EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000018449 (Gene tree)
Gene ID: 111231637
Gene Symbol: -
Alias: si:dkey-147l19.2
Full Name: RNA polymerase III subunit G
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 6437 bases
Position: chrBDQW01000017.1:3765930-3772366
Accession: 111231637
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000025413	RNA_pol_3_Rpc31	PF11705.8	1.7e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000025879	-	4183	XM_022758834	ENSSDUP00000025413	212 (aa)	XP_022614555	UPI000BBE39CA

Gene Model

Click here to download ENSSDUG00000018449's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03020	RNA polymerase	KEGG
sdu04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000018449's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000018449	-	100	44.444	ENSSDUG00000014360	-	100	45.374

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000018449	-	78	86.228	ENSAPOG00000011247	-	87	86.228	Acanthochromis_polyacanthus
ENSSDUG00000018449	-	100	70.233	ENSACIG00000007516	-	100	71.628	Amphilophus_citrinellus
ENSSDUG00000018449	-	100	84.112	ENSAOCG00000024467	-	100	84.112	Amphiprion_ocellaris
ENSSDUG00000018449	-	100	84.112	ENSAPEG00000016584	-	100	84.112	Amphiprion_percula
ENSSDUG00000018449	-	100	83.256	ENSATEG00000002207	-	93	82.791	Anabas_testudineus
ENSSDUG00000018449	-	100	67.593	ENSCSEG00000015309	-	100	66.667	Cynoglossus_semilaevis
ENSSDUG00000018449	-	100	79.907	ENSCVAG00000007423	-	100	79.907	Cyprinodon_variegatus
ENSSDUG00000018449	-	91	61.194	ENSGMOG00000017219	-	100	61.538	Gadus_morhua
ENSSDUG00000018449	-	100	80.841	ENSGAFG00000009490	-	100	80.841	Gambusia_affinis
ENSSDUG00000018449	-	100	71.053	ENSGACG00000010567	-	100	70.614	Gasterosteus_aculeatus
ENSSDUG00000018449	-	100	74.766	ENSHCOG00000019088	-	100	74.766	Hippocampus_comes
ENSSDUG00000018449	-	100	79.907	ENSKMAG00000007413	-	100	83.178	Kryptolebias_marmoratus
ENSSDUG00000018449	-	100	76.636	ENSLBEG00000022698	-	100	76.168	Labrus_bergylta
ENSSDUG00000018449	-	100	80.374	ENSMZEG00005013662	-	100	82.243	Maylandia_zebra
ENSSDUG00000018449	-	100	66.038	ENSMMOG00000005508	-	100	66.509	Mola_mola
ENSSDUG00000018449	-	100	76.712	ENSONIG00000011803	-	98	76.712	Oreochromis_niloticus
ENSSDUG00000018449	-	100	76.168	ENSORLG00000021873	-	94	78.505	Oryzias_latipes
ENSSDUG00000018449	-	100	78.505	ENSORLG00015022482	-	82	78.505	Oryzias_latipes_hsok
ENSSDUG00000018449	-	100	73.832	ENSOMEG00000007659	-	100	75.701	Oryzias_melastigma
ENSSDUG00000018449	-	100	65.532	ENSPFOG00000007520	-	87	79.042	Poecilia_formosa
ENSSDUG00000018449	-	100	80.374	ENSPLAG00000012172	-	100	80.374	Poecilia_latipinna
ENSSDUG00000018449	-	100	79.907	ENSPMEG00000017122	-	100	79.907	Poecilia_mexicana
ENSSDUG00000018449	-	75	75.000	ENSPREG00000005692	-	100	75.000	Poecilia_reticulata
ENSSDUG00000018449	-	77	87.273	ENSSMAG00000007987	-	76	87.273	Scophthalmus_maximus
ENSSDUG00000018449	-	100	98.585	ENSSLDG00000021071	-	100	98.585	Seriola_lalandi_dorsalis
ENSSDUG00000018449	-	100	83.645	ENSSPAG00000004432	-	100	83.645	Stegastes_partitus
ENSSDUG00000018449	-	100	75.117	ENSTRUG00000000973	-	100	74.648	Takifugu_rubripes
ENSSDUG00000018449	-	100	79.907	ENSXMAG00000023321	-	100	79.907	Xiphophorus_maculatus