EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000018079 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 4422 bases
Position: chrBDQW01000017.1:3603159-3607580
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000024897	PARP	PF00644.20	7.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000025357	-	507	-	ENSSDUP00000024897	168 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000018079's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000018079's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000018079	-	88	50.676	ENSSDUG00000012574	-	90	50.676
ENSSDUG00000018079	-	82	74.638	ENSSDUG00000018069	gig2p	65	74.638
ENSSDUG00000018079	-	88	48.052	ENSSDUG00000006287	-	90	48.052

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000018079	-	87	84.354	ENSAPOG00000002358	gig2p	82	84.354	Acanthochromis_polyacanthus
ENSSDUG00000018079	-	73	54.472	ENSAPOG00000010190	gig2h	79	54.472	Acanthochromis_polyacanthus
ENSSDUG00000018079	-	76	54.688	ENSACIG00000023385	-	80	54.688	Amphilophus_citrinellus
ENSSDUG00000018079	-	82	68.613	ENSACIG00000006917	-	86	68.613	Amphilophus_citrinellus
ENSSDUG00000018079	-	83	83.571	ENSACIG00000006934	gig2p	68	83.571	Amphilophus_citrinellus
ENSSDUG00000018079	-	74	56.800	ENSACIG00000018452	-	79	56.800	Amphilophus_citrinellus
ENSSDUG00000018079	-	69	61.207	ENSACIG00000009062	-	80	61.207	Amphilophus_citrinellus
ENSSDUG00000018079	-	76	58.871	ENSAOCG00000010944	-	69	58.871	Amphiprion_ocellaris
ENSSDUG00000018079	-	87	84.354	ENSAOCG00000003416	gig2p	65	84.354	Amphiprion_ocellaris
ENSSDUG00000018079	-	87	83.673	ENSAPEG00000017256	gig2p	65	83.673	Amphiprion_percula
ENSSDUG00000018079	-	81	80.882	ENSATEG00000003163	gig2p	88	80.882	Anabas_testudineus
ENSSDUG00000018079	-	80	76.296	ENSATEG00000003229	gig2p	67	76.296	Anabas_testudineus
ENSSDUG00000018079	-	94	74.375	ENSATEG00000003250	gig2p	75	74.375	Anabas_testudineus
ENSSDUG00000018079	-	87	64.865	ENSATEG00000003204	gig2p	90	64.865	Anabas_testudineus
ENSSDUG00000018079	-	69	59.483	ENSACLG00000019044	gig2g	80	59.483	Astatotilapia_calliptera
ENSSDUG00000018079	-	87	71.622	ENSACLG00000006461	-	67	71.622	Astatotilapia_calliptera
ENSSDUG00000018079	-	86	50.000	ENSAMXG00000016000	-	95	50.000	Astyanax_mexicanus
ENSSDUG00000018079	-	85	54.225	ENSAMXG00000025547	gig2o	67	54.225	Astyanax_mexicanus
ENSSDUG00000018079	-	76	54.331	ENSAMXG00000041087	-	83	54.331	Astyanax_mexicanus
ENSSDUG00000018079	-	80	55.224	ENSAMXG00000026110	gig2d	88	55.224	Astyanax_mexicanus
ENSSDUG00000018079	-	70	62.712	ENSAMXG00000043196	-	82	62.712	Astyanax_mexicanus
ENSSDUG00000018079	-	76	57.480	ENSAMXG00000032512	gig2d	81	57.480	Astyanax_mexicanus
ENSSDUG00000018079	-	87	48.630	ENSAMXG00000026111	-	65	48.630	Astyanax_mexicanus
ENSSDUG00000018079	-	76	52.756	ENSAMXG00000026038	-	87	52.756	Astyanax_mexicanus
ENSSDUG00000018079	-	86	62.069	ENSAMXG00000025187	gig2p	66	62.069	Astyanax_mexicanus
ENSSDUG00000018079	-	95	57.724	ENSAMXG00000004144	-	91	57.724	Astyanax_mexicanus
ENSSDUG00000018079	-	68	61.207	ENSAMXG00000030672	-	79	61.207	Astyanax_mexicanus
ENSSDUG00000018079	-	86	73.510	ENSCVAG00000006821	gig2p	90	73.510	Cyprinodon_variegatus
ENSSDUG00000018079	-	69	56.034	ENSCVAG00000003734	-	84	56.034	Cyprinodon_variegatus
ENSSDUG00000018079	-	90	67.974	ENSCVAG00000006837	gig2p	74	67.974	Cyprinodon_variegatus
ENSSDUG00000018079	-	70	61.864	ENSCVAG00000003718	-	77	61.864	Cyprinodon_variegatus
ENSSDUG00000018079	-	93	60.510	ENSDARG00000088260	gig2p	71	60.510	Danio_rerio
ENSSDUG00000018079	-	76	53.543	ENSDARG00000098463	gig2g	81	53.543	Danio_rerio
ENSSDUG00000018079	-	76	54.331	ENSDARG00000098772	gig2d	82	54.331	Danio_rerio
ENSSDUG00000018079	-	76	55.906	ENSDARG00000091730	gig2l	100	60.000	Danio_rerio
ENSSDUG00000018079	-	77	52.308	ENSDARG00000069769	gig2j	83	52.308	Danio_rerio
ENSSDUG00000018079	-	76	53.543	ENSDARG00000103444	gig2h	81	53.543	Danio_rerio
ENSSDUG00000018079	-	80	57.037	ENSDARG00000099735	gig2f	85	57.037	Danio_rerio
ENSSDUG00000018079	-	93	55.396	ENSDARG00000075757	gig2e	93	55.396	Danio_rerio
ENSSDUG00000018079	-	77	55.385	ENSDARG00000099325	gig2i	81	55.385	Danio_rerio
ENSSDUG00000018079	-	86	50.000	ENSDARG00000086903	gig2o	66	50.000	Danio_rerio
ENSSDUG00000018079	-	85	52.113	ENSELUG00000017166	gig2o	65	52.113	Esox_lucius
ENSSDUG00000018079	-	90	69.935	ENSFHEG00000017712	-	63	69.935	Fundulus_heteroclitus
ENSSDUG00000018079	-	90	79.605	ENSFHEG00000017724	gig2p	68	79.605	Fundulus_heteroclitus
ENSSDUG00000018079	-	89	67.550	ENSGAFG00000009440	gig2p	93	67.550	Gambusia_affinis
ENSSDUG00000018079	-	87	80.952	ENSGAFG00000009453	gig2p	95	80.952	Gambusia_affinis
ENSSDUG00000018079	-	52	85.057	ENSGACG00000010431	gig2p	100	85.057	Gasterosteus_aculeatus
ENSSDUG00000018079	-	75	62.698	ENSHBUG00000018939	-	83	62.698	Haplochromis_burtoni
ENSSDUG00000018079	-	99	75.595	ENSHBUG00000010491	gig2p	72	75.595	Haplochromis_burtoni
ENSSDUG00000018079	-	87	71.622	ENSHBUG00000010473	-	85	71.622	Haplochromis_burtoni
ENSSDUG00000018079	-	75	54.762	ENSHBUG00000019410	-	88	54.762	Haplochromis_burtoni
ENSSDUG00000018079	-	70	56.780	ENSIPUG00000007003	-	87	56.780	Ictalurus_punctatus
ENSSDUG00000018079	-	86	58.268	ENSIPUG00000001510	-	92	58.268	Ictalurus_punctatus
ENSSDUG00000018079	-	69	61.538	ENSIPUG00000000101	-	77	61.538	Ictalurus_punctatus
ENSSDUG00000018079	-	87	49.315	ENSIPUG00000001531	-	65	49.315	Ictalurus_punctatus
ENSSDUG00000018079	-	86	50.345	ENSIPUG00000009280	gig2o	59	50.345	Ictalurus_punctatus
ENSSDUG00000018079	-	70	55.932	ENSIPUG00000007035	-	69	55.932	Ictalurus_punctatus
ENSSDUG00000018079	-	89	63.087	ENSIPUG00000022554	gig2p	67	63.087	Ictalurus_punctatus
ENSSDUG00000018079	-	76	53.488	ENSIPUG00000005433	-	83	51.449	Ictalurus_punctatus
ENSSDUG00000018079	-	98	66.467	ENSKMAG00000007923	-	74	66.467	Kryptolebias_marmoratus
ENSSDUG00000018079	-	86	80.690	ENSKMAG00000007907	gig2p	65	80.690	Kryptolebias_marmoratus
ENSSDUG00000018079	-	86	82.759	ENSLBEG00000018778	gig2p	69	82.759	Labrus_bergylta
ENSSDUG00000018079	-	88	67.114	ENSLBEG00000018765	-	67	67.114	Labrus_bergylta
ENSSDUG00000018079	-	94	58.861	ENSLACG00000015882	gig2p	73	58.861	Latimeria_chalumnae
ENSSDUG00000018079	-	76	60.938	ENSLACG00000000239	-	79	60.938	Latimeria_chalumnae
ENSSDUG00000018079	-	87	51.370	ENSLACG00000018888	-	65	51.370	Latimeria_chalumnae
ENSSDUG00000018079	-	89	59.843	ENSLACG00000015833	-	90	59.843	Latimeria_chalumnae
ENSSDUG00000018079	-	91	49.020	ENSLOCG00000005879	-	72	49.020	Lepisosteus_oculatus
ENSSDUG00000018079	-	85	58.268	ENSLOCG00000005897	gig2e	58	58.268	Lepisosteus_oculatus
ENSSDUG00000018079	-	93	69.182	ENSMAMG00000011285	gig2p	72	69.182	Mastacembelus_armatus
ENSSDUG00000018079	-	87	72.973	ENSMZEG00005013815	-	64	72.973	Maylandia_zebra
ENSSDUG00000018079	-	73	67.213	ENSMMOG00000005597	-	55	67.213	Mola_mola
ENSSDUG00000018079	-	90	78.947	ENSMMOG00000005594	gig2p	68	78.947	Mola_mola
ENSSDUG00000018079	-	90	82.781	ENSMALG00000008417	gig2p	67	82.781	Monopterus_albus
ENSSDUG00000018079	-	80	51.852	ENSNBRG00000009049	-	83	52.239	Neolamprologus_brichardi
ENSSDUG00000018079	-	87	72.973	ENSNBRG00000000872	-	84	72.973	Neolamprologus_brichardi
ENSSDUG00000018079	-	75	59.524	ENSNBRG00000009062	-	77	59.524	Neolamprologus_brichardi
ENSSDUG00000018079	-	87	84.354	ENSNBRG00000000843	gig2p	74	84.354	Neolamprologus_brichardi
ENSSDUG00000018079	-	90	81.203	ENSONIG00000011824	gig2p	88	81.203	Oreochromis_niloticus
ENSSDUG00000018079	-	77	58.915	ENSONIG00000009460	gig2h	91	58.915	Oreochromis_niloticus
ENSSDUG00000018079	-	87	74.830	ENSORLG00000010287	gig2p	68	74.830	Oryzias_latipes
ENSSDUG00000018079	-	77	72.868	ENSORLG00000028073	-	62	72.868	Oryzias_latipes
ENSSDUG00000018079	-	87	75.510	ENSORLG00020008422	gig2p	94	75.510	Oryzias_latipes_hni
ENSSDUG00000018079	-	70	74.576	ENSORLG00020008444	-	64	74.576	Oryzias_latipes_hni
ENSSDUG00000018079	-	77	72.868	ENSORLG00015022642	-	62	72.868	Oryzias_latipes_hsok
ENSSDUG00000018079	-	76	74.016	ENSORLG00015022600	gig2p	93	74.016	Oryzias_latipes_hsok
ENSSDUG00000018079	-	81	50.617	ENSORLG00015008571	gig2g	85	50.617	Oryzias_latipes_hsok
ENSSDUG00000018079	-	83	66.187	ENSOMEG00000007340	-	79	66.187	Oryzias_melastigma
ENSSDUG00000018079	-	77	51.538	ENSOMEG00000015239	-	81	51.538	Oryzias_melastigma
ENSSDUG00000018079	-	74	53.226	ENSOMEG00000015253	-	82	53.226	Oryzias_melastigma
ENSSDUG00000018079	-	72	55.372	ENSOMEG00000013250	-	70	55.372	Oryzias_melastigma
ENSSDUG00000018079	-	86	51.724	ENSOMEG00000013589	-	84	51.724	Oryzias_melastigma
ENSSDUG00000018079	-	71	59.016	ENSPKIG00000000927	-	67	59.016	Paramormyrops_kingsleyae
ENSSDUG00000018079	-	72	58.537	ENSPKIG00000000878	-	92	58.537	Paramormyrops_kingsleyae
ENSSDUG00000018079	-	69	59.829	ENSPKIG00000014377	-	86	59.829	Paramormyrops_kingsleyae
ENSSDUG00000018079	-	68	59.483	ENSPKIG00000001665	-	78	59.483	Paramormyrops_kingsleyae
ENSSDUG00000018079	-	73	59.350	ENSPKIG00000014390	-	90	59.350	Paramormyrops_kingsleyae
ENSSDUG00000018079	-	72	57.377	ENSPKIG00000000863	-	73	57.377	Paramormyrops_kingsleyae
ENSSDUG00000018079	-	71	57.500	ENSPKIG00000003192	-	74	57.500	Paramormyrops_kingsleyae
ENSSDUG00000018079	-	79	59.055	ENSPMAG00000005660	-	89	59.055	Petromyzon_marinus
ENSSDUG00000018079	-	82	51.449	ENSPMAG00000010332	-	88	51.449	Petromyzon_marinus
ENSSDUG00000018079	-	80	59.524	ENSPFOG00000005274	gig2g	93	59.524	Poecilia_formosa
ENSSDUG00000018079	-	90	77.083	ENSPFOG00000006191	gig2p	94	77.083	Poecilia_formosa
ENSSDUG00000018079	-	76	57.480	ENSPMEG00000007652	gig2h	79	57.480	Poecilia_mexicana
ENSSDUG00000018079	-	93	64.780	ENSPMEG00000018196	-	71	64.780	Poecilia_mexicana
ENSSDUG00000018079	-	87	81.633	ENSPMEG00000018167	gig2p	69	78.947	Poecilia_mexicana
ENSSDUG00000018079	-	76	71.875	ENSPREG00000005273	-	59	71.875	Poecilia_reticulata
ENSSDUG00000018079	-	89	71.333	ENSPREG00000005283	gig2p	88	71.333	Poecilia_reticulata
ENSSDUG00000018079	-	79	62.810	ENSPNYG00000009654	-	96	62.810	Pundamilia_nyererei
ENSSDUG00000018079	-	79	57.143	ENSPNYG00000009627	-	74	57.143	Pundamilia_nyererei
ENSSDUG00000018079	-	98	66.082	ENSPNYG00000021214	-	96	66.082	Pundamilia_nyererei
ENSSDUG00000018079	-	99	75.595	ENSPNYG00000021226	gig2p	72	75.595	Pundamilia_nyererei
ENSSDUG00000018079	-	86	51.389	ENSPNAG00000012118	gig2o	68	51.389	Pygocentrus_nattereri
ENSSDUG00000018079	-	68	54.310	ENSPNAG00000021255	-	73	54.310	Pygocentrus_nattereri
ENSSDUG00000018079	-	86	65.517	ENSPNAG00000014831	gig2p	66	65.517	Pygocentrus_nattereri
ENSSDUG00000018079	-	71	57.500	ENSPNAG00000026625	-	84	57.500	Pygocentrus_nattereri
ENSSDUG00000018079	-	83	52.518	ENSPNAG00000015811	gig2d	91	52.518	Pygocentrus_nattereri
ENSSDUG00000018079	-	87	50.000	ENSPNAG00000015816	-	65	50.000	Pygocentrus_nattereri
ENSSDUG00000018079	-	84	53.191	ENSPNAG00000015845	gig2d	91	53.191	Pygocentrus_nattereri
ENSSDUG00000018079	-	71	56.198	ENSPNAG00000026634	-	90	56.198	Pygocentrus_nattereri
ENSSDUG00000018079	-	76	56.693	ENSSFOG00015005876	-	79	56.693	Scleropages_formosus
ENSSDUG00000018079	-	84	62.393	ENSSFOG00015005900	-	93	62.393	Scleropages_formosus
ENSSDUG00000018079	-	87	68.493	ENSSFOG00015009887	gig2p	66	68.493	Scleropages_formosus
ENSSDUG00000018079	-	87	54.110	ENSSFOG00015007829	gig2o	67	54.110	Scleropages_formosus
ENSSDUG00000018079	-	76	56.693	ENSSFOG00015005869	-	58	56.693	Scleropages_formosus
ENSSDUG00000018079	-	92	45.161	ENSSFOG00015005862	-	70	45.161	Scleropages_formosus
ENSSDUG00000018079	-	92	66.026	ENSSMAG00000008329	-	69	66.026	Scophthalmus_maximus
ENSSDUG00000018079	-	93	79.747	ENSSMAG00000008317	gig2p	71	79.747	Scophthalmus_maximus
ENSSDUG00000018079	-	93	71.698	ENSSLDG00000018358	gig2p	71	71.698	Seriola_lalandi_dorsalis
ENSSDUG00000018079	-	91	77.922	ENSSPAG00000005252	gig2p	80	77.922	Stegastes_partitus
ENSSDUG00000018079	-	81	72.059	ENSTRUG00000023008	gig2p	64	72.059	Takifugu_rubripes
ENSSDUG00000018079	-	89	60.317	ENSXETG00000032410	-	89	60.317	Xenopus_tropicalis
ENSSDUG00000018079	-	93	63.522	ENSXMAG00000019444	-	71	63.522	Xiphophorus_maculatus