EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000017824 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 798 bases
Position: chrBDQW01000226.1:5907424-5908221
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000024616	MMR_HSR1	PF01926.23	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000025075	-	432	-	ENSSDUP00000024616	143 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000017824's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000017824's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000017824	-	89	38.583	ENSSDUG00000015982	rasd4	55	37.391
ENSSDUG00000017824	-	85	38.095	ENSSDUG00000005037	-	54	34.783
ENSSDUG00000017824	-	86	50.407	ENSSDUG00000010675	si:ch73-116o1.2	51	47.748
ENSSDUG00000017824	-	83	36.364	ENSSDUG00000003823	rab18a	52	36.111
ENSSDUG00000017824	-	86	34.677	ENSSDUG00000013724	rab2a	55	33.929
ENSSDUG00000017824	-	88	36.220	ENSSDUG00000018970	RAB6B	60	36.220
ENSSDUG00000017824	-	86	34.677	ENSSDUG00000004633	RAB15	52	33.929
ENSSDUG00000017824	-	94	37.037	ENSSDUG00000009122	rheb	65	37.190
ENSSDUG00000017824	-	84	38.525	ENSSDUG00000001791	rab33ba	50	38.525
ENSSDUG00000017824	-	92	37.226	ENSSDUG00000008151	zgc:101559	53	36.585
ENSSDUG00000017824	-	86	33.065	ENSSDUG00000005627	rab15	52	32.143
ENSSDUG00000017824	-	84	38.333	ENSSDUG00000007311	rhebl1	59	37.615
ENSSDUG00000017824	-	88	37.008	ENSSDUG00000009251	rab6bb	61	37.008
ENSSDUG00000017824	-	80	32.759	ENSSDUG00000005960	rab18b	51	31.429
ENSSDUG00000017824	-	87	30.952	ENSSDUG00000011851	rab42a	52	30.973
ENSSDUG00000017824	-	88	36.220	ENSSDUG00000021882	rab6ba	61	36.220
ENSSDUG00000017824	-	83	31.008	ENSSDUG00000011130	rasl10a	61	30.894
ENSSDUG00000017824	-	89	32.558	ENSSDUG00000014091	-	53	33.628
ENSSDUG00000017824	-	94	94.815	ENSSDUG00000014258	RAP2B	97	94.815
ENSSDUG00000017824	-	100	35.374	ENSSDUG00000017131	rab22a	74	35.374
ENSSDUG00000017824	-	85	35.659	ENSSDUG00000006618	RAB17	50	33.884
ENSSDUG00000017824	-	83	33.884	ENSSDUG00000019885	-	50	33.884
ENSSDUG00000017824	-	87	34.400	ENSSDUG00000023008	rab5c	50	33.036
ENSSDUG00000017824	-	89	51.181	ENSSDUG00000023163	rras2	56	50.000
ENSSDUG00000017824	-	73	32.075	ENSSDUG00000023508	rab23	51	32.075
ENSSDUG00000017824	-	88	37.008	ENSSDUG00000013496	-	61	37.008
ENSSDUG00000017824	-	84	55.000	ENSSDUG00000019086	hrasb	63	55.000
ENSSDUG00000017824	-	86	34.677	ENSSDUG00000005719	si:dkey-16l2.16	53	34.821
ENSSDUG00000017824	-	85	37.302	ENSSDUG00000003386	rab9a	56	33.913
ENSSDUG00000017824	-	87	42.742	ENSSDUG00000014082	si:cabz01085950.1	55	41.441
ENSSDUG00000017824	-	87	34.884	ENSSDUG00000008011	-	57	32.203
ENSSDUG00000017824	-	98	34.043	ENSSDUG00000004950	rab35b	63	33.333
ENSSDUG00000017824	-	83	35.537	ENSSDUG00000013968	rab33a	51	35.537
ENSSDUG00000017824	-	87	39.062	ENSSDUG00000007575	rab9b	57	35.897
ENSSDUG00000017824	-	85	31.746	ENSSDUG00000019738	si:dkey-13a21.4	56	30.435
ENSSDUG00000017824	-	85	40.164	ENSSDUG00000020340	-	53	38.739
ENSSDUG00000017824	-	87	35.200	ENSSDUG00000009835	rab5aa	51	33.929
ENSSDUG00000017824	-	86	31.452	ENSSDUG00000013050	-	52	30.357
ENSSDUG00000017824	-	84	55.833	ENSSDUG00000017779	kras	64	55.833
ENSSDUG00000017824	-	86	37.903	ENSSDUG00000016888	rab1ab	51	37.500
ENSSDUG00000017824	-	86	32.258	ENSSDUG00000004551	rab14	52	31.250
ENSSDUG00000017824	-	86	37.903	ENSSDUG00000022535	RAB1A	55	37.500
ENSSDUG00000017824	-	86	36.290	ENSSDUG00000004698	rab1ba	55	35.714
ENSSDUG00000017824	-	86	36.290	ENSSDUG00000006307	-	59	35.714
ENSSDUG00000017824	-	84	40.000	ENSSDUG00000016858	-	59	38.532
ENSSDUG00000017824	-	91	35.338	ENSSDUG00000013325	rab30	58	33.884

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000017824	-	100	88.811	ENSCPBG00000018802	-	97	88.811	Chrysemys_picta_bellii
ENSSDUG00000017824	-	100	98.601	ENSCSEG00000015746	-	99	98.601	Cynoglossus_semilaevis
ENSSDUG00000017824	-	99	99.296	ENSMMOG00000018992	-	100	99.296	Mola_mola
ENSSDUG00000017824	-	99	97.887	ENSMALG00000015576	-	100	97.887	Monopterus_albus
ENSSDUG00000017824	-	100	100.000	ENSSLDG00000014472	-	100	100.000	Seriola_lalandi_dorsalis