EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000017591 (Gene tree)
Gene ID: 111227948
Gene Symbol: snrnp70
Alias: U1 small ribonucleoprotein 70kd|snrp70|wu:fc20b04|zgc:136450
Full Name: small nuclear ribonucleoprotein U1 subunit 70
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 8389 bases
Position: chrBDQW01000192.1:669600-677988
Accession: 111227948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000024207	RRM_1	PF00076.22	1.6e-19	1	1
ENSSDUP00000024207	U1snRNP70_N	PF12220.8	4.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000024662	-	1918	XM_022753699	ENSSDUP00000024207	485 (aa)	XP_022609420	UPI000BBEFBDE

Gene Model

Click here to download ENSSDUG00000017591's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000017591's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000017591	snrnp70	51	49.398	WBGene00004390	rnp-7	57	51.579	Caenorhabditis_elegans
ENSSDUG00000017591	snrnp70	100	70.238	ENSMMOG00000005467	snrnp70	78	98.661	Mola_mola
ENSSDUG00000017591	snrnp70	56	81.481	ENSPPAG00000035067	SNRNP70	99	89.634	Pan_paniscus
ENSSDUG00000017591	snrnp70	50	87.243	ENSPTRG00000011277	SNRNP70	99	89.634	Pan_troglodytes
ENSSDUG00000017591	snrnp70	100	98.163	ENSSLDG00000009459	snrnp70	100	98.163	Seriola_lalandi_dorsalis