EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000017984 (Gene tree)
Gene ID: 111237115
Gene Symbol: rbm25a
Alias: si:ch211-12d10.5
Full Name: RNA-binding protein 25-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 10863 bases
Position: chrBDQW01000811.1:140453-151315
Accession: 111237115
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000024843	RRM_1	PF00076.22	1.3e-08	1	1
ENSSDUP00000024796	RRM_1	PF00076.22	1.3e-08	1	1
ENSSDUP00000024843	PWI	PF01480.17	1.1e-13	1	1
ENSSDUP00000024796	PWI	PF01480.17	1.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000025303	-	2418	-	ENSSDUP00000024843	805 (aa)	-	-
ENSSDUT00000025256	-	3266	XM_022766092	ENSSDUP00000024796	825 (aa)	XP_022621813	UPI000BBEF28A

Gene Model

Click here to download ENSSDUG00000017984's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000017984's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000017984	rbm25a	59	77.871	ENSSDUG00000003839	-	79	79.826

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000017984	rbm25a	58	77.612	ENSAPOG00000015321	rbm25b	56	79.386	Acanthochromis_polyacanthus
ENSSDUG00000017984	rbm25a	100	96.368	ENSAPOG00000017757	rbm25a	100	96.368	Acanthochromis_polyacanthus
ENSSDUG00000017984	rbm25a	59	93.008	ENSACIG00000019482	rbm25a	57	93.390	Amphilophus_citrinellus
ENSSDUG00000017984	rbm25a	58	73.529	ENSACIG00000014178	rbm25b	55	74.242	Amphilophus_citrinellus
ENSSDUG00000017984	rbm25a	59	74.207	ENSAOCG00000019308	rbm25b	55	73.523	Amphiprion_ocellaris
ENSSDUG00000017984	rbm25a	96	91.386	ENSAOCG00000013695	rbm25a	99	91.386	Amphiprion_ocellaris
ENSSDUG00000017984	rbm25a	100	93.012	ENSAPEG00000007514	rbm25a	57	96.406	Amphiprion_percula
ENSSDUG00000017984	rbm25a	59	77.778	ENSAPEG00000009666	rbm25b	58	79.386	Amphiprion_percula
ENSSDUG00000017984	rbm25a	100	96.848	ENSATEG00000020676	rbm25a	100	96.848	Anabas_testudineus
ENSSDUG00000017984	rbm25a	60	76.091	ENSATEG00000017312	rbm25b	55	79.167	Anabas_testudineus
ENSSDUG00000017984	rbm25a	100	79.335	ENSACLG00000027482	rbm25a	92	83.135	Astatotilapia_calliptera
ENSSDUG00000017984	rbm25a	58	78.858	ENSACLG00000024359	rbm25b	55	80.525	Astatotilapia_calliptera
ENSSDUG00000017984	rbm25a	59	74.792	ENSAMXG00000024525	rbm25b	54	76.739	Astyanax_mexicanus
ENSSDUG00000017984	rbm25a	55	34.298	WBGene00012245	W04D2.6	81	33.114	Caenorhabditis_elegans
ENSSDUG00000017984	rbm25a	64	86.486	ENSCHOG00000008903	RBM25	63	86.301	Choloepus_hoffmanni
ENSSDUG00000017984	rbm25a	60	73.608	ENSCSEG00000020737	rbm25b	56	75.764	Cynoglossus_semilaevis
ENSSDUG00000017984	rbm25a	57	89.254	ENSCSEG00000009430	rbm25a	56	89.427	Cynoglossus_semilaevis
ENSSDUG00000017984	rbm25a	60	73.878	ENSCVAG00000003478	rbm25b	55	77.074	Cyprinodon_variegatus
ENSSDUG00000017984	rbm25a	59	80.739	ENSCVAG00000005498	rbm25a	99	83.715	Cyprinodon_variegatus
ENSSDUG00000017984	rbm25a	63	79.159	ENSDARG00000006395	rbm25b	55	74.730	Danio_rerio
ENSSDUG00000017984	rbm25a	54	67.426	ENSDARG00000039266	rbm25a	99	97.468	Danio_rerio
ENSSDUG00000017984	rbm25a	87	71.552	FBgn0028474	CG4119	67	73.874	Drosophila_melanogaster
ENSSDUG00000017984	rbm25a	58	69.978	ENSELUG00000021847	rbm25a	51	69.383	Esox_lucius
ENSSDUG00000017984	rbm25a	58	72.822	ENSELUG00000007730	rbm25b	56	75.803	Esox_lucius
ENSSDUG00000017984	rbm25a	100	82.420	ENSFHEG00000005318	rbm25a	60	82.081	Fundulus_heteroclitus
ENSSDUG00000017984	rbm25a	59	77.871	ENSFHEG00000003513	rbm25b	56	80.131	Fundulus_heteroclitus
ENSSDUG00000017984	rbm25a	82	74.894	ENSGMOG00000014070	rbm25a	87	76.923	Gadus_morhua
ENSSDUG00000017984	rbm25a	98	72.565	ENSGAFG00000001092	rbm25b	50	79.870	Gambusia_affinis
ENSSDUG00000017984	rbm25a	100	83.856	ENSGAFG00000018036	rbm25a	54	84.902	Gambusia_affinis
ENSSDUG00000017984	rbm25a	58	79.070	ENSHBUG00000018499	rbm25b	55	80.744	Haplochromis_burtoni
ENSSDUG00000017984	rbm25a	57	93.846	ENSHBUG00000016908	rbm25a	57	93.590	Haplochromis_burtoni
ENSSDUG00000017984	rbm25a	87	71.812	ENSHCOG00000018433	rbm25a	56	77.241	Hippocampus_comes
ENSSDUG00000017984	rbm25a	100	68.884	ENSHCOG00000000142	rbm25b	55	74.091	Hippocampus_comes
ENSSDUG00000017984	rbm25a	59	81.200	ENSKMAG00000016242	rbm25a	91	85.714	Kryptolebias_marmoratus
ENSSDUG00000017984	rbm25a	57	78.879	ENSKMAG00000018826	rbm25b	55	79.476	Kryptolebias_marmoratus
ENSSDUG00000017984	rbm25a	100	72.999	ENSLBEG00000010667	rbm25b	56	78.186	Labrus_bergylta
ENSSDUG00000017984	rbm25a	63	75.895	ENSLACG00000011845	RBM25	51	74.449	Latimeria_chalumnae
ENSSDUG00000017984	rbm25a	58	78.361	ENSMAMG00000004524	rbm25b	55	79.736	Mastacembelus_armatus
ENSSDUG00000017984	rbm25a	58	82.516	ENSMAMG00000000165	rbm25a	51	88.679	Mastacembelus_armatus
ENSSDUG00000017984	rbm25a	58	78.858	ENSMZEG00005001453	rbm25b	55	80.525	Maylandia_zebra
ENSSDUG00000017984	rbm25a	57	93.846	ENSMZEG00005011183	rbm25a	57	93.590	Maylandia_zebra
ENSSDUG00000017984	rbm25a	58	89.316	ENSMMOG00000009065	rbm25a	56	88.889	Mola_mola
ENSSDUG00000017984	rbm25a	59	77.640	ENSMALG00000020441	rbm25b	86	79.956	Monopterus_albus
ENSSDUG00000017984	rbm25a	57	93.626	ENSNBRG00000003761	rbm25a	57	93.376	Neolamprologus_brichardi
ENSSDUG00000017984	rbm25a	100	62.245	ENSOCUG00000013737	RBM25	83	74.614	Oryctolagus_cuniculus
ENSSDUG00000017984	rbm25a	58	76.409	ENSORLG00000011874	rbm25b	55	78.166	Oryzias_latipes
ENSSDUG00000017984	rbm25a	58	76.409	ENSORLG00020016422	rbm25b	55	78.118	Oryzias_latipes_hni
ENSSDUG00000017984	rbm25a	72	82.847	ENSORLG00015022499	rbm25a	52	76.011	Oryzias_latipes_hsok
ENSSDUG00000017984	rbm25a	58	76.715	ENSORLG00015011269	rbm25b	55	78.821	Oryzias_latipes_hsok
ENSSDUG00000017984	rbm25a	53	84.889	ENSOMEG00000022138	rbm25a	59	85.246	Oryzias_melastigma
ENSSDUG00000017984	rbm25a	59	75.579	ENSOMEG00000023172	rbm25b	55	78.289	Oryzias_melastigma
ENSSDUG00000017984	rbm25a	59	78.661	ENSPKIG00000003203	rbm25b	95	73.494	Paramormyrops_kingsleyae
ENSSDUG00000017984	rbm25a	55	70.814	ENSPMGG00000001791	rbm25a	100	71.041	Periophthalmus_magnuspinnatus
ENSSDUG00000017984	rbm25a	59	76.749	ENSPMGG00000015740	rbm25b	56	77.489	Periophthalmus_magnuspinnatus
ENSSDUG00000017984	rbm25a	100	83.467	ENSPFOG00000017931	rbm25a	91	88.278	Poecilia_formosa
ENSSDUG00000017984	rbm25a	59	77.801	ENSPFOG00000018808	rbm25b	55	79.826	Poecilia_formosa
ENSSDUG00000017984	rbm25a	100	83.918	ENSPLAG00000018338	rbm25a	91	88.278	Poecilia_latipinna
ENSSDUG00000017984	rbm25a	59	77.593	ENSPMEG00000019161	rbm25b	55	79.826	Poecilia_mexicana
ENSSDUG00000017984	rbm25a	100	83.797	ENSPMEG00000024470	rbm25a	91	88.278	Poecilia_mexicana
ENSSDUG00000017984	rbm25a	59	77.893	ENSPREG00000008522	rbm25b	55	80.130	Poecilia_reticulata
ENSSDUG00000017984	rbm25a	100	84.867	ENSPREG00000009228	rbm25a	91	88.278	Poecilia_reticulata
ENSSDUG00000017984	rbm25a	51	77.473	ENSPCAG00000006226	RBM25	77	75.385	Procavia_capensis
ENSSDUG00000017984	rbm25a	57	88.503	ENSPNYG00000022596	rbm25a	53	88.987	Pundamilia_nyererei
ENSSDUG00000017984	rbm25a	59	71.399	ENSPNAG00000012024	rbm25b	55	77.342	Pygocentrus_nattereri
ENSSDUG00000017984	rbm25a	61	80.498	ENSSBOG00000034153	RBM25	70	79.200	Saimiri_boliviensis_boliviensis
ENSSDUG00000017984	rbm25a	58	79.873	ENSSFOG00015007093	rbm25	57	80.085	Scleropages_formosus
ENSSDUG00000017984	rbm25a	58	95.106	ENSSMAG00000009745	rbm25a	58	95.106	Scophthalmus_maximus
ENSSDUG00000017984	rbm25a	59	74.433	ENSSMAG00000002520	rbm25b	57	76.068	Scophthalmus_maximus
ENSSDUG00000017984	rbm25a	57	78.571	ENSSLDG00000024573	rbm25b	98	79.826	Seriola_lalandi_dorsalis
ENSSDUG00000017984	rbm25a	100	99.879	ENSSLDG00000010342	rbm25a	100	99.879	Seriola_lalandi_dorsalis
ENSSDUG00000017984	rbm25a	100	95.346	ENSSPAG00000011114	rbm25a	100	95.346	Stegastes_partitus
ENSSDUG00000017984	rbm25a	59	77.254	ENSSPAG00000016168	rbm25b	56	79.650	Stegastes_partitus
ENSSDUG00000017984	rbm25a	58	84.335	ENSTRUG00000003076	rbm25a	59	83.956	Takifugu_rubripes
ENSSDUG00000017984	rbm25a	58	75.574	ENSTRUG00000017964	rbm25b	56	77.657	Takifugu_rubripes
ENSSDUG00000017984	rbm25a	62	79.808	ENSTBEG00000010538	-	67	79.808	Tupaia_belangeri
ENSSDUG00000017984	rbm25a	53	73.000	ENSVPAG00000009052	RBM25	77	74.945	Vicugna_pacos
ENSSDUG00000017984	rbm25a	100	83.353	ENSXCOG00000004043	RBM25	54	84.902	Xiphophorus_couchianus
ENSSDUG00000017984	rbm25a	100	68.503	ENSXCOG00000002222	rbm25b	53	71.711	Xiphophorus_couchianus
ENSSDUG00000017984	rbm25a	100	73.846	ENSXMAG00000017290	rbm25b	55	79.785	Xiphophorus_maculatus
ENSSDUG00000017984	rbm25a	100	84.321	ENSXMAG00000009077	RBM25	59	84.127	Xiphophorus_maculatus