EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000017945 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 1102 bases
Position: chrBDQW01002262.1:676826-677927
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000024710	RVT_1	PF00078.27	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000025169	-	897	-	ENSSDUP00000024710	298 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000017945's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000017945's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000017945	-	68	33.469	ENSSDUG00000021791	-	81	33.469
ENSSDUG00000017945	-	63	30.702	ENSSDUG00000015364	-	51	30.802

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000017945	-	60	36.161	ENSAPOG00000015742	-	70	36.161	Acanthochromis_polyacanthus
ENSSDUG00000017945	-	61	30.357	ENSAPOG00000014771	-	56	30.357	Acanthochromis_polyacanthus
ENSSDUG00000017945	-	53	30.978	ENSAPOG00000001366	-	50	30.978	Acanthochromis_polyacanthus
ENSSDUG00000017945	-	68	34.008	ENSACIG00000010538	-	63	34.008	Amphilophus_citrinellus
ENSSDUG00000017945	-	80	32.624	ENSAOCG00000019069	-	75	32.624	Amphiprion_ocellaris
ENSSDUG00000017945	-	66	35.270	ENSAOCG00000014605	-	50	35.270	Amphiprion_ocellaris
ENSSDUG00000017945	-	69	39.516	ENSAOCG00000000894	-	73	39.516	Amphiprion_ocellaris
ENSSDUG00000017945	-	71	37.891	ENSACLG00000013571	-	62	37.891	Astatotilapia_calliptera
ENSSDUG00000017945	-	72	37.743	ENSACLG00000012857	-	69	37.743	Astatotilapia_calliptera
ENSSDUG00000017945	-	67	30.453	ENSACLG00000011319	-	62	30.453	Astatotilapia_calliptera
ENSSDUG00000017945	-	58	36.574	ENSAMXG00000041014	-	81	36.574	Astyanax_mexicanus
ENSSDUG00000017945	-	58	37.500	ENSAMXG00000040763	-	54	37.500	Astyanax_mexicanus
ENSSDUG00000017945	-	76	34.545	ENSCVAG00000018360	-	66	34.545	Cyprinodon_variegatus
ENSSDUG00000017945	-	74	35.055	ENSHBUG00000007736	-	64	35.055	Haplochromis_burtoni
ENSSDUG00000017945	-	74	34.559	ENSKMAG00000014393	-	63	34.559	Kryptolebias_marmoratus
ENSSDUG00000017945	-	66	37.712	ENSLBEG00000004148	-	50	37.712	Labrus_bergylta
ENSSDUG00000017945	-	76	31.227	ENSLBEG00000020242	-	73	31.227	Labrus_bergylta
ENSSDUG00000017945	-	74	34.091	ENSMZEG00005016362	-	91	34.091	Maylandia_zebra
ENSSDUG00000017945	-	67	30.453	ENSMZEG00005025877	-	56	30.453	Maylandia_zebra
ENSSDUG00000017945	-	67	30.453	ENSMZEG00005008304	-	56	30.453	Maylandia_zebra
ENSSDUG00000017945	-	53	43.284	ENSNBRG00000003891	-	100	43.284	Neolamprologus_brichardi
ENSSDUG00000017945	-	53	30.978	ENSNBRG00000013792	-	53	30.978	Neolamprologus_brichardi
ENSSDUG00000017945	-	71	38.281	ENSNBRG00000012595	-	58	38.281	Neolamprologus_brichardi
ENSSDUG00000017945	-	70	34.127	ENSNBRG00000000972	-	62	34.127	Neolamprologus_brichardi
ENSSDUG00000017945	-	71	37.008	ENSORLG00000024236	-	66	37.008	Oryzias_latipes
ENSSDUG00000017945	-	73	33.582	ENSORLG00000023713	-	67	33.582	Oryzias_latipes
ENSSDUG00000017945	-	78	32.374	ENSORLG00000028454	-	83	33.083	Oryzias_latipes
ENSSDUG00000017945	-	71	38.281	ENSORLG00020014149	-	78	38.281	Oryzias_latipes_hni
ENSSDUG00000017945	-	59	38.532	ENSORLG00020007779	-	58	38.532	Oryzias_latipes_hni
ENSSDUG00000017945	-	59	36.697	ENSORLG00020018629	-	57	36.697	Oryzias_latipes_hni
ENSSDUG00000017945	-	53	36.957	ENSORLG00020022004	-	62	36.957	Oryzias_latipes_hni
ENSSDUG00000017945	-	59	36.697	ENSORLG00020007002	-	85	36.697	Oryzias_latipes_hni
ENSSDUG00000017945	-	68	36.842	ENSORLG00015000419	-	70	36.842	Oryzias_latipes_hsok
ENSSDUG00000017945	-	59	37.615	ENSORLG00015007703	-	55	37.615	Oryzias_latipes_hsok
ENSSDUG00000017945	-	56	32.536	ENSORLG00015021848	-	69	32.536	Oryzias_latipes_hsok
ENSSDUG00000017945	-	69	39.516	ENSORLG00015022393	-	82	39.516	Oryzias_latipes_hsok
ENSSDUG00000017945	-	67	31.915	ENSOMEG00000013211	-	56	31.915	Oryzias_melastigma
ENSSDUG00000017945	-	54	36.757	ENSPKIG00000013511	-	63	36.757	Paramormyrops_kingsleyae
ENSSDUG00000017945	-	59	32.020	ENSPMGG00000014421	-	53	32.020	Periophthalmus_magnuspinnatus
ENSSDUG00000017945	-	77	31.136	ENSPLAG00000015080	-	64	30.996	Poecilia_latipinna
ENSSDUG00000017945	-	68	31.579	ENSPREG00000010319	-	59	31.579	Poecilia_reticulata
ENSSDUG00000017945	-	69	31.855	ENSPNYG00000002466	-	81	31.855	Pundamilia_nyererei
ENSSDUG00000017945	-	80	34.982	ENSPNAG00000002786	-	68	34.982	Pygocentrus_nattereri
ENSSDUG00000017945	-	66	38.028	ENSPNAG00000010342	-	78	38.028	Pygocentrus_nattereri
ENSSDUG00000017945	-	59	37.156	ENSPNAG00000014375	-	52	37.156	Pygocentrus_nattereri
ENSSDUG00000017945	-	65	36.441	ENSSMAG00000014015	-	55	36.441	Scophthalmus_maximus
ENSSDUG00000017945	-	70	32.895	ENSSLDG00000006955	-	57	32.895	Seriola_lalandi_dorsalis
ENSSDUG00000017945	-	72	33.083	ENSSPUG00000015446	-	59	33.083	Sphenodon_punctatus
ENSSDUG00000017945	-	69	31.390	ENSSPAG00000012089	-	64	31.390	Stegastes_partitus
ENSSDUG00000017945	-	65	31.356	ENSSPAG00000000151	-	52	31.356	Stegastes_partitus
ENSSDUG00000017945	-	66	32.780	ENSXCOG00000016894	-	71	32.780	Xiphophorus_couchianus
ENSSDUG00000017945	-	69	37.200	ENSXMAG00000026184	-	83	37.200	Xiphophorus_maculatus
ENSSDUG00000017945	-	67	31.602	ENSXMAG00000023211	-	52	31.602	Xiphophorus_maculatus