EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000018096 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-110g7.8
Alias: sb:eu2463
Full Name: si:dkey-110g7.8
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 3628 bases
Position: chrBDQW01000262.1:206104-209731
Accession: ZDB-GENE-131121-280
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000024913	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000025373	-	3098	-	ENSSDUP00000024913	277 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000018096's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000018096's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000018096	si:dkey-110g7.8	71	38.191	ENSSDUG00000022299	-	72	38.624
ENSSDUG00000018096	si:dkey-110g7.8	69	32.836	ENSSDUG00000003691	-	80	31.959
ENSSDUG00000018096	si:dkey-110g7.8	73	31.579	ENSSDUG00000005123	-	51	31.148
ENSSDUG00000018096	si:dkey-110g7.8	67	36.979	ENSSDUG00000023286	-	60	36.216
ENSSDUG00000018096	si:dkey-110g7.8	68	33.846	ENSSDUG00000016809	-	53	33.152
ENSSDUG00000018096	si:dkey-110g7.8	69	38.191	ENSSDUG00000009231	-	75	37.895
ENSSDUG00000018096	si:dkey-110g7.8	69	38.693	ENSSDUG00000005219	-	50	38.421
ENSSDUG00000018096	si:dkey-110g7.8	61	38.068	ENSSDUG00000016612	-	83	38.068
ENSSDUG00000018096	si:dkey-110g7.8	73	31.068	ENSSDUG00000016459	-	77	31.188
ENSSDUG00000018096	si:dkey-110g7.8	73	33.493	ENSSDUG00000003711	-	68	32.673
ENSSDUG00000018096	si:dkey-110g7.8	69	30.622	ENSSDUG00000016927	-	71	31.373
ENSSDUG00000018096	si:dkey-110g7.8	67	32.105	ENSSDUG00000016791	-	65	31.522
ENSSDUG00000018096	si:dkey-110g7.8	69	36.364	ENSSDUG00000013443	-	67	35.979
ENSSDUG00000018096	si:dkey-110g7.8	75	31.754	ENSSDUG00000004552	-	84	31.863
ENSSDUG00000018096	si:dkey-110g7.8	68	32.124	ENSSDUG00000003683	-	53	31.551
ENSSDUG00000018096	si:dkey-110g7.8	67	31.606	ENSSDUG00000023239	-	55	31.720
ENSSDUG00000018096	si:dkey-110g7.8	67	38.220	ENSSDUG00000021707	-	63	38.043
ENSSDUG00000018096	si:dkey-110g7.8	77	30.876	ENSSDUG00000023540	-	85	30.882
ENSSDUG00000018096	si:dkey-110g7.8	67	31.000	ENSSDUG00000009222	-	64	30.052
ENSSDUG00000018096	si:dkey-110g7.8	69	32.487	ENSSDUG00000020772	-	66	32.487
ENSSDUG00000018096	si:dkey-110g7.8	58	34.132	ENSSDUG00000016607	-	56	33.951
ENSSDUG00000018096	si:dkey-110g7.8	68	35.897	ENSSDUG00000016605	-	65	36.126
ENSSDUG00000018096	si:dkey-110g7.8	65	37.297	ENSSDUG00000018996	-	83	37.158
ENSSDUG00000018096	si:dkey-110g7.8	80	34.667	ENSSDUG00000004973	-	82	37.566
ENSSDUG00000018096	si:dkey-110g7.8	73	32.227	ENSSDUG00000005095	-	56	31.754
ENSSDUG00000018096	si:dkey-110g7.8	69	34.359	ENSSDUG00000023839	-	63	34.043
ENSSDUG00000018096	si:dkey-110g7.8	68	31.606	ENSSDUG00000004903	-	53	31.694
ENSSDUG00000018096	si:dkey-110g7.8	68	35.052	ENSSDUG00000023613	-	56	34.043
ENSSDUG00000018096	si:dkey-110g7.8	71	31.683	ENSSDUG00000020760	-	60	31.746
ENSSDUG00000018096	si:dkey-110g7.8	72	31.452	ENSSDUG00000021006	-	76	30.357
ENSSDUG00000018096	si:dkey-110g7.8	69	30.928	ENSSDUG00000003676	-	58	30.601
ENSSDUG00000018096	si:dkey-110g7.8	68	31.606	ENSSDUG00000019892	-	50	44.231
ENSSDUG00000018096	si:dkey-110g7.8	74	32.536	ENSSDUG00000016775	-	60	32.787
ENSSDUG00000018096	si:dkey-110g7.8	68	33.333	ENSSDUG00000002104	-	57	32.620
ENSSDUG00000018096	si:dkey-110g7.8	87	35.714	ENSSDUG00000020733	-	74	35.404
ENSSDUG00000018096	si:dkey-110g7.8	68	33.679	ENSSDUG00000023838	-	66	34.574

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000018096	si:dkey-110g7.8	100	73.665	ENSELUG00000010634	si:dkey-110g7.8	94	74.377	Esox_lucius
ENSSDUG00000018096	si:dkey-110g7.8	100	92.086	ENSGMOG00000014927	si:dkey-110g7.8	100	92.086	Gadus_morhua
ENSSDUG00000018096	si:dkey-110g7.8	100	97.473	ENSGACG00000008177	si:dkey-110g7.8	100	97.473	Gasterosteus_aculeatus
ENSSDUG00000018096	si:dkey-110g7.8	91	54.331	ENSPNAG00000007053	si:dkey-110g7.8	93	52.256	Pygocentrus_nattereri
ENSSDUG00000018096	si:dkey-110g7.8	80	100.000	ENSSLDG00000020370	si:dkey-110g7.8	88	100.000	Seriola_lalandi_dorsalis