EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000018426 (Gene tree)
Gene ID: 111228016
Gene Symbol: cnot6l
Alias: zgc:111987
Full Name: CCR4-NOT transcription complex subunit 6-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 13344 bases
Position: chrBDQW01000193.1:30246-43589
Accession: 111228016
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000025409	Exo_endo_phos	PF03372.23	2.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000025875	-	1672	XM_022753783	ENSSDUP00000025409	553 (aa)	XP_022609504	-

Gene Model

Click here to download ENSSDUG00000018426's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000018426's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000018426	cnot6l	100	74.866	ENSSDUG00000004151	cnot6b	100	74.866

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000018426	cnot6l	100	85.225	ENSG00000138767	CNOT6L	100	93.038	Homo_sapiens
ENSSDUG00000018426	cnot6l	100	96.926	ENSAPOG00000005894	cnot6l	100	96.926	Acanthochromis_polyacanthus
ENSSDUG00000018426	cnot6l	100	85.045	ENSAMEG00000005570	CNOT6L	99	85.766	Ailuropoda_melanoleuca
ENSSDUG00000018426	cnot6l	100	98.011	ENSACIG00000002515	cnot6l	100	98.011	Amphilophus_citrinellus
ENSSDUG00000018426	cnot6l	100	93.490	ENSAOCG00000006705	cnot6l	100	93.490	Amphiprion_ocellaris
ENSSDUG00000018426	cnot6l	100	91.320	ENSAPEG00000020035	cnot6l	100	91.320	Amphiprion_percula
ENSSDUG00000018426	cnot6l	100	98.553	ENSATEG00000008774	cnot6l	100	98.553	Anabas_testudineus
ENSSDUG00000018426	cnot6l	100	83.571	ENSAPLG00000003448	CNOT6L	100	84.286	Anas_platyrhynchos
ENSSDUG00000018426	cnot6l	99	84.810	ENSACAG00000012099	CNOT6L	99	84.810	Anolis_carolinensis
ENSSDUG00000018426	cnot6l	100	85.225	ENSANAG00000023917	CNOT6L	99	85.946	Aotus_nancymaae
ENSSDUG00000018426	cnot6l	100	96.926	ENSACLG00000000879	cnot6l	100	96.926	Astatotilapia_calliptera
ENSSDUG00000018426	cnot6l	100	89.873	ENSAMXG00000008943	cnot6l	98	89.873	Astyanax_mexicanus
ENSSDUG00000018426	cnot6l	100	85.225	ENSBTAG00000049571	CNOT6L	99	85.946	Bos_taurus
ENSSDUG00000018426	cnot6l	100	85.225	ENSCJAG00000014846	CNOT6L	99	85.946	Callithrix_jacchus
ENSSDUG00000018426	cnot6l	100	85.225	ENSCAFG00000008699	CNOT6L	99	85.946	Canis_familiaris
ENSSDUG00000018426	cnot6l	100	84.810	ENSCAFG00020011108	CNOT6L	100	85.533	Canis_lupus_dingo
ENSSDUG00000018426	cnot6l	100	85.225	ENSCHIG00000006297	CNOT6L	99	85.946	Capra_hircus
ENSSDUG00000018426	cnot6l	100	85.225	ENSTSYG00000009068	CNOT6L	100	85.946	Carlito_syrichta
ENSSDUG00000018426	cnot6l	86	92.105	ENSCPOG00000010337	CNOT6L	99	92.105	Cavia_porcellus
ENSSDUG00000018426	cnot6l	100	85.225	ENSCCAG00000025000	CNOT6L	99	85.946	Cebus_capucinus
ENSSDUG00000018426	cnot6l	100	85.225	ENSCATG00000029623	CNOT6L	99	85.946	Cercocebus_atys
ENSSDUG00000018426	cnot6l	100	85.405	ENSCLAG00000004598	CNOT6L	99	85.405	Chinchilla_lanigera
ENSSDUG00000018426	cnot6l	100	85.225	ENSCSAG00000004580	CNOT6L	99	85.946	Chlorocebus_sabaeus
ENSSDUG00000018426	cnot6l	74	72.603	ENSCHOG00000001108	-	69	78.082	Choloepus_hoffmanni
ENSSDUG00000018426	cnot6l	100	84.324	ENSCPBG00000019403	CNOT6L	100	85.045	Chrysemys_picta_bellii
ENSSDUG00000018426	cnot6l	100	85.225	ENSCANG00000028583	CNOT6L	99	85.946	Colobus_angolensis_palliatus
ENSSDUG00000018426	cnot6l	100	83.784	ENSCGRG00001022099	Cnot6l	100	84.505	Cricetulus_griseus_chok1gshd
ENSSDUG00000018426	cnot6l	100	83.063	ENSCGRG00000000543	Cnot6l	100	83.784	Cricetulus_griseus_crigri
ENSSDUG00000018426	cnot6l	100	92.586	ENSCSEG00000014001	cnot6l	100	92.586	Cynoglossus_semilaevis
ENSSDUG00000018426	cnot6l	75	91.367	ENSCSEG00000010395	-	98	91.367	Cynoglossus_semilaevis
ENSSDUG00000018426	cnot6l	98	97.037	ENSCVAG00000021683	cnot6l	97	97.037	Cyprinodon_variegatus
ENSSDUG00000018426	cnot6l	99	91.486	ENSDARG00000054597	cnot6l	98	91.486	Danio_rerio
ENSSDUG00000018426	cnot6l	100	76.923	ENSDNOG00000004229	CNOT6L	99	80.061	Dasypus_novemcinctus
ENSSDUG00000018426	cnot6l	100	76.577	ENSDORG00000011458	Cnot6l	100	76.577	Dipodomys_ordii
ENSSDUG00000018426	cnot6l	100	72.469	ENSEBUG00000004849	cnot6l	100	72.469	Eptatretus_burgeri
ENSSDUG00000018426	cnot6l	87	87.137	ENSEASG00005016429	CNOT6L	91	87.137	Equus_asinus_asinus
ENSSDUG00000018426	cnot6l	93	84.749	ENSECAG00000001582	CNOT6L	87	87.137	Equus_caballus
ENSSDUG00000018426	cnot6l	99	92.391	ENSELUG00000013353	cnot6l	87	92.391	Esox_lucius
ENSSDUG00000018426	cnot6l	100	85.225	ENSFCAG00000008322	CNOT6L	99	85.946	Felis_catus
ENSSDUG00000018426	cnot6l	100	85.018	ENSFALG00000008515	CNOT6L	99	85.560	Ficedula_albicollis
ENSSDUG00000018426	cnot6l	100	85.405	ENSFDAG00000007719	CNOT6L	95	85.405	Fukomys_damarensis
ENSSDUG00000018426	cnot6l	100	87.568	ENSFHEG00000012364	cnot6l	100	87.568	Fundulus_heteroclitus
ENSSDUG00000018426	cnot6l	87	81.042	ENSGMOG00000000730	cnot6l	99	81.042	Gadus_morhua
ENSSDUG00000018426	cnot6l	92	66.996	ENSGMOG00000011077	-	99	66.996	Gadus_morhua
ENSSDUG00000018426	cnot6l	100	84.116	ENSGALG00000010333	CNOT6L	90	84.838	Gallus_gallus
ENSSDUG00000018426	cnot6l	97	94.019	ENSGAFG00000006105	cnot6l	99	94.019	Gambusia_affinis
ENSSDUG00000018426	cnot6l	88	85.102	ENSGAGG00000008605	CNOT6L	94	85.102	Gopherus_agassizii
ENSSDUG00000018426	cnot6l	100	85.225	ENSGGOG00000023412	CNOT6L	98	85.946	Gorilla_gorilla
ENSSDUG00000018426	cnot6l	100	97.107	ENSHBUG00000004755	cnot6l	95	97.292	Haplochromis_burtoni
ENSSDUG00000018426	cnot6l	100	85.586	ENSHGLG00000006452	CNOT6L	100	85.586	Heterocephalus_glaber_female
ENSSDUG00000018426	cnot6l	100	85.586	ENSHGLG00100012384	CNOT6L	98	85.586	Heterocephalus_glaber_male
ENSSDUG00000018426	cnot6l	99	80.071	ENSHCOG00000009512	cnot6l	99	80.952	Hippocampus_comes
ENSSDUG00000018426	cnot6l	100	90.054	ENSIPUG00000009879	cnot6l	100	90.054	Ictalurus_punctatus
ENSSDUG00000018426	cnot6l	100	85.225	ENSSTOG00000015293	CNOT6L	100	85.946	Ictidomys_tridecemlineatus
ENSSDUG00000018426	cnot6l	100	84.505	ENSJJAG00000020583	Cnot6l	99	85.225	Jaculus_jaculus
ENSSDUG00000018426	cnot6l	100	94.756	ENSKMAG00000004165	cnot6l	100	94.756	Kryptolebias_marmoratus
ENSSDUG00000018426	cnot6l	100	92.224	ENSLBEG00000027202	cnot6l	100	92.224	Labrus_bergylta
ENSSDUG00000018426	cnot6l	100	84.505	ENSLACG00000004684	CNOT6L	100	84.505	Latimeria_chalumnae
ENSSDUG00000018426	cnot6l	100	86.618	ENSLOCG00000007420	cnot6l	92	86.618	Lepisosteus_oculatus
ENSSDUG00000018426	cnot6l	100	85.225	ENSLAFG00000011449	CNOT6L	100	84.127	Loxodonta_africana
ENSSDUG00000018426	cnot6l	100	85.225	ENSMFAG00000044296	CNOT6L	99	85.946	Macaca_fascicularis
ENSSDUG00000018426	cnot6l	100	85.225	ENSMMUG00000045609	CNOT6L	98	85.946	Macaca_mulatta
ENSSDUG00000018426	cnot6l	100	85.225	ENSMNEG00000041259	CNOT6L	100	85.946	Macaca_nemestrina
ENSSDUG00000018426	cnot6l	100	85.225	ENSMLEG00000029198	CNOT6L	98	85.946	Mandrillus_leucophaeus
ENSSDUG00000018426	cnot6l	99	97.826	ENSMAMG00000016954	cnot6l	98	97.826	Mastacembelus_armatus
ENSSDUG00000018426	cnot6l	100	96.926	ENSMZEG00005020235	cnot6l	100	96.926	Maylandia_zebra
ENSSDUG00000018426	cnot6l	100	84.116	ENSMGAG00000005144	CNOT6L	99	84.838	Meleagris_gallopavo
ENSSDUG00000018426	cnot6l	100	84.865	ENSMICG00000017026	CNOT6L	99	85.586	Microcebus_murinus
ENSSDUG00000018426	cnot6l	100	83.784	ENSMOCG00000009451	Cnot6l	99	84.505	Microtus_ochrogaster
ENSSDUG00000018426	cnot6l	100	96.926	ENSMMOG00000014621	cnot6l	100	96.926	Mola_mola
ENSSDUG00000018426	cnot6l	100	84.144	ENSMODG00000011744	CNOT6L	75	84.865	Monodelphis_domestica
ENSSDUG00000018426	cnot6l	100	96.931	ENSMALG00000006354	cnot6l	100	96.931	Monopterus_albus
ENSSDUG00000018426	cnot6l	100	83.784	MGP_CAROLIEiJ_G0027429	Cnot6l	99	86.009	Mus_caroli
ENSSDUG00000018426	cnot6l	100	83.784	ENSMUSG00000034724	Cnot6l	99	86.009	Mus_musculus
ENSSDUG00000018426	cnot6l	100	83.784	MGP_PahariEiJ_G0017207	Cnot6l	100	84.505	Mus_pahari
ENSSDUG00000018426	cnot6l	100	83.784	MGP_SPRETEiJ_G0028426	Cnot6l	100	84.505	Mus_spretus
ENSSDUG00000018426	cnot6l	95	80.529	ENSMPUG00000003895	CNOT6L	100	81.285	Mustela_putorius_furo
ENSSDUG00000018426	cnot6l	93	84.586	ENSMLUG00000000936	CNOT6L	100	85.356	Myotis_lucifugus
ENSSDUG00000018426	cnot6l	100	83.604	ENSNGAG00000019803	Cnot6l	100	84.324	Nannospalax_galili
ENSSDUG00000018426	cnot6l	90	95.783	ENSNBRG00000016345	cnot6l	81	95.783	Neolamprologus_brichardi
ENSSDUG00000018426	cnot6l	100	85.225	ENSNLEG00000028820	CNOT6L	99	85.946	Nomascus_leucogenys
ENSSDUG00000018426	cnot6l	80	70.628	ENSMEUG00000009767	-	77	71.332	Notamacropus_eugenii
ENSSDUG00000018426	cnot6l	100	85.586	ENSODEG00000004161	CNOT6L	99	85.586	Octodon_degus
ENSSDUG00000018426	cnot6l	100	96.595	ENSONIG00000013992	cnot6l	97	96.595	Oreochromis_niloticus
ENSSDUG00000018426	cnot6l	100	84.865	ENSOANG00000003561	CNOT6L	100	85.405	Ornithorhynchus_anatinus
ENSSDUG00000018426	cnot6l	100	85.225	ENSOCUG00000002497	CNOT6L	99	85.946	Oryctolagus_cuniculus
ENSSDUG00000018426	cnot6l	100	91.863	ENSORLG00000018874	cnot6l	100	91.863	Oryzias_latipes
ENSSDUG00000018426	cnot6l	100	92.224	ENSOMEG00000010026	cnot6l	100	92.224	Oryzias_melastigma
ENSSDUG00000018426	cnot6l	100	81.964	ENSOGAG00000012122	CNOT6L	100	81.250	Otolemur_garnettii
ENSSDUG00000018426	cnot6l	100	85.225	ENSOARG00000017771	CNOT6L	99	85.946	Ovis_aries
ENSSDUG00000018426	cnot6l	84	92.105	ENSPPAG00000034242	-	98	92.105	Pan_paniscus
ENSSDUG00000018426	cnot6l	100	82.342	ENSPPAG00000030178	-	100	83.063	Pan_paniscus
ENSSDUG00000018426	cnot6l	100	85.225	ENSPPRG00000008857	CNOT6L	99	85.946	Panthera_pardus
ENSSDUG00000018426	cnot6l	100	85.225	ENSPTIG00000015698	CNOT6L	99	85.946	Panthera_tigris_altaica
ENSSDUG00000018426	cnot6l	100	85.225	ENSPTRG00000016198	CNOT6L	99	85.946	Pan_troglodytes
ENSSDUG00000018426	cnot6l	84	92.105	ENSPTRG00000045291	-	99	92.105	Pan_troglodytes
ENSSDUG00000018426	cnot6l	100	85.225	ENSPANG00000007831	CNOT6L	99	85.946	Papio_anubis
ENSSDUG00000018426	cnot6l	100	90.433	ENSPKIG00000002892	cnot6l	100	90.433	Paramormyrops_kingsleyae
ENSSDUG00000018426	cnot6l	100	83.423	ENSPSIG00000016241	CNOT6L	99	84.505	Pelodiscus_sinensis
ENSSDUG00000018426	cnot6l	99	87.226	ENSPMGG00000004021	cnot6l	99	87.226	Periophthalmus_magnuspinnatus
ENSSDUG00000018426	cnot6l	100	83.784	ENSPEMG00000011554	Cnot6l	100	84.505	Peromyscus_maniculatus_bairdii
ENSSDUG00000018426	cnot6l	95	71.429	ENSPMAG00000005706	cnot6l	97	71.506	Petromyzon_marinus
ENSSDUG00000018426	cnot6l	100	83.604	ENSPCIG00000027504	-	100	84.324	Phascolarctos_cinereus
ENSSDUG00000018426	cnot6l	100	94.756	ENSPFOG00000013163	cnot6l	100	94.756	Poecilia_formosa
ENSSDUG00000018426	cnot6l	100	94.575	ENSPLAG00000019862	cnot6l	100	94.575	Poecilia_latipinna
ENSSDUG00000018426	cnot6l	100	94.575	ENSPMEG00000015834	cnot6l	100	94.575	Poecilia_mexicana
ENSSDUG00000018426	cnot6l	100	94.213	ENSPREG00000003561	cnot6l	100	94.213	Poecilia_reticulata
ENSSDUG00000018426	cnot6l	100	85.225	ENSPPYG00000014869	CNOT6L	100	85.946	Pongo_abelii
ENSSDUG00000018426	cnot6l	100	55.135	ENSPCAG00000016617	CNOT6L	81	91.892	Procavia_capensis
ENSSDUG00000018426	cnot6l	100	85.225	ENSPCOG00000014669	CNOT6L	99	85.946	Propithecus_coquereli
ENSSDUG00000018426	cnot6l	83	89.189	ENSPVAG00000002690	CNOT6L	78	89.189	Pteropus_vampyrus
ENSSDUG00000018426	cnot6l	91	94.632	ENSPNYG00000006717	cnot6l	92	94.071	Pundamilia_nyererei
ENSSDUG00000018426	cnot6l	100	90.054	ENSPNAG00000003537	cnot6l	98	90.054	Pygocentrus_nattereri
ENSSDUG00000018426	cnot6l	100	83.784	ENSRNOG00000002075	Cnot6l	100	84.505	Rattus_norvegicus
ENSSDUG00000018426	cnot6l	100	84.865	ENSRBIG00000027644	CNOT6L	99	85.586	Rhinopithecus_bieti
ENSSDUG00000018426	cnot6l	100	85.045	ENSRROG00000031003	CNOT6L	100	85.766	Rhinopithecus_roxellana
ENSSDUG00000018426	cnot6l	100	85.225	ENSSBOG00000028521	CNOT6L	100	85.946	Saimiri_boliviensis_boliviensis
ENSSDUG00000018426	cnot6l	100	84.144	ENSSHAG00000006072	CNOT6L	99	84.865	Sarcophilus_harrisii
ENSSDUG00000018426	cnot6l	100	89.873	ENSSFOG00015019044	cnot6l	100	89.873	Scleropages_formosus
ENSSDUG00000018426	cnot6l	100	93.852	ENSSMAG00000015568	cnot6l	100	93.852	Scophthalmus_maximus
ENSSDUG00000018426	cnot6l	100	99.819	ENSSLDG00000000335	cnot6l	100	99.819	Seriola_lalandi_dorsalis
ENSSDUG00000018426	cnot6l	100	84.865	ENSSPUG00000002016	CNOT6L	100	84.865	Sphenodon_punctatus
ENSSDUG00000018426	cnot6l	100	98.192	ENSSPAG00000022932	cnot6l	100	98.192	Stegastes_partitus
ENSSDUG00000018426	cnot6l	100	85.045	ENSSSCG00000008989	CNOT6L	100	85.766	Sus_scrofa
ENSSDUG00000018426	cnot6l	100	84.657	ENSTGUG00000001737	-	99	85.199	Taeniopygia_guttata
ENSSDUG00000018426	cnot6l	100	95.298	ENSTRUG00000004332	cnot6l	100	95.298	Takifugu_rubripes
ENSSDUG00000018426	cnot6l	100	93.852	ENSTNIG00000016717	cnot6l	100	93.852	Tetraodon_nigroviridis
ENSSDUG00000018426	cnot6l	87	81.743	ENSTBEG00000016519	CNOT6L	96	81.743	Tupaia_belangeri
ENSSDUG00000018426	cnot6l	87	86.722	ENSTTRG00000005606	CNOT6L	99	86.722	Tursiops_truncatus
ENSSDUG00000018426	cnot6l	100	85.045	ENSUAMG00000026982	CNOT6L	100	85.766	Ursus_americanus
ENSSDUG00000018426	cnot6l	100	85.045	ENSUMAG00000007955	CNOT6L	99	85.766	Ursus_maritimus
ENSSDUG00000018426	cnot6l	100	81.081	ENSVPAG00000010892	CNOT6L	99	81.802	Vicugna_pacos
ENSSDUG00000018426	cnot6l	100	90.237	ENSVVUG00000024858	CNOT6L	100	90.237	Vulpes_vulpes
ENSSDUG00000018426	cnot6l	100	83.604	ENSXETG00000000372	cnot6l	99	83.604	Xenopus_tropicalis
ENSSDUG00000018426	cnot6l	100	94.394	ENSXMAG00000002900	cnot6l	100	94.394	Xiphophorus_maculatus