homo_sapiens
ENSSDUG00000017526	chd5	92	91.284	ENSAMEG00000009880	CHD5	95	78.127	Ailuropoda_melanoleuca
ENSSDUG00000017526	chd5	99	93.384	ENSACIG00000012582	chd5	99	93.384	Amphilophus_citrinellus
ENSSDUG00000017526	chd5	97	97.992	ENSAOCG00000020356	chd5	94	91.234	Amphiprion_ocellaris
ENSSDUG00000017526	chd5	92	92.523	ENSAPLG00000015475	CHD5	88	81.467	Anas_platyrhynchos
ENSSDUG00000017526	chd5	89	77.178	ENSACAG00000002441	CHD5	93	75.598	Anolis_carolinensis
ENSSDUG00000017526	chd5	86	93.590	ENSANAG00000001078	CHD5	91	78.751	Aotus_nancymaae
ENSSDUG00000017526	chd5	99	87.415	ENSACLG00000003012	chd5	99	85.845	Astatotilapia_calliptera
ENSSDUG00000017526	chd5	94	85.335	ENSAMXG00000008921	chd5	97	85.860	Astyanax_mexicanus
ENSSDUG00000017526	chd5	91	91.163	ENSBTAG00000040477	CHD5	99	78.890	Bos_taurus
ENSSDUG00000017526	chd5	92	91.469	ENSCJAG00000000101	CHD5	94	78.850	Callithrix_jacchus
ENSSDUG00000017526	chd5	95	78.306	ENSCAFG00000019545	CHD5	99	79.203	Canis_familiaris
ENSSDUG00000017526	chd5	97	78.155	ENSCAFG00020008689	CHD5	91	79.324	Canis_lupus_dingo
ENSSDUG00000017526	chd5	92	91.244	ENSCHIG00000015027	CHD5	92	78.672	Capra_hircus
ENSSDUG00000017526	chd5	92	91.469	ENSTSYG00000033991	CHD5	94	77.482	Carlito_syrichta
ENSSDUG00000017526	chd5	98	79.398	ENSCAPG00000009294	CHD5	95	78.950	Cavia_aperea
ENSSDUG00000017526	chd5	98	79.973	ENSCPOG00000025080	CHD5	95	78.896	Cavia_porcellus
ENSSDUG00000017526	chd5	92	91.469	ENSCCAG00000024756	CHD5	94	78.916	Cebus_capucinus
ENSSDUG00000017526	chd5	92	91.469	ENSCATG00000043011	CHD5	94	78.990	Cercocebus_atys
ENSSDUG00000017526	chd5	98	80.176	ENSCLAG00000010589	CHD5	95	78.950	Chinchilla_lanigera
ENSSDUG00000017526	chd5	92	91.469	ENSCSAG00000000733	CHD5	94	78.916	Chlorocebus_sabaeus
ENSSDUG00000017526	chd5	92	91.549	ENSCPBG00000019363	CHD5	99	77.300	Chrysemys_picta_bellii
ENSSDUG00000017526	chd5	92	91.469	ENSCANG00000032302	CHD5	94	79.024	Colobus_angolensis_palliatus
ENSSDUG00000017526	chd5	56	79.961	ENSCGRG00001011042	Chd5	99	80.582	Cricetulus_griseus_chok1gshd
ENSSDUG00000017526	chd5	94	83.267	ENSCGRG00000011341	Chd5	97	78.648	Cricetulus_griseus_crigri
ENSSDUG00000017526	chd5	96	88.259	ENSDARG00000105083	chd5	91	93.011	Danio_rerio
ENSSDUG00000017526	chd5	93	76.667	ENSDARG00000025789	chd4b	85	78.541	Danio_rerio
ENSSDUG00000017526	chd5	89	88.571	ENSDNOG00000046342	CHD5	89	80.136	Dasypus_novemcinctus
ENSSDUG00000017526	chd5	92	91.163	ENSDORG00000005923	Chd5	95	78.513	Dipodomys_ordii
ENSSDUG00000017526	chd5	93	90.826	ENSEASG00005021464	CHD5	92	87.500	Equus_asinus_asinus
ENSSDUG00000017526	chd5	93	90.826	ENSECAG00000025043	CHD5	96	83.594	Equus_caballus
ENSSDUG00000017526	chd5	72	92.000	ENSEEUG00000002772	CHD5	65	92.000	Erinaceus_europaeus
ENSSDUG00000017526	chd5	99	86.462	ENSELUG00000010742	chd5	98	86.382	Esox_lucius
ENSSDUG00000017526	chd5	92	90.826	ENSFCAG00000006319	CHD5	94	79.121	Felis_catus
ENSSDUG00000017526	chd5	92	91.163	ENSFALG00000009740	CHD5	87	85.714	Ficedula_albicollis
ENSSDUG00000017526	chd5	97	78.330	ENSFDAG00000012881	CHD5	92	79.278	Fukomys_damarensis
ENSSDUG00000017526	chd5	93	85.000	ENSGALG00000000747	CHD5	94	78.018	Gallus_gallus
ENSSDUG00000017526	chd5	64	90.909	ENSGACG00000004389	chd5	98	91.243	Gasterosteus_aculeatus
ENSSDUG00000017526	chd5	92	91.549	ENSGAGG00000001590	CHD5	97	89.855	Gopherus_agassizii
ENSSDUG00000017526	chd5	94	91.469	ENSGGOG00000000708	CHD5	95	79.067	Gorilla_gorilla
ENSSDUG00000017526	chd5	99	87.605	ENSHBUG00000013453	chd5	99	87.015	Haplochromis_burtoni
ENSSDUG00000017526	chd5	98	79.128	ENSHGLG00000018184	CHD5	97	78.622	Heterocephalus_glaber_female
ENSSDUG00000017526	chd5	97	73.634	ENSHGLG00100013261	CHD5	92	73.077	Heterocephalus_glaber_male
ENSSDUG00000017526	chd5	97	84.571	ENSIPUG00000005446	chd5	97	84.452	Ictalurus_punctatus
ENSSDUG00000017526	chd5	92	90.826	ENSSTOG00000002778	CHD5	95	79.180	Ictidomys_tridecemlineatus
ENSSDUG00000017526	chd5	95	82.072	ENSJJAG00000019072	Chd5	96	78.790	Jaculus_jaculus
ENSSDUG00000017526	chd5	94	87.642	ENSLOCG00000004944	chd5	93	81.307	Lepisosteus_oculatus
ENSSDUG00000017526	chd5	92	90.826	ENSLAFG00000006348	CHD5	100	76.805	Loxodonta_africana
ENSSDUG00000017526	chd5	92	90.995	ENSMFAG00000033993	CHD5	99	78.887	Macaca_fascicularis
ENSSDUG00000017526	chd5	92	90.995	ENSMMUG00000016838	CHD5	94	78.873	Macaca_mulatta
ENSSDUG00000017526	chd5	92	91.469	ENSMNEG00000040044	CHD5	94	78.916	Macaca_nemestrina
ENSSDUG00000017526	chd5	92	79.589	ENSMLEG00000039166	CHD5	95	75.829	Mandrillus_leucophaeus
ENSSDUG00000017526	chd5	99	85.858	ENSMZEG00005000841	chd5	93	91.925	Maylandia_zebra
ENSSDUG00000017526	chd5	94	81.961	ENSMGAG00000001055	CHD5	94	78.155	Meleagris_gallopavo
ENSSDUG00000017526	chd5	97	79.124	ENSMICG00000017862	CHD5	95	82.016	Microcebus_murinus
ENSSDUG00000017526	chd5	92	90.367	ENSMOCG00000011049	Chd5	89	83.665	Microtus_ochrogaster
ENSSDUG00000017526	chd5	67	91.163	ENSMODG00000006294	CHD5	63	85.000	Monodelphis_domestica
ENSSDUG00000017526	chd5	99	94.546	ENSMALG00000002831	chd5	99	94.654	Monopterus_albus
ENSSDUG00000017526	chd5	92	90.367	MGP_CAROLIEiJ_G0026857	Chd5	93	78.400	Mus_caroli
ENSSDUG00000017526	chd5	92	90.367	ENSMUSG00000005045	Chd5	93	78.760	Mus_musculus
ENSSDUG00000017526	chd5	92	90.367	MGP_PahariEiJ_G0029205	Chd5	94	78.328	Mus_pahari
ENSSDUG00000017526	chd5	92	90.367	MGP_SPRETEiJ_G0027850	Chd5	94	78.450	Mus_spretus
ENSSDUG00000017526	chd5	94	86.307	ENSMPUG00000007122	CHD5	88	82.373	Mustela_putorius_furo
ENSSDUG00000017526	chd5	97	76.589	ENSNGAG00000019812	Chd5	91	78.261	Nannospalax_galili
ENSSDUG00000017526	chd5	94	80.162	ENSNLEG00000010320	CHD5	95	76.965	Nomascus_leucogenys
ENSSDUG00000017526	chd5	85	75.406	ENSOPRG00000004304	CHD5	80	77.344	Ochotona_princeps
ENSSDUG00000017526	chd5	93	86.066	ENSODEG00000010262	CHD5	95	78.939	Octodon_degus
ENSSDUG00000017526	chd5	99	90.252	ENSONIG00000000619	chd5	96	90.147	Oreochromis_niloticus
ENSSDUG00000017526	chd5	92	90.741	ENSOANG00000001819	CHD5	86	87.342	Ornithorhynchus_anatinus
ENSSDUG00000017526	chd5	97	78.065	ENSOGAG00000005703	CHD5	94	78.719	Otolemur_garnettii
ENSSDUG00000017526	chd5	92	90.741	ENSOARG00000013425	CHD5	93	78.047	Ovis_aries
ENSSDUG00000017526	chd5	94	91.469	ENSPPAG00000034048	CHD5	95	79.079	Pan_paniscus
ENSSDUG00000017526	chd5	92	90.826	ENSPPRG00000009453	CHD5	93	78.633	Panthera_pardus
ENSSDUG00000017526	chd5	96	73.280	ENSPTIG00000013926	CHD5	95	74.000	Panthera_tigris_altaica
ENSSDUG00000017526	chd5	94	91.469	ENSPTRG00000000075	CHD5	94	79.079	Pan_troglodytes
ENSSDUG00000017526	chd5	92	91.469	ENSPANG00000006765	CHD5	94	78.916	Papio_anubis
ENSSDUG00000017526	chd5	97	86.472	ENSPKIG00000004282	chd5	95	86.472	Paramormyrops_kingsleyae
ENSSDUG00000017526	chd5	92	78.012	ENSPSIG00000006414	CHD5	97	71.946	Pelodiscus_sinensis
ENSSDUG00000017526	chd5	68	81.954	ENSPEMG00000014799	Chd5	96	81.552	Peromyscus_maniculatus_bairdii
ENSSDUG00000017526	chd5	93	91.163	ENSPCIG00000028310	CHD5	85	85.417	Phascolarctos_cinereus
ENSSDUG00000017526	chd5	96	99.583	ENSPLAG00000005343	chd5	90	99.583	Poecilia_latipinna
ENSSDUG00000017526	chd5	89	87.952	ENSPPYG00000001952	CHD5	97	80.039	Pongo_abelii
ENSSDUG00000017526	chd5	94	84.064	ENSPCOG00000022930	CHD5	94	79.099	Propithecus_coquereli
ENSSDUG00000017526	chd5	95	96.400	ENSPNYG00000003183	chd5	99	91.169	Pundamilia_nyererei
ENSSDUG00000017526	chd5	99	77.314	ENSRNOG00000011268	Chd5	96	78.085	Rattus_norvegicus
ENSSDUG00000017526	chd5	95	91.469	ENSRBIG00000032140	CHD5	96	78.692	Rhinopithecus_bieti
ENSSDUG00000017526	chd5	92	91.469	ENSRROG00000041146	CHD5	94	78.753	Rhinopithecus_roxellana
ENSSDUG00000017526	chd5	92	91.469	ENSSBOG00000001955	CHD5	99	80.453	Saimiri_boliviensis_boliviensis
ENSSDUG00000017526	chd5	94	76.660	ENSSHAG00000018641	CHD5	97	72.855	Sarcophilus_harrisii
ENSSDUG00000017526	chd5	94	88.664	ENSSFOG00015006296	chd5	91	84.939	Scleropages_formosus
ENSSDUG00000017526	chd5	99	72.532	ENSSPUG00000010622	CHD5	94	73.507	Sphenodon_punctatus
ENSSDUG00000017526	chd5	93	90.000	ENSSSCG00000003366	CHD5	99	79.105	Sus_scrofa
ENSSDUG00000017526	chd5	93	85.652	ENSTGUG00000002634	-	90	84.188	Taeniopygia_guttata
ENSSDUG00000017526	chd5	57	89.009	ENSTNIG00000004346	chd5	99	89.437	Tetraodon_nigroviridis
ENSSDUG00000017526	chd5	96	77.936	ENSTTRG00000010468	CHD5	94	78.287	Tursiops_truncatus
ENSSDUG00000017526	chd5	93	91.284	ENSUAMG00000024509	CHD5	92	87.442	Ursus_americanus
ENSSDUG00000017526	chd5	90	92.105	ENSUMAG00000024173	CHD5	95	75.219	Ursus_maritimus
ENSSDUG00000017526	chd5	97	79.826	ENSVVUG00000026480	CHD5	89	92.000	Vulpes_vulpes
ENSSDUG00000017526	chd5	99	74.475	ENSXETG00000002904	chd5	97	73.854	Xenopus_tropicalis
ENSSDUG00000017526	chd5	65	91.606	ENSXCOG00000014202	chd5	98	92.844	Xiphophorus_couchianus