EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000018065 (Gene tree)
Gene ID: 111217427
Gene Symbol: gpatch8
Alias: fa12a04|fb30h12|gpatc8|wu:fa12a04|wu:fb30h12|wu:fj32a09
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 15517 bases
Position: chrBDQW01000044.1:997830-1013346
Accession: 111217427
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000024872	zf-C2H2_jaz	PF12171.8	5.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000025333	-	5753	XM_022739286	ENSSDUP00000024872	1444 (aa)	XP_022595007	-

Gene Model

Click here to download ENSSDUG00000018065's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000018065's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000018065	gpatch8	100	90.865	ENSAPOG00000023938	gpatch8	100	90.865	Acanthochromis_polyacanthus
ENSSDUG00000018065	gpatch8	99	87.491	ENSACIG00000012241	gpatch8	96	87.077	Amphilophus_citrinellus
ENSSDUG00000018065	gpatch8	100	90.588	ENSAOCG00000018102	gpatch8	100	90.483	Amphiprion_ocellaris
ENSSDUG00000018065	gpatch8	100	90.450	ENSAPEG00000016776	gpatch8	100	90.450	Amphiprion_percula
ENSSDUG00000018065	gpatch8	100	87.612	ENSATEG00000003247	gpatch8	100	87.543	Anabas_testudineus
ENSSDUG00000018065	gpatch8	100	86.948	ENSACLG00000004165	gpatch8	100	87.017	Astatotilapia_calliptera
ENSSDUG00000018065	gpatch8	57	58.472	ENSAMXG00000041683	gpatch8	55	60.306	Astyanax_mexicanus
ENSSDUG00000018065	gpatch8	100	83.299	ENSCSEG00000021277	gpatch8	100	83.057	Cynoglossus_semilaevis
ENSSDUG00000018065	gpatch8	100	82.300	ENSCVAG00000013477	gpatch8	100	82.103	Cyprinodon_variegatus
ENSSDUG00000018065	gpatch8	100	63.080	ENSDARG00000059768	gpatch8	54	58.500	Danio_rerio
ENSSDUG00000018065	gpatch8	59	63.728	ENSELUG00000019920	gpatch8	55	63.492	Esox_lucius
ENSSDUG00000018065	gpatch8	53	72.809	ENSFHEG00000005791	gpatch8	100	80.181	Fundulus_heteroclitus
ENSSDUG00000018065	gpatch8	66	62.642	ENSGALG00000041556	GPATCH8	55	62.121	Gallus_gallus
ENSSDUG00000018065	gpatch8	100	82.182	ENSGAFG00000018138	gpatch8	96	82.113	Gambusia_affinis
ENSSDUG00000018065	gpatch8	100	86.837	ENSHBUG00000002669	gpatch8	100	87.112	Haplochromis_burtoni
ENSSDUG00000018065	gpatch8	73	55.556	ENSHGLG00100010738	GPATCH8	88	54.328	Heterocephalus_glaber_male
ENSSDUG00000018065	gpatch8	100	73.558	ENSHCOG00000017518	gpatch8	96	72.940	Hippocampus_comes
ENSSDUG00000018065	gpatch8	57	59.649	ENSIPUG00000015431	gpatch8	51	57.947	Ictalurus_punctatus
ENSSDUG00000018065	gpatch8	100	83.253	ENSKMAG00000018364	gpatch8	100	82.977	Kryptolebias_marmoratus
ENSSDUG00000018065	gpatch8	100	85.714	ENSLBEG00000023352	gpatch8	100	85.714	Labrus_bergylta
ENSSDUG00000018065	gpatch8	59	81.034	ENSLOCG00000012265	gpatch8	67	75.177	Lepisosteus_oculatus
ENSSDUG00000018065	gpatch8	99	91.113	ENSMAMG00000001618	gpatch8	100	91.113	Mastacembelus_armatus
ENSSDUG00000018065	gpatch8	100	86.878	ENSMZEG00005022584	gpatch8	100	86.948	Maylandia_zebra
ENSSDUG00000018065	gpatch8	59	83.860	ENSMMOG00000020472	gpatch8	96	84.171	Mola_mola
ENSSDUG00000018065	gpatch8	99	86.445	ENSMALG00000004204	gpatch8	96	85.201	Monopterus_albus
ENSSDUG00000018065	gpatch8	100	87.086	ENSNBRG00000016402	gpatch8	96	87.293	Neolamprologus_brichardi
ENSSDUG00000018065	gpatch8	100	83.644	ENSONIG00000001292	gpatch8	100	86.782	Oreochromis_niloticus
ENSSDUG00000018065	gpatch8	59	50.859	ENSPKIG00000018753	gpatch8	52	53.846	Paramormyrops_kingsleyae
ENSSDUG00000018065	gpatch8	100	79.164	ENSPMGG00000000730	gpatch8	95	78.987	Periophthalmus_magnuspinnatus
ENSSDUG00000018065	gpatch8	100	82.069	ENSPFOG00000014833	gpatch8	96	82.966	Poecilia_formosa
ENSSDUG00000018065	gpatch8	100	81.862	ENSPLAG00000001035	gpatch8	96	82.759	Poecilia_latipinna
ENSSDUG00000018065	gpatch8	100	82.414	ENSPMEG00000024032	gpatch8	100	82.897	Poecilia_mexicana
ENSSDUG00000018065	gpatch8	100	82.483	ENSPREG00000008911	gpatch8	100	82.552	Poecilia_reticulata
ENSSDUG00000018065	gpatch8	100	87.086	ENSPNYG00000009426	gpatch8	96	87.155	Pundamilia_nyererei
ENSSDUG00000018065	gpatch8	57	61.977	ENSPNAG00000016200	gpatch8	55	63.073	Pygocentrus_nattereri
ENSSDUG00000018065	gpatch8	53	56.375	ENSSFOG00015004299	GPATCH8	50	56.835	Scleropages_formosus
ENSSDUG00000018065	gpatch8	53	53.442	ENSSFOG00015021377	-	51	54.203	Scleropages_formosus
ENSSDUG00000018065	gpatch8	100	98.753	ENSSLDG00000009225	gpatch8	96	98.753	Seriola_lalandi_dorsalis
ENSSDUG00000018065	gpatch8	100	90.588	ENSSPAG00000011368	gpatch8	100	90.588	Stegastes_partitus
ENSSDUG00000018065	gpatch8	100	79.766	ENSTRUG00000020474	gpatch8	96	79.078	Takifugu_rubripes
ENSSDUG00000018065	gpatch8	58	62.500	ENSTBEG00000009486	GPATCH8	50	63.118	Tupaia_belangeri
ENSSDUG00000018065	gpatch8	99	81.793	ENSXCOG00000016680	gpatch8	96	81.931	Xiphophorus_couchianus
ENSSDUG00000018065	gpatch8	100	81.555	ENSXMAG00000009217	gpatch8	100	81.968	Xiphophorus_maculatus