EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000018134 (Gene tree)
Gene ID: 111220751
Gene Symbol: sltm
Alias: wu:fd12b08|zgc:65985
Full Name: SAFB like transcription modulator
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 10635 bases
Position: chrBDQW01000003.1:789396-800030
Accession: 111220751
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000024969	RRM_5	PF13893.6	2.5e-08	1	1
ENSSDUP00000024969	RRM_1	PF00076.22	3e-11	1	1
ENSSDUP00000024969	SAP	PF02037.27	1.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000025429	-	4582	XM_022743970	ENSSDUP00000024969	1009 (aa)	XP_022599691	UPI000BBEE1E0

Gene Model

Click here to download ENSSDUG00000018134's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000018134's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000018134	sltm	99	49.478	ENSG00000137776	SLTM	91	70.732	Homo_sapiens
ENSSDUG00000018134	sltm	100	85.039	ENSAPOG00000012346	sltm	100	85.335	Acanthochromis_polyacanthus
ENSSDUG00000018134	sltm	95	49.853	ENSAMEG00000004537	SLTM	86	51.840	Ailuropoda_melanoleuca
ENSSDUG00000018134	sltm	100	82.231	ENSACIG00000001971	sltm	100	80.336	Amphilophus_citrinellus
ENSSDUG00000018134	sltm	100	85.644	ENSAOCG00000002747	sltm	100	85.476	Amphiprion_ocellaris
ENSSDUG00000018134	sltm	100	85.742	ENSAPEG00000012366	sltm	100	85.574	Amphiprion_percula
ENSSDUG00000018134	sltm	100	86.444	ENSATEG00000003763	sltm	100	86.149	Anabas_testudineus
ENSSDUG00000018134	sltm	95	50.893	ENSAPLG00000013025	SLTM	87	49.577	Anas_platyrhynchos
ENSSDUG00000018134	sltm	99	49.110	ENSACAG00000015120	SLTM	83	49.896	Anolis_carolinensis
ENSSDUG00000018134	sltm	99	49.383	ENSANAG00000037031	SLTM	83	50.886	Aotus_nancymaae
ENSSDUG00000018134	sltm	100	82.532	ENSACLG00000002523	sltm	100	81.293	Astatotilapia_calliptera
ENSSDUG00000018134	sltm	99	62.452	ENSAMXG00000012409	sltm	96	63.330	Astyanax_mexicanus
ENSSDUG00000018134	sltm	99	50.287	ENSBTAG00000011319	SLTM	99	51.724	Bos_taurus
ENSSDUG00000018134	sltm	99	48.908	ENSCJAG00000020395	SLTM	83	50.574	Callithrix_jacchus
ENSSDUG00000018134	sltm	99	50.578	ENSCAFG00000016586	SLTM	99	51.665	Canis_familiaris
ENSSDUG00000018134	sltm	99	50.239	ENSCAFG00020011253	SLTM	99	48.273	Canis_lupus_dingo
ENSSDUG00000018134	sltm	99	51.307	ENSCHIG00000008780	SLTM	99	51.385	Capra_hircus
ENSSDUG00000018134	sltm	95	49.411	ENSTSYG00000013581	SLTM	82	51.623	Carlito_syrichta
ENSSDUG00000018134	sltm	92	43.433	ENSCAPG00000013326	SLTM	63	55.085	Cavia_aperea
ENSSDUG00000018134	sltm	88	51.051	ENSCPOG00000026109	SLTM	75	58.305	Cavia_porcellus
ENSSDUG00000018134	sltm	99	49.383	ENSCCAG00000022982	SLTM	83	50.886	Cebus_capucinus
ENSSDUG00000018134	sltm	99	49.430	ENSCATG00000030254	SLTM	83	50.939	Cercocebus_atys
ENSSDUG00000018134	sltm	92	48.986	ENSCLAG00000007160	SLTM	80	55.151	Chinchilla_lanigera
ENSSDUG00000018134	sltm	99	49.430	ENSCSAG00000012004	SLTM	82	51.417	Chlorocebus_sabaeus
ENSSDUG00000018134	sltm	68	58.134	ENSCHOG00000001125	SLTM	78	57.701	Choloepus_hoffmanni
ENSSDUG00000018134	sltm	100	51.688	ENSCPBG00000006045	SLTM	98	55.861	Chrysemys_picta_bellii
ENSSDUG00000018134	sltm	95	48.425	ENSCANG00000043731	SLTM	87	51.204	Colobus_angolensis_palliatus
ENSSDUG00000018134	sltm	99	50.516	ENSCGRG00001022009	Sltm	83	51.301	Cricetulus_griseus_chok1gshd
ENSSDUG00000018134	sltm	96	49.757	ENSCGRG00000014806	Sltm	87	51.458	Cricetulus_griseus_crigri
ENSSDUG00000018134	sltm	97	73.568	ENSCSEG00000001618	sltm	94	72.970	Cynoglossus_semilaevis
ENSSDUG00000018134	sltm	99	65.779	ENSDARG00000052728	sltm	99	65.385	Danio_rerio
ENSSDUG00000018134	sltm	99	49.293	ENSDNOG00000002975	SLTM	82	51.207	Dasypus_novemcinctus
ENSSDUG00000018134	sltm	74	51.695	ENSDORG00000007463	Sltm	73	53.665	Dipodomys_ordii
ENSSDUG00000018134	sltm	55	43.624	ENSETEG00000008003	SLTM	87	44.828	Echinops_telfairi
ENSSDUG00000018134	sltm	99	50.000	ENSEASG00005006792	SLTM	82	52.416	Equus_asinus_asinus
ENSSDUG00000018134	sltm	99	50.000	ENSECAG00000011267	SLTM	88	52.416	Equus_caballus
ENSSDUG00000018134	sltm	86	54.111	ENSEEUG00000000580	SLTM	78	54.038	Erinaceus_europaeus
ENSSDUG00000018134	sltm	66	72.950	ENSELUG00000013388	sltm	74	66.502	Esox_lucius
ENSSDUG00000018134	sltm	99	50.573	ENSFCAG00000004826	SLTM	99	51.318	Felis_catus
ENSSDUG00000018134	sltm	95	50.397	ENSFALG00000012285	SLTM	87	49.630	Ficedula_albicollis
ENSSDUG00000018134	sltm	95	49.411	ENSFDAG00000018075	SLTM	87	51.468	Fukomys_damarensis
ENSSDUG00000018134	sltm	84	65.289	ENSFHEG00000014764	sltm	100	56.876	Fundulus_heteroclitus
ENSSDUG00000018134	sltm	74	66.199	ENSGMOG00000015455	sltm	75	65.566	Gadus_morhua
ENSSDUG00000018134	sltm	100	78.244	ENSGACG00000015814	sltm	99	77.137	Gasterosteus_aculeatus
ENSSDUG00000018134	sltm	99	52.128	ENSGAGG00000021279	SLTM	98	50.238	Gopherus_agassizii
ENSSDUG00000018134	sltm	99	49.478	ENSGGOG00000015866	SLTM	87	51.518	Gorilla_gorilla
ENSSDUG00000018134	sltm	100	82.434	ENSHBUG00000012461	sltm	100	81.195	Haplochromis_burtoni
ENSSDUG00000018134	sltm	99	49.953	ENSHGLG00000018512	-	83	50.785	Heterocephalus_glaber_female
ENSSDUG00000018134	sltm	98	43.402	ENSHGLG00000015426	-	97	42.126	Heterocephalus_glaber_female
ENSSDUG00000018134	sltm	99	44.951	ENSHGLG00100001757	-	98	45.314	Heterocephalus_glaber_male
ENSSDUG00000018134	sltm	99	46.081	ENSHGLG00100002674	-	77	50.600	Heterocephalus_glaber_male
ENSSDUG00000018134	sltm	100	59.195	ENSHCOG00000003395	sltm	77	63.001	Hippocampus_comes
ENSSDUG00000018134	sltm	99	65.517	ENSIPUG00000023201	sltm	92	65.717	Ictalurus_punctatus
ENSSDUG00000018134	sltm	95	49.951	ENSSTOG00000000584	SLTM	87	51.363	Ictidomys_tridecemlineatus
ENSSDUG00000018134	sltm	100	49.668	ENSJJAG00000006970	Sltm	85	51.301	Jaculus_jaculus
ENSSDUG00000018134	sltm	100	71.148	ENSKMAG00000007570	sltm	100	69.587	Kryptolebias_marmoratus
ENSSDUG00000018134	sltm	100	77.362	ENSLBEG00000025472	sltm	100	76.424	Labrus_bergylta
ENSSDUG00000018134	sltm	99	51.866	ENSLACG00000005234	SLTM	99	49.953	Latimeria_chalumnae
ENSSDUG00000018134	sltm	100	59.320	ENSLOCG00000013629	sltm	100	58.617	Lepisosteus_oculatus
ENSSDUG00000018134	sltm	99	50.425	ENSLAFG00000017922	SLTM	82	50.995	Loxodonta_africana
ENSSDUG00000018134	sltm	99	49.430	ENSMFAG00000033354	SLTM	83	50.939	Macaca_fascicularis
ENSSDUG00000018134	sltm	99	49.430	ENSMMUG00000022200	SLTM	91	70.732	Macaca_mulatta
ENSSDUG00000018134	sltm	99	49.240	ENSMNEG00000025105	SLTM	82	56.863	Macaca_nemestrina
ENSSDUG00000018134	sltm	99	49.335	ENSMLEG00000043355	SLTM	83	50.835	Mandrillus_leucophaeus
ENSSDUG00000018134	sltm	100	84.684	ENSMAMG00000021391	sltm	100	84.008	Mastacembelus_armatus
ENSSDUG00000018134	sltm	100	82.532	ENSMZEG00005013839	sltm	100	81.293	Maylandia_zebra
ENSSDUG00000018134	sltm	96	51.078	ENSMGAG00000005313	SLTM	85	50.160	Meleagris_gallopavo
ENSSDUG00000018134	sltm	99	50.338	ENSMAUG00000014391	Sltm	99	50.287	Mesocricetus_auratus
ENSSDUG00000018134	sltm	99	49.103	ENSMICG00000013069	SLTM	99	49.288	Microcebus_murinus
ENSSDUG00000018134	sltm	99	50.283	ENSMOCG00000012419	Sltm	83	50.886	Microtus_ochrogaster
ENSSDUG00000018134	sltm	100	76.733	ENSMMOG00000016470	sltm	100	75.468	Mola_mola
ENSSDUG00000018134	sltm	99	50.486	ENSMODG00000008794	-	77	55.709	Monodelphis_domestica
ENSSDUG00000018134	sltm	100	85.460	ENSMALG00000021474	sltm	100	84.055	Monopterus_albus
ENSSDUG00000018134	sltm	60	45.171	MGP_CAROLIEiJ_G0032404	Sltm	83	50.156	Mus_caroli
ENSSDUG00000018134	sltm	60	45.177	ENSMUSG00000032212	Sltm	99	49.715	Mus_musculus
ENSSDUG00000018134	sltm	60	44.375	MGP_PahariEiJ_G0015268	Sltm	83	50.313	Mus_pahari
ENSSDUG00000018134	sltm	60	43.125	MGP_SPRETEiJ_G0033542	Sltm	83	50.104	Mus_spretus
ENSSDUG00000018134	sltm	97	48.984	ENSMPUG00000004229	SLTM	82	51.681	Mustela_putorius_furo
ENSSDUG00000018134	sltm	96	49.467	ENSMLUG00000000742	SLTM	87	51.349	Myotis_lucifugus
ENSSDUG00000018134	sltm	99	49.257	ENSNGAG00000012328	Sltm	83	51.199	Nannospalax_galili
ENSSDUG00000018134	sltm	100	76.772	ENSNBRG00000010183	sltm	100	75.025	Neolamprologus_brichardi
ENSSDUG00000018134	sltm	99	49.430	ENSNLEG00000011440	SLTM	82	58.824	Nomascus_leucogenys
ENSSDUG00000018134	sltm	81	49.823	ENSMEUG00000015230	SLTM	81	45.445	Notamacropus_eugenii
ENSSDUG00000018134	sltm	96	47.957	ENSODEG00000017077	SLTM	80	53.444	Octodon_degus
ENSSDUG00000018134	sltm	100	82.336	ENSONIG00000005838	sltm	100	81.195	Oreochromis_niloticus
ENSSDUG00000018134	sltm	88	49.689	ENSOCUG00000003327	SLTM	70	53.625	Oryctolagus_cuniculus
ENSSDUG00000018134	sltm	100	70.553	ENSORLG00000008161	sltm	100	69.891	Oryzias_latipes
ENSSDUG00000018134	sltm	100	70.158	ENSORLG00020008903	sltm	100	69.617	Oryzias_latipes_hni
ENSSDUG00000018134	sltm	100	70.356	ENSORLG00015007103	sltm	100	69.694	Oryzias_latipes_hsok
ENSSDUG00000018134	sltm	93	71.429	ENSOMEG00000002041	sltm	98	70.544	Oryzias_melastigma
ENSSDUG00000018134	sltm	99	50.000	ENSOGAG00000011297	SLTM	83	50.991	Otolemur_garnettii
ENSSDUG00000018134	sltm	99	50.047	ENSOARG00000020844	SLTM	81	51.486	Ovis_aries
ENSSDUG00000018134	sltm	99	49.525	ENSPPAG00000029308	SLTM	82	58.824	Pan_paniscus
ENSSDUG00000018134	sltm	99	50.474	ENSPPRG00000012400	SLTM	82	51.731	Panthera_pardus
ENSSDUG00000018134	sltm	95	49.409	ENSPTIG00000021933	SLTM	82	51.522	Panthera_tigris_altaica
ENSSDUG00000018134	sltm	99	49.478	ENSPTRG00000007121	SLTM	82	58.824	Pan_troglodytes
ENSSDUG00000018134	sltm	99	48.954	ENSPANG00000017193	SLTM	84	50.939	Papio_anubis
ENSSDUG00000018134	sltm	97	66.228	ENSPKIG00000022760	sltm	100	62.959	Paramormyrops_kingsleyae
ENSSDUG00000018134	sltm	99	50.431	ENSPSIG00000005489	SLTM	82	49.947	Pelodiscus_sinensis
ENSSDUG00000018134	sltm	99	49.436	ENSPEMG00000013263	Sltm	77	54.384	Peromyscus_maniculatus_bairdii
ENSSDUG00000018134	sltm	99	52.908	ENSPCIG00000028356	SLTM	82	52.482	Phascolarctos_cinereus
ENSSDUG00000018134	sltm	100	69.299	ENSPFOG00000004372	sltm	100	66.634	Poecilia_formosa
ENSSDUG00000018134	sltm	100	69.694	ENSPLAG00000008000	sltm	100	66.535	Poecilia_latipinna
ENSSDUG00000018134	sltm	100	69.329	ENSPMEG00000006047	sltm	100	66.732	Poecilia_mexicana
ENSSDUG00000018134	sltm	100	69.329	ENSPREG00000023236	sltm	100	66.634	Poecilia_reticulata
ENSSDUG00000018134	sltm	99	48.528	ENSPPYG00000006515	SLTM	82	50.419	Pongo_abelii
ENSSDUG00000018134	sltm	99	46.555	ENSPCAG00000013482	SLTM	87	60.784	Procavia_capensis
ENSSDUG00000018134	sltm	99	50.947	ENSPCOG00000010624	SLTM	83	51.093	Propithecus_coquereli
ENSSDUG00000018134	sltm	100	82.434	ENSPNYG00000013893	sltm	100	81.195	Pundamilia_nyererei
ENSSDUG00000018134	sltm	99	65.286	ENSPNAG00000020563	sltm	98	65.911	Pygocentrus_nattereri
ENSSDUG00000018134	sltm	60	43.818	ENSRNOG00000054446	Sltm	83	50.052	Rattus_norvegicus
ENSSDUG00000018134	sltm	95	48.713	ENSRBIG00000029226	SLTM	99	50.692	Rhinopithecus_bieti
ENSSDUG00000018134	sltm	99	49.383	ENSRROG00000045301	SLTM	83	55.317	Rhinopithecus_roxellana
ENSSDUG00000018134	sltm	99	49.905	ENSSBOG00000018883	SLTM	99	50.851	Saimiri_boliviensis_boliviensis
ENSSDUG00000018134	sltm	95	52.079	ENSSHAG00000015395	SLTM	86	53.010	Sarcophilus_harrisii
ENSSDUG00000018134	sltm	100	85.039	ENSSMAG00000000355	sltm	100	85.232	Scophthalmus_maximus
ENSSDUG00000018134	sltm	100	99.306	ENSSLDG00000013907	sltm	100	99.306	Seriola_lalandi_dorsalis
ENSSDUG00000018134	sltm	100	84.466	ENSSPAG00000008130	sltm	100	84.951	Stegastes_partitus
ENSSDUG00000018134	sltm	99	50.723	ENSSSCG00000004592	SLTM	85	54.589	Sus_scrofa
ENSSDUG00000018134	sltm	92	51.376	ENSTGUG00000006017	SLTM	90	49.314	Taeniopygia_guttata
ENSSDUG00000018134	sltm	86	68.914	ENSTRUG00000017767	sltm	89	70.358	Takifugu_rubripes
ENSSDUG00000018134	sltm	99	62.154	ENSTNIG00000009334	sltm	100	63.529	Tetraodon_nigroviridis
ENSSDUG00000018134	sltm	55	41.126	ENSTBEG00000000945	SLTM	87	50.580	Tupaia_belangeri
ENSSDUG00000018134	sltm	99	49.625	ENSTTRG00000005246	SLTM	82	51.048	Tursiops_truncatus
ENSSDUG00000018134	sltm	80	54.513	ENSUAMG00000025901	SLTM	98	55.622	Ursus_americanus
ENSSDUG00000018134	sltm	96	49.659	ENSUMAG00000023678	SLTM	98	55.263	Ursus_maritimus
ENSSDUG00000018134	sltm	99	50.332	ENSVVUG00000001450	SLTM	82	51.731	Vulpes_vulpes
ENSSDUG00000018134	sltm	100	47.785	ENSXETG00000010840	sltm	100	46.831	Xenopus_tropicalis
ENSSDUG00000018134	sltm	100	70.089	ENSXMAG00000014466	sltm	100	66.930	Xiphophorus_maculatus