EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000018422 (Gene tree)
Gene ID: 111226955
Gene Symbol: rbm4.3 (1 of many)
Alias: -
Full Name: RNA-binding protein 4B-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 2002 bases
Position: chrBDQW01000167.1:2010959-2012960
Accession: 111226955
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000025375	RRM_5	PF13893.6	1.1e-10	1	2
ENSSDUP00000025375	RRM_5	PF13893.6	1.1e-10	2	2
ENSSDUP00000025375	RRM_1	PF00076.22	5.8e-26	1	2
ENSSDUP00000025375	RRM_1	PF00076.22	5.8e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000025839	-	1376	XM_022752289	ENSSDUP00000025375	340 (aa)	XP_022608010	UPI000BBEBC1F

Gene Model

Click here to download ENSSDUG00000018422's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000018422's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000018422	rbm4.3	97	38.422	ENSSDUG00000003936	-	99	41.221
ENSSDUG00000018422	rbm4.3	96	69.231	ENSSDUG00000018435	rbm4.3	97	71.893
ENSSDUG00000018422	rbm4.3	91	55.063	ENSSDUG00000003925	rbm4.1	64	56.291

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000018422	rbm4.3	100	84.302	ENSAPOG00000002991	rbm4.3	100	85.465	Acanthochromis_polyacanthus
ENSSDUG00000018422	rbm4.3	96	66.471	ENSAPOG00000002953	rbm4.3	97	71.176	Acanthochromis_polyacanthus
ENSSDUG00000018422	rbm4.3	96	62.832	ENSACIG00000021311	-	97	67.257	Amphilophus_citrinellus
ENSSDUG00000018422	rbm4.3	100	84.104	ENSACIG00000021295	rbm4.3	100	84.104	Amphilophus_citrinellus
ENSSDUG00000018422	rbm4.3	100	83.768	ENSAOCG00000007992	rbm4.3	100	85.217	Amphiprion_ocellaris
ENSSDUG00000018422	rbm4.3	96	68.639	ENSAOCG00000008015	rbm4.3	97	71.302	Amphiprion_ocellaris
ENSSDUG00000018422	rbm4.3	100	84.058	ENSAPEG00000017288	rbm4.3	100	85.507	Amphiprion_percula
ENSSDUG00000018422	rbm4.3	96	68.639	ENSAPEG00000017324	rbm4.3	97	71.302	Amphiprion_percula
ENSSDUG00000018422	rbm4.3	100	84.795	ENSATEG00000019395	rbm4.3	100	84.795	Anabas_testudineus
ENSSDUG00000018422	rbm4.3	96	68.935	ENSATEG00000019375	rbm4.3	97	71.598	Anabas_testudineus
ENSSDUG00000018422	rbm4.3	100	82.471	ENSACLG00000010642	rbm4.3	100	82.471	Astatotilapia_calliptera
ENSSDUG00000018422	rbm4.3	99	63.610	ENSACLG00000010620	-	97	67.552	Astatotilapia_calliptera
ENSSDUG00000018422	rbm4.3	53	74.444	ENSAMXG00000040224	rbm4.3	73	73.333	Astyanax_mexicanus
ENSSDUG00000018422	rbm4.3	99	63.068	ENSCSEG00000013659	rbm4.3	97	65.396	Cynoglossus_semilaevis
ENSSDUG00000018422	rbm4.3	96	63.343	ENSCVAG00000008508	rbm4.3	97	67.055	Cyprinodon_variegatus
ENSSDUG00000018422	rbm4.3	100	76.369	ENSCVAG00000008502	rbm4.3	100	77.810	Cyprinodon_variegatus
ENSSDUG00000018422	rbm4.3	95	67.164	ENSDARG00000022129	rbm4.3	99	68.571	Danio_rerio
ENSSDUG00000018422	rbm4.3	98	68.222	ENSELUG00000022168	rbm4.3	97	71.302	Esox_lucius
ENSSDUG00000018422	rbm4.3	99	66.097	ENSELUG00000022150	rbm4.3	99	66.952	Esox_lucius
ENSSDUG00000018422	rbm4.3	98	67.529	ENSELUG00000022155	rbm4.3	97	69.006	Esox_lucius
ENSSDUG00000018422	rbm4.3	100	70.904	ENSFHEG00000023096	rbm4.3	100	73.729	Fundulus_heteroclitus
ENSSDUG00000018422	rbm4.3	79	71.119	ENSFHEG00000023137	rbm4.3	87	71.119	Fundulus_heteroclitus
ENSSDUG00000018422	rbm4.3	63	76.606	ENSGMOG00000004032	rbm4.3	53	76.606	Gadus_morhua
ENSSDUG00000018422	rbm4.3	96	74.474	ENSGAFG00000001935	rbm4.3	97	72.673	Gambusia_affinis
ENSSDUG00000018422	rbm4.3	100	77.011	ENSGACG00000019980	rbm4.3	100	77.011	Gasterosteus_aculeatus
ENSSDUG00000018422	rbm4.3	99	63.610	ENSHBUG00000009020	-	97	67.552	Haplochromis_burtoni
ENSSDUG00000018422	rbm4.3	100	81.897	ENSHBUG00000009051	rbm4.3	100	81.897	Haplochromis_burtoni
ENSSDUG00000018422	rbm4.3	100	66.667	ENSHCOG00000010363	rbm4.3	94	70.238	Hippocampus_comes
ENSSDUG00000018422	rbm4.3	95	61.145	ENSHCOG00000010349	rbm4.3	96	64.201	Hippocampus_comes
ENSSDUG00000018422	rbm4.3	99	64.773	ENSIPUG00000022943	RBM4B	99	64.773	Ictalurus_punctatus
ENSSDUG00000018422	rbm4.3	99	62.139	ENSKMAG00000017468	rbm4.3	99	63.324	Kryptolebias_marmoratus
ENSSDUG00000018422	rbm4.3	100	71.591	ENSKMAG00000014541	rbm4.3	100	72.443	Kryptolebias_marmoratus
ENSSDUG00000018422	rbm4.3	56	82.632	ENSLBEG00000001025	rbm4.3	86	82.105	Labrus_bergylta
ENSSDUG00000018422	rbm4.3	96	66.077	ENSLBEG00000001071	-	97	68.732	Labrus_bergylta
ENSSDUG00000018422	rbm4.3	95	55.495	ENSLOCG00000002755	rbm4.3	99	58.311	Lepisosteus_oculatus
ENSSDUG00000018422	rbm4.3	96	68.935	ENSMAMG00000004715	-	81	71.598	Mastacembelus_armatus
ENSSDUG00000018422	rbm4.3	100	86.804	ENSMAMG00000004701	rbm4.3	100	86.804	Mastacembelus_armatus
ENSSDUG00000018422	rbm4.3	84	60.473	ENSMZEG00005028537	-	85	64.686	Maylandia_zebra
ENSSDUG00000018422	rbm4.3	100	82.471	ENSMZEG00005028540	rbm4.3	100	82.471	Maylandia_zebra
ENSSDUG00000018422	rbm4.3	85	83.276	ENSMZEG00005007441	rbm4.3	79	83.276	Maylandia_zebra
ENSSDUG00000018422	rbm4.3	96	59.882	ENSMZEG00005007417	-	97	64.307	Maylandia_zebra
ENSSDUG00000018422	rbm4.3	100	80.925	ENSMMOG00000012191	rbm4.3	100	81.792	Mola_mola
ENSSDUG00000018422	rbm4.3	92	80.831	ENSMALG00000003032	rbm4.3	95	82.680	Monopterus_albus
ENSSDUG00000018422	rbm4.3	100	82.111	ENSMALG00000015014	-	96	82.263	Monopterus_albus
ENSSDUG00000018422	rbm4.3	84	68.919	ENSMALG00000003001	rbm4.3	87	71.959	Monopterus_albus
ENSSDUG00000018422	rbm4.3	100	82.133	ENSNBRG00000012372	rbm4.3	100	82.133	Neolamprologus_brichardi
ENSSDUG00000018422	rbm4.3	99	63.610	ENSONIG00000018380	-	97	67.552	Oreochromis_niloticus
ENSSDUG00000018422	rbm4.3	100	81.481	ENSONIG00000018378	rbm4.3	100	81.481	Oreochromis_niloticus
ENSSDUG00000018422	rbm4.3	100	68.497	ENSORLG00000024749	rbm4.3	100	68.497	Oryzias_latipes
ENSSDUG00000018422	rbm4.3	96	59.538	ENSORLG00000012473	rbm4.3	97	58.960	Oryzias_latipes
ENSSDUG00000018422	rbm4.3	96	59.130	ENSORLG00000011589	rbm4.3	97	60.116	Oryzias_latipes
ENSSDUG00000018422	rbm4.3	96	58.841	ENSORLG00020012474	rbm4.3	97	59.538	Oryzias_latipes_hni
ENSSDUG00000018422	rbm4.3	100	68.895	ENSORLG00020012482	rbm4.3	100	68.895	Oryzias_latipes_hni
ENSSDUG00000018422	rbm4.3	96	59.538	ENSORLG00020012464	rbm4.3	97	58.960	Oryzias_latipes_hni
ENSSDUG00000018422	rbm4.3	96	59.538	ENSORLG00015013686	rbm4.3	97	58.960	Oryzias_latipes_hsok
ENSSDUG00000018422	rbm4.3	96	57.681	ENSORLG00015013698	rbm4.3	97	59.827	Oryzias_latipes_hsok
ENSSDUG00000018422	rbm4.3	100	69.186	ENSORLG00015013721	rbm4.3	100	69.186	Oryzias_latipes_hsok
ENSSDUG00000018422	rbm4.3	99	58.427	ENSOMEG00000005918	rbm4.3	94	62.538	Oryzias_melastigma
ENSSDUG00000018422	rbm4.3	96	56.647	ENSOMEG00000005929	rbm4.3	97	59.366	Oryzias_melastigma
ENSSDUG00000018422	rbm4.3	100	71.304	ENSOMEG00000005950	rbm4.3	100	71.594	Oryzias_melastigma
ENSSDUG00000018422	rbm4.3	93	68.788	ENSPKIG00000007001	rbm4.3	97	68.249	Paramormyrops_kingsleyae
ENSSDUG00000018422	rbm4.3	100	74.929	ENSPLAG00000006077	rbm4.3	100	74.644	Poecilia_latipinna
ENSSDUG00000018422	rbm4.3	99	63.636	ENSPLAG00000006131	rbm4.3	97	64.431	Poecilia_latipinna
ENSSDUG00000018422	rbm4.3	99	63.636	ENSPMEG00000024271	rbm4.3	97	64.723	Poecilia_mexicana
ENSSDUG00000018422	rbm4.3	96	64.327	ENSPMEG00000024263	rbm4.3	97	65.306	Poecilia_mexicana
ENSSDUG00000018422	rbm4.3	100	75.714	ENSPMEG00000024260	rbm4.3	100	75.429	Poecilia_mexicana
ENSSDUG00000018422	rbm4.3	99	62.356	ENSPREG00000002156	rbm4.3	97	61.947	Poecilia_reticulata
ENSSDUG00000018422	rbm4.3	100	74.571	ENSPREG00000002093	-	100	75.143	Poecilia_reticulata
ENSSDUG00000018422	rbm4.3	100	82.235	ENSPNYG00000018564	rbm4.3	100	82.235	Pundamilia_nyererei
ENSSDUG00000018422	rbm4.3	99	63.610	ENSPNYG00000018541	rbm4.3	97	67.552	Pundamilia_nyererei
ENSSDUG00000018422	rbm4.3	98	66.761	ENSPNAG00000013053	rbm4.3	97	66.857	Pygocentrus_nattereri
ENSSDUG00000018422	rbm4.3	98	60.335	ENSSFOG00015015563	rbm4.3	97	60.623	Scleropages_formosus
ENSSDUG00000018422	rbm4.3	96	68.437	ENSSMAG00000013644	rbm4.3	97	68.935	Scophthalmus_maximus
ENSSDUG00000018422	rbm4.3	100	81.686	ENSSMAG00000013653	rbm4.3	100	82.558	Scophthalmus_maximus
ENSSDUG00000018422	rbm4.3	100	98.824	ENSSLDG00000017182	rbm4.3	100	98.824	Seriola_lalandi_dorsalis
ENSSDUG00000018422	rbm4.3	96	69.231	ENSSLDG00000017204	rbm4.3	97	71.893	Seriola_lalandi_dorsalis
ENSSDUG00000018422	rbm4.3	99	68.678	ENSSPAG00000008062	rbm4.3	97	71.217	Stegastes_partitus
ENSSDUG00000018422	rbm4.3	100	84.840	ENSSPAG00000008041	rbm4.3	85	85.423	Stegastes_partitus
ENSSDUG00000018422	rbm4.3	100	79.070	ENSTRUG00000023874	rbm4.3	100	79.942	Takifugu_rubripes
ENSSDUG00000018422	rbm4.3	98	67.630	ENSTRUG00000020901	rbm4.3	97	66.372	Takifugu_rubripes
ENSSDUG00000018422	rbm4.3	98	65.306	ENSTNIG00000005668	rbm4.3	97	64.392	Tetraodon_nigroviridis
ENSSDUG00000018422	rbm4.3	96	63.450	ENSXCOG00000006001	rbm4.3	97	64.431	Xiphophorus_couchianus
ENSSDUG00000018422	rbm4.3	96	75.298	ENSXCOG00000005996	rbm4.3	97	75.298	Xiphophorus_couchianus
ENSSDUG00000018422	rbm4.3	96	74.852	ENSXMAG00000025173	rbm4.3	100	74.857	Xiphophorus_maculatus
ENSSDUG00000018422	rbm4.3	99	64.205	ENSXMAG00000011698	rbm4.3	97	65.015	Xiphophorus_maculatus
ENSSDUG00000018422	rbm4.3	96	63.450	ENSXMAG00000021997	rbm4.3	97	64.431	Xiphophorus_maculatus