EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000018238 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 2378 bases
Position: chrBDQW01000319.1:718458-720835
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000025108	Exo_endo_phos	PF03372.23	9.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000025571	-	1059	-	ENSSDUP00000025108	352 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000018238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000018238's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000018238	-	94	35.152	ENSSDUG00000013762	-	75	35.152

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000018238	-	92	31.481	ENSAPOG00000010713	-	82	31.481	Acanthochromis_polyacanthus
ENSSDUG00000018238	-	91	35.802	ENSAPOG00000021898	-	67	35.802	Acanthochromis_polyacanthus
ENSSDUG00000018238	-	97	33.426	ENSAPOG00000012457	-	83	33.426	Acanthochromis_polyacanthus
ENSSDUG00000018238	-	91	33.333	ENSAPOG00000016904	-	79	33.333	Acanthochromis_polyacanthus
ENSSDUG00000018238	-	85	37.542	ENSACIG00000012844	-	72	37.542	Amphilophus_citrinellus
ENSSDUG00000018238	-	92	35.061	ENSACIG00000008906	-	72	35.061	Amphilophus_citrinellus
ENSSDUG00000018238	-	92	34.756	ENSACIG00000019184	-	80	34.756	Amphilophus_citrinellus
ENSSDUG00000018238	-	95	31.361	ENSACAG00000024977	-	66	31.361	Anolis_carolinensis
ENSSDUG00000018238	-	97	30.702	ENSACAG00000022659	-	91	30.702	Anolis_carolinensis
ENSSDUG00000018238	-	94	31.378	ENSACAG00000022781	-	72	31.378	Anolis_carolinensis
ENSSDUG00000018238	-	71	35.294	ENSACAG00000024104	-	95	35.294	Anolis_carolinensis
ENSSDUG00000018238	-	93	30.275	ENSACAG00000027158	-	65	30.275	Anolis_carolinensis
ENSSDUG00000018238	-	91	33.746	ENSACLG00000003399	-	85	33.746	Astatotilapia_calliptera
ENSSDUG00000018238	-	77	33.942	ENSACLG00000027777	-	95	33.942	Astatotilapia_calliptera
ENSSDUG00000018238	-	92	33.639	ENSACLG00000003105	-	70	33.639	Astatotilapia_calliptera
ENSSDUG00000018238	-	88	33.871	ENSACLG00000001415	-	70	33.871	Astatotilapia_calliptera
ENSSDUG00000018238	-	92	38.462	ENSACLG00000001544	-	89	38.820	Astatotilapia_calliptera
ENSSDUG00000018238	-	92	34.365	ENSACLG00000004195	-	77	34.365	Astatotilapia_calliptera
ENSSDUG00000018238	-	67	40.084	ENSACLG00000005243	-	94	40.084	Astatotilapia_calliptera
ENSSDUG00000018238	-	94	38.182	ENSACLG00000023741	-	70	38.182	Astatotilapia_calliptera
ENSSDUG00000018238	-	89	34.603	ENSCVAG00000008582	-	69	34.603	Cyprinodon_variegatus
ENSSDUG00000018238	-	98	36.842	ENSFHEG00000007794	-	79	36.842	Fundulus_heteroclitus
ENSSDUG00000018238	-	82	35.640	ENSKMAG00000002817	-	62	35.640	Kryptolebias_marmoratus
ENSSDUG00000018238	-	95	38.623	ENSLACG00000008451	-	71	38.623	Latimeria_chalumnae
ENSSDUG00000018238	-	94	37.237	ENSLACG00000013797	-	87	37.576	Latimeria_chalumnae
ENSSDUG00000018238	-	92	36.923	ENSLACG00000005942	-	74	36.923	Latimeria_chalumnae
ENSSDUG00000018238	-	92	35.385	ENSLACG00000010026	-	68	35.385	Latimeria_chalumnae
ENSSDUG00000018238	-	95	40.476	ENSLACG00000001984	-	87	40.476	Latimeria_chalumnae
ENSSDUG00000018238	-	93	34.347	ENSLACG00000004681	-	77	34.347	Latimeria_chalumnae
ENSSDUG00000018238	-	86	34.098	ENSLACG00000009787	-	93	34.098	Latimeria_chalumnae
ENSSDUG00000018238	-	83	37.415	ENSLACG00000009073	-	81	37.415	Latimeria_chalumnae
ENSSDUG00000018238	-	73	34.733	ENSLACG00000003798	-	94	38.372	Latimeria_chalumnae
ENSSDUG00000018238	-	95	38.643	ENSLACG00000002807	-	74	38.643	Latimeria_chalumnae
ENSSDUG00000018238	-	93	34.821	ENSLACG00000002295	-	92	34.821	Latimeria_chalumnae
ENSSDUG00000018238	-	94	30.448	ENSMMUG00000029743	-	89	30.448	Macaca_mulatta
ENSSDUG00000018238	-	73	31.418	ENSMMUG00000041234	-	90	31.418	Macaca_mulatta
ENSSDUG00000018238	-	84	30.769	ENSMMUG00000039873	-	98	30.769	Macaca_mulatta
ENSSDUG00000018238	-	92	34.365	ENSMZEG00005017035	-	84	34.365	Maylandia_zebra
ENSSDUG00000018238	-	92	37.309	ENSMZEG00005013453	-	90	37.309	Maylandia_zebra
ENSSDUG00000018238	-	82	31.010	ENSMZEG00005023757	-	83	31.010	Maylandia_zebra
ENSSDUG00000018238	-	59	38.863	ENSMZEG00005019175	-	90	38.863	Maylandia_zebra
ENSSDUG00000018238	-	92	34.056	ENSMZEG00005016749	-	74	34.056	Maylandia_zebra
ENSSDUG00000018238	-	81	34.266	ENSMZEG00005026934	-	98	34.266	Maylandia_zebra
ENSSDUG00000018238	-	77	33.692	ENSMZEG00005015499	-	98	33.692	Maylandia_zebra
ENSSDUG00000018238	-	82	33.681	ENSMZEG00005021840	-	68	33.681	Maylandia_zebra
ENSSDUG00000018238	-	90	30.247	ENSMMOG00000005815	-	74	30.247	Mola_mola
ENSSDUG00000018238	-	95	30.149	ENSMODG00000028148	-	68	30.149	Monodelphis_domestica
ENSSDUG00000018238	-	94	31.045	ENSMUSG00000094472	Gm21897	66	31.045	Mus_musculus
ENSSDUG00000018238	-	94	30.149	ENSMUSG00000090353	Gm17555	88	30.149	Mus_musculus
ENSSDUG00000018238	-	96	30.548	ENSMUSG00000096463	Gm21750	68	30.548	Mus_musculus
ENSSDUG00000018238	-	94	30.357	ENSMUSG00000094030	Gm21833	66	30.357	Mus_musculus
ENSSDUG00000018238	-	82	39.792	ENSNBRG00000020944	-	86	39.792	Neolamprologus_brichardi
ENSSDUG00000018238	-	97	32.945	ENSNBRG00000010546	-	87	32.945	Neolamprologus_brichardi
ENSSDUG00000018238	-	80	35.211	ENSONIG00000021276	-	98	35.211	Oreochromis_niloticus
ENSSDUG00000018238	-	58	34.466	ENSORLG00015005588	-	64	34.973	Oryzias_latipes_hsok
ENSSDUG00000018238	-	92	33.127	ENSORLG00015008034	-	73	33.127	Oryzias_latipes_hsok
ENSSDUG00000018238	-	67	32.489	ENSORLG00015009902	-	81	32.489	Oryzias_latipes_hsok
ENSSDUG00000018238	-	77	33.948	ENSOMEG00000005845	-	70	33.948	Oryzias_melastigma
ENSSDUG00000018238	-	66	30.380	ENSPANG00000033689	-	95	30.380	Papio_anubis
ENSSDUG00000018238	-	93	37.952	ENSPMGG00000010085	-	96	37.462	Periophthalmus_magnuspinnatus
ENSSDUG00000018238	-	93	34.049	ENSPLAG00000019722	-	83	34.049	Poecilia_latipinna
ENSSDUG00000018238	-	78	35.036	ENSPLAG00000014958	-	81	35.036	Poecilia_latipinna
ENSSDUG00000018238	-	91	35.093	ENSPMEG00000000053	-	82	35.093	Poecilia_mexicana
ENSSDUG00000018238	-	82	34.375	ENSPMEG00000017446	-	83	34.375	Poecilia_mexicana
ENSSDUG00000018238	-	92	35.294	ENSPNYG00000002207	-	98	35.294	Pundamilia_nyererei
ENSSDUG00000018238	-	96	36.686	ENSPNAG00000016867	-	80	36.686	Pygocentrus_nattereri
ENSSDUG00000018238	-	92	34.675	ENSSPAG00000002492	-	85	34.675	Stegastes_partitus
ENSSDUG00000018238	-	93	32.432	ENSXETG00000034095	-	74	32.432	Xenopus_tropicalis
ENSSDUG00000018238	-	93	30.699	ENSXETG00000030767	-	75	30.699	Xenopus_tropicalis
ENSSDUG00000018238	-	99	30.252	ENSXETG00000032474	-	87	30.337	Xenopus_tropicalis
ENSSDUG00000018238	-	99	31.429	ENSXETG00000031921	-	83	31.429	Xenopus_tropicalis
ENSSDUG00000018238	-	93	33.939	ENSXETG00000033395	-	94	37.063	Xenopus_tropicalis
ENSSDUG00000018238	-	92	32.722	ENSXETG00000030078	-	80	32.822	Xenopus_tropicalis
ENSSDUG00000018238	-	57	31.188	ENSXETG00000032507	-	98	31.188	Xenopus_tropicalis
ENSSDUG00000018238	-	88	32.692	ENSXETG00000033289	-	81	32.132	Xenopus_tropicalis
ENSSDUG00000018238	-	86	34.098	ENSXETG00000030050	-	82	34.098	Xenopus_tropicalis
ENSSDUG00000018238	-	93	30.514	ENSXETG00000031547	-	81	30.514	Xenopus_tropicalis
ENSSDUG00000018238	-	93	30.982	ENSXETG00000023937	-	81	30.982	Xenopus_tropicalis
ENSSDUG00000018238	-	93	32.317	ENSXETG00000002398	-	87	32.317	Xenopus_tropicalis
ENSSDUG00000018238	-	93	31.402	ENSXETG00000031893	-	79	31.024	Xenopus_tropicalis
ENSSDUG00000018238	-	93	33.232	ENSXETG00000031821	-	88	33.232	Xenopus_tropicalis
ENSSDUG00000018238	-	86	30.363	ENSXETG00000031237	-	64	30.363	Xenopus_tropicalis
ENSSDUG00000018238	-	86	33.553	ENSXETG00000031573	-	76	33.631	Xenopus_tropicalis
ENSSDUG00000018238	-	92	32.716	ENSXETG00000033090	-	80	32.716	Xenopus_tropicalis
ENSSDUG00000018238	-	92	31.611	ENSXETG00000034064	-	74	31.611	Xenopus_tropicalis
ENSSDUG00000018238	-	92	31.611	ENSXETG00000027781	-	84	31.611	Xenopus_tropicalis
ENSSDUG00000018238	-	86	30.033	ENSXETG00000033118	-	64	30.033	Xenopus_tropicalis
ENSSDUG00000018238	-	90	32.099	ENSXETG00000031405	-	67	32.099	Xenopus_tropicalis
ENSSDUG00000018238	-	65	35.217	ENSXETG00000025636	-	98	35.217	Xenopus_tropicalis
ENSSDUG00000018238	-	89	31.949	ENSXETG00000033886	-	94	31.949	Xenopus_tropicalis
ENSSDUG00000018238	-	66	35.714	ENSXETG00000033389	-	99	35.714	Xenopus_tropicalis
ENSSDUG00000018238	-	87	34.615	ENSXETG00000019951	-	80	34.615	Xenopus_tropicalis
ENSSDUG00000018238	-	94	32.628	ENSXETG00000032017	-	75	32.628	Xenopus_tropicalis
ENSSDUG00000018238	-	98	32.184	ENSXETG00000030418	-	77	32.184	Xenopus_tropicalis
ENSSDUG00000018238	-	92	30.816	ENSXETG00000033763	-	82	30.816	Xenopus_tropicalis
ENSSDUG00000018238	-	93	31.928	ENSXETG00000033765	-	74	31.928	Xenopus_tropicalis
ENSSDUG00000018238	-	93	30.581	ENSXETG00000032834	-	81	30.581	Xenopus_tropicalis
ENSSDUG00000018238	-	94	32.024	ENSXETG00000031844	-	82	32.024	Xenopus_tropicalis
ENSSDUG00000018238	-	85	33.893	ENSXETG00000032168	-	78	33.540	Xenopus_tropicalis
ENSSDUG00000018238	-	65	33.478	ENSXETG00000032255	-	99	33.478	Xenopus_tropicalis
ENSSDUG00000018238	-	94	33.333	ENSXETG00000033714	-	75	33.333	Xenopus_tropicalis
ENSSDUG00000018238	-	92	32.827	ENSXETG00000031335	-	74	32.827	Xenopus_tropicalis
ENSSDUG00000018238	-	92	30.154	ENSXETG00000030277	-	86	30.154	Xenopus_tropicalis
ENSSDUG00000018238	-	93	30.091	ENSXETG00000033292	-	81	30.091	Xenopus_tropicalis
ENSSDUG00000018238	-	91	31.366	ENSXETG00000033299	-	79	31.307	Xenopus_tropicalis
ENSSDUG00000018238	-	93	30.395	ENSXETG00000033835	-	81	30.395	Xenopus_tropicalis
ENSSDUG00000018238	-	95	31.609	ENSXETG00000034308	-	97	31.609	Xenopus_tropicalis
ENSSDUG00000018238	-	93	31.307	ENSXETG00000030293	-	80	31.307	Xenopus_tropicalis
ENSSDUG00000018238	-	91	32.099	ENSXETG00000031535	-	73	32.099	Xenopus_tropicalis
ENSSDUG00000018238	-	65	31.624	ENSXETG00000030935	-	97	31.624	Xenopus_tropicalis
ENSSDUG00000018238	-	86	30.033	ENSXETG00000031161	-	64	30.033	Xenopus_tropicalis
ENSSDUG00000018238	-	92	31.385	ENSXETG00000031835	-	82	31.385	Xenopus_tropicalis
ENSSDUG00000018238	-	93	32.622	ENSXETG00000034113	-	87	32.622	Xenopus_tropicalis
ENSSDUG00000018238	-	83	31.741	ENSXETG00000010370	-	81	31.056	Xenopus_tropicalis
ENSSDUG00000018238	-	62	33.182	ENSXETG00000034353	-	95	33.178	Xenopus_tropicalis
ENSSDUG00000018238	-	66	35.714	ENSXETG00000032028	-	99	35.714	Xenopus_tropicalis
ENSSDUG00000018238	-	85	31.438	ENSXETG00000008562	-	80	31.056	Xenopus_tropicalis
ENSSDUG00000018238	-	85	33.113	ENSXETG00000031978	-	86	32.822	Xenopus_tropicalis
ENSSDUG00000018238	-	97	30.814	ENSXETG00000030615	-	78	32.166	Xenopus_tropicalis
ENSSDUG00000018238	-	65	33.043	ENSXETG00000026017	-	98	33.043	Xenopus_tropicalis
ENSSDUG00000018238	-	99	34.091	ENSXETG00000003659	-	85	34.091	Xenopus_tropicalis
ENSSDUG00000018238	-	93	33.333	ENSXCOG00000009068	-	74	33.333	Xiphophorus_couchianus
ENSSDUG00000018238	-	94	32.934	ENSXCOG00000012940	-	86	32.934	Xiphophorus_couchianus