EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000018532 (Gene tree)
Gene ID: 111226194
Gene Symbol: wdr43
Alias: kiaa0007l|un-named hi821a|unm hi821a|wdr43l|wu:fb83h12|wu:fc13e01|zgc:110501
Full Name: WD repeat domain 43
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 15530 bases
Position: chrBDQW01000149.1:19318177-19333706
Accession: 111226194
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000025565	Utp12	PF04003.12	4.2e-21	1	1
ENSSDUP00000025596	Utp12	PF04003.12	2.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000026032	-	4312	XM_022751303	ENSSDUP00000025565	653 (aa)	XP_022607024	UPI000BBF02C9
ENSSDUT00000026062	-	1899	-	ENSSDUP00000025596	632 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000018532's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000018532's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000018532	wdr43	100	52.855	ENSG00000163811	WDR43	100	57.754	Homo_sapiens
ENSSDUG00000018532	wdr43	99	91.667	ENSAPOG00000020303	wdr43	99	93.740	Acanthochromis_polyacanthus
ENSSDUG00000018532	wdr43	98	52.616	ENSAMEG00000005150	WDR43	94	53.997	Ailuropoda_melanoleuca
ENSSDUG00000018532	wdr43	99	89.441	ENSACIG00000010675	wdr43	99	89.130	Amphilophus_citrinellus
ENSSDUG00000018532	wdr43	93	93.081	ENSAOCG00000006818	wdr43	96	93.081	Amphiprion_ocellaris
ENSSDUG00000018532	wdr43	99	90.586	ENSAPEG00000000552	wdr43	99	90.586	Amphiprion_percula
ENSSDUG00000018532	wdr43	99	90.698	ENSATEG00000010805	wdr43	99	91.473	Anabas_testudineus
ENSSDUG00000018532	wdr43	88	56.324	ENSAPLG00000014314	WDR43	93	57.885	Anas_platyrhynchos
ENSSDUG00000018532	wdr43	88	58.010	ENSACAG00000009264	WDR43	88	57.282	Anolis_carolinensis
ENSSDUG00000018532	wdr43	100	52.778	ENSANAG00000035736	WDR43	92	55.644	Aotus_nancymaae
ENSSDUG00000018532	wdr43	99	92.081	ENSACLG00000025675	wdr43	99	91.615	Astatotilapia_calliptera
ENSSDUG00000018532	wdr43	100	70.441	ENSAMXG00000018623	wdr43	92	72.640	Astyanax_mexicanus
ENSSDUG00000018532	wdr43	100	50.000	ENSBTAG00000018196	WDR43	99	50.073	Bos_taurus
ENSSDUG00000018532	wdr43	100	52.924	ENSCJAG00000008946	WDR43	92	55.485	Callithrix_jacchus
ENSSDUG00000018532	wdr43	100	52.111	ENSCAFG00000005253	WDR43	91	54.690	Canis_familiaris
ENSSDUG00000018532	wdr43	88	55.178	ENSCAFG00020024035	WDR43	85	54.386	Canis_lupus_dingo
ENSSDUG00000018532	wdr43	100	52.685	ENSCHIG00000006001	WDR43	99	50.219	Capra_hircus
ENSSDUG00000018532	wdr43	89	53.746	ENSTSYG00000006448	WDR43	90	55.495	Carlito_syrichta
ENSSDUG00000018532	wdr43	89	44.558	ENSCAPG00000014276	WDR43	91	45.756	Cavia_aperea
ENSSDUG00000018532	wdr43	100	52.778	ENSCCAG00000028533	WDR43	92	54.690	Cebus_capucinus
ENSSDUG00000018532	wdr43	100	52.485	ENSCATG00000031005	WDR43	92	55.167	Cercocebus_atys
ENSSDUG00000018532	wdr43	100	52.269	ENSCLAG00000011898	WDR43	92	54.921	Chinchilla_lanigera
ENSSDUG00000018532	wdr43	73	51.093	ENSCSAG00000010665	WDR43	89	54.018	Chlorocebus_sabaeus
ENSSDUG00000018532	wdr43	98	51.874	ENSCHOG00000013830	WDR43	94	50.000	Choloepus_hoffmanni
ENSSDUG00000018532	wdr43	99	56.176	ENSCPBG00000000374	WDR43	99	51.709	Chrysemys_picta_bellii
ENSSDUG00000018532	wdr43	100	51.026	ENSCANG00000033059	WDR43	91	52.632	Colobus_angolensis_palliatus
ENSSDUG00000018532	wdr43	100	52.409	ENSCGRG00001023204	Wdr43	91	54.531	Cricetulus_griseus_chok1gshd
ENSSDUG00000018532	wdr43	90	52.209	ENSCGRG00000005070	Wdr43	89	54.496	Cricetulus_griseus_crigri
ENSSDUG00000018532	wdr43	99	84.544	ENSCSEG00000016372	wdr43	98	86.154	Cynoglossus_semilaevis
ENSSDUG00000018532	wdr43	99	65.705	ENSCVAG00000016604	wdr43	98	65.815	Cyprinodon_variegatus
ENSSDUG00000018532	wdr43	100	71.298	ENSDARG00000077264	wdr43	99	71.053	Danio_rerio
ENSSDUG00000018532	wdr43	100	51.977	ENSDNOG00000018841	WDR43	92	54.849	Dasypus_novemcinctus
ENSSDUG00000018532	wdr43	100	50.657	ENSDORG00000000255	Wdr43	91	52.540	Dipodomys_ordii
ENSSDUG00000018532	wdr43	72	63.636	ENSETEG00000004853	WDR43	62	62.937	Echinops_telfairi
ENSSDUG00000018532	wdr43	89	43.328	ENSEBUG00000016586	wdr43	90	43.045	Eptatretus_burgeri
ENSSDUG00000018532	wdr43	100	52.762	ENSEASG00005009046	WDR43	91	54.762	Equus_asinus_asinus
ENSSDUG00000018532	wdr43	100	49.125	ENSECAG00000023777	WDR43	90	50.955	Equus_caballus
ENSSDUG00000018532	wdr43	86	56.338	ENSEEUG00000006044	WDR43	74	56.338	Erinaceus_europaeus
ENSSDUG00000018532	wdr43	100	80.551	ENSELUG00000019806	wdr43	94	80.590	Esox_lucius
ENSSDUG00000018532	wdr43	98	53.566	ENSFCAG00000018872	WDR43	89	54.992	Felis_catus
ENSSDUG00000018532	wdr43	88	55.499	ENSFALG00000011213	WDR43	94	57.451	Ficedula_albicollis
ENSSDUG00000018532	wdr43	100	52.346	ENSFDAG00000007446	WDR43	92	54.531	Fukomys_damarensis
ENSSDUG00000018532	wdr43	99	85.736	ENSFHEG00000021863	wdr43	99	85.736	Fundulus_heteroclitus
ENSSDUG00000018532	wdr43	97	81.703	ENSGMOG00000001695	wdr43	99	80.915	Gadus_morhua
ENSSDUG00000018532	wdr43	98	54.985	ENSGALG00000032529	WDR43	94	57.006	Gallus_gallus
ENSSDUG00000018532	wdr43	99	84.938	ENSGAFG00000019525	wdr43	99	84.938	Gambusia_affinis
ENSSDUG00000018532	wdr43	98	87.539	ENSGACG00000012843	wdr43	99	87.046	Gasterosteus_aculeatus
ENSSDUG00000018532	wdr43	100	53.139	ENSGGOG00000015956	WDR43	92	55.008	Gorilla_gorilla
ENSSDUG00000018532	wdr43	99	92.391	ENSHBUG00000011585	wdr43	95	91.925	Haplochromis_burtoni
ENSSDUG00000018532	wdr43	100	52.701	ENSHGLG00000006912	WDR43	91	54.372	Heterocephalus_glaber_female
ENSSDUG00000018532	wdr43	100	52.701	ENSHGLG00100007455	WDR43	91	54.372	Heterocephalus_glaber_male
ENSSDUG00000018532	wdr43	100	85.780	ENSHCOG00000001160	wdr43	99	85.736	Hippocampus_comes
ENSSDUG00000018532	wdr43	99	71.131	ENSIPUG00000015564	wdr43	99	70.890	Ictalurus_punctatus
ENSSDUG00000018532	wdr43	100	51.825	ENSSTOG00000014687	WDR43	91	54.299	Ictidomys_tridecemlineatus
ENSSDUG00000018532	wdr43	98	50.898	ENSJJAG00000016353	-	99	51.399	Jaculus_jaculus
ENSSDUG00000018532	wdr43	90	50.727	ENSJJAG00000012314	-	97	52.110	Jaculus_jaculus
ENSSDUG00000018532	wdr43	99	87.112	ENSKMAG00000009301	wdr43	99	86.801	Kryptolebias_marmoratus
ENSSDUG00000018532	wdr43	100	91.284	ENSLBEG00000022773	wdr43	99	91.318	Labrus_bergylta
ENSSDUG00000018532	wdr43	98	54.993	ENSLACG00000012425	WDR43	86	57.770	Latimeria_chalumnae
ENSSDUG00000018532	wdr43	90	54.711	ENSLAFG00000005457	WDR43	100	53.895	Loxodonta_africana
ENSSDUG00000018532	wdr43	100	52.339	ENSMFAG00000031243	WDR43	92	55.008	Macaca_fascicularis
ENSSDUG00000018532	wdr43	100	52.339	ENSMMUG00000022268	WDR43	92	55.008	Macaca_mulatta
ENSSDUG00000018532	wdr43	100	52.485	ENSMNEG00000035036	WDR43	98	54.864	Macaca_nemestrina
ENSSDUG00000018532	wdr43	90	51.634	ENSMLEG00000022852	WDR43	80	53.957	Mandrillus_leucophaeus
ENSSDUG00000018532	wdr43	99	90.278	ENSMAMG00000014056	wdr43	98	93.081	Mastacembelus_armatus
ENSSDUG00000018532	wdr43	99	91.925	ENSMZEG00005009095	wdr43	99	91.460	Maylandia_zebra
ENSSDUG00000018532	wdr43	88	55.405	ENSMGAG00000005248	WDR43	94	57.706	Meleagris_gallopavo
ENSSDUG00000018532	wdr43	100	48.625	ENSMAUG00000007339	Wdr43	91	50.877	Mesocricetus_auratus
ENSSDUG00000018532	wdr43	100	52.685	ENSMICG00000014276	WDR43	91	55.468	Microcebus_murinus
ENSSDUG00000018532	wdr43	100	52.899	ENSMOCG00000017279	Wdr43	92	54.603	Microtus_ochrogaster
ENSSDUG00000018532	wdr43	100	87.309	ENSMMOG00000004782	wdr43	99	87.442	Mola_mola
ENSSDUG00000018532	wdr43	100	52.174	ENSMODG00000015545	WDR43	89	54.723	Monodelphis_domestica
ENSSDUG00000018532	wdr43	69	86.623	ENSMALG00000007866	wdr43	98	85.022	Monopterus_albus
ENSSDUG00000018532	wdr43	100	52.838	MGP_CAROLIEiJ_G0021861	Wdr43	99	52.802	Mus_caroli
ENSSDUG00000018532	wdr43	100	53.130	ENSMUSG00000041057	Wdr43	99	52.655	Mus_musculus
ENSSDUG00000018532	wdr43	94	55.766	MGP_PahariEiJ_G0020848	Wdr43	92	55.167	Mus_pahari
ENSSDUG00000018532	wdr43	100	52.838	MGP_SPRETEiJ_G0022772	Wdr43	91	54.531	Mus_spretus
ENSSDUG00000018532	wdr43	88	56.367	ENSMPUG00000017985	WDR43	89	55.628	Mustela_putorius_furo
ENSSDUG00000018532	wdr43	100	50.512	ENSMLUG00000010666	WDR43	99	47.788	Myotis_lucifugus
ENSSDUG00000018532	wdr43	90	54.215	ENSNGAG00000004446	Wdr43	92	53.090	Nannospalax_galili
ENSSDUG00000018532	wdr43	99	92.081	ENSNBRG00000011062	wdr43	99	91.615	Neolamprologus_brichardi
ENSSDUG00000018532	wdr43	100	52.485	ENSNLEG00000015361	WDR43	92	54.690	Nomascus_leucogenys
ENSSDUG00000018532	wdr43	89	45.230	ENSOPRG00000007219	WDR43	91	46.223	Ochotona_princeps
ENSSDUG00000018532	wdr43	90	55.207	ENSODEG00000006870	WDR43	92	54.531	Octodon_degus
ENSSDUG00000018532	wdr43	99	91.796	ENSONIG00000019540	wdr43	99	91.331	Oreochromis_niloticus
ENSSDUG00000018532	wdr43	89	53.654	ENSOANG00000014467	WDR43	93	56.036	Ornithorhynchus_anatinus
ENSSDUG00000018532	wdr43	90	56.106	ENSOCUG00000003126	WDR43	90	55.943	Oryctolagus_cuniculus
ENSSDUG00000018532	wdr43	99	82.663	ENSORLG00000018236	wdr43	99	82.663	Oryzias_latipes
ENSSDUG00000018532	wdr43	99	82.508	ENSORLG00020008182	wdr43	99	82.663	Oryzias_latipes_hni
ENSSDUG00000018532	wdr43	99	82.353	ENSORLG00015005256	wdr43	99	82.198	Oryzias_latipes_hsok
ENSSDUG00000018532	wdr43	99	83.127	ENSOMEG00000009928	wdr43	90	82.972	Oryzias_melastigma
ENSSDUG00000018532	wdr43	98	52.679	ENSOGAG00000009879	WDR43	96	49.927	Otolemur_garnettii
ENSSDUG00000018532	wdr43	72	47.953	ENSOARG00000019566	WDR43	99	51.889	Ovis_aries
ENSSDUG00000018532	wdr43	89	52.467	ENSPPAG00000041978	WDR43	91	54.332	Pan_paniscus
ENSSDUG00000018532	wdr43	98	53.120	ENSPPRG00000001900	WDR43	90	55.688	Panthera_pardus
ENSSDUG00000018532	wdr43	98	52.290	ENSPTIG00000005982	WDR43	86	54.992	Panthera_tigris_altaica
ENSSDUG00000018532	wdr43	100	53.001	ENSPTRG00000011792	WDR43	92	54.690	Pan_troglodytes
ENSSDUG00000018532	wdr43	100	52.339	ENSPANG00000018846	WDR43	96	54.705	Papio_anubis
ENSSDUG00000018532	wdr43	100	71.601	ENSPKIG00000022935	wdr43	99	71.516	Paramormyrops_kingsleyae
ENSSDUG00000018532	wdr43	73	55.050	ENSPSIG00000014217	WDR43	89	56.984	Pelodiscus_sinensis
ENSSDUG00000018532	wdr43	100	81.498	ENSPMGG00000001169	wdr43	98	81.804	Periophthalmus_magnuspinnatus
ENSSDUG00000018532	wdr43	100	53.102	ENSPEMG00000021715	Wdr43	92	54.213	Peromyscus_maniculatus_bairdii
ENSSDUG00000018532	wdr43	88	49.660	ENSPMAG00000006054	wdr43	98	49.488	Petromyzon_marinus
ENSSDUG00000018532	wdr43	90	54.380	ENSPCIG00000011948	WDR43	96	54.797	Phascolarctos_cinereus
ENSSDUG00000018532	wdr43	99	84.627	ENSPFOG00000011371	wdr43	99	84.472	Poecilia_formosa
ENSSDUG00000018532	wdr43	99	84.161	ENSPLAG00000002041	wdr43	99	84.006	Poecilia_latipinna
ENSSDUG00000018532	wdr43	99	84.627	ENSPMEG00000020902	wdr43	99	85.997	Poecilia_mexicana
ENSSDUG00000018532	wdr43	99	84.317	ENSPREG00000004959	wdr43	99	84.006	Poecilia_reticulata
ENSSDUG00000018532	wdr43	98	52.994	ENSPPYG00000012526	WDR43	86	55.326	Pongo_abelii
ENSSDUG00000018532	wdr43	88	52.098	ENSPCAG00000011610	WDR43	88	50.794	Procavia_capensis
ENSSDUG00000018532	wdr43	100	52.975	ENSPCOG00000000476	WDR43	99	50.292	Propithecus_coquereli
ENSSDUG00000018532	wdr43	98	48.806	ENSPVAG00000013850	WDR43	86	50.637	Pteropus_vampyrus
ENSSDUG00000018532	wdr43	99	92.236	ENSPNYG00000023080	wdr43	99	91.770	Pundamilia_nyererei
ENSSDUG00000018532	wdr43	100	70.089	ENSPNAG00000023664	wdr43	93	73.151	Pygocentrus_nattereri
ENSSDUG00000018532	wdr43	100	53.509	ENSRNOG00000026316	Wdr43	92	54.921	Rattus_norvegicus
ENSSDUG00000018532	wdr43	100	52.339	ENSRBIG00000026670	WDR43	95	53.344	Rhinopithecus_bieti
ENSSDUG00000018532	wdr43	100	52.339	ENSRROG00000035929	WDR43	92	55.008	Rhinopithecus_roxellana
ENSSDUG00000018532	wdr43	100	53.363	ENSSBOG00000021596	WDR43	92	56.121	Saimiri_boliviensis_boliviensis
ENSSDUG00000018532	wdr43	90	54.711	ENSSHAG00000009672	WDR43	94	54.127	Sarcophilus_harrisii
ENSSDUG00000018532	wdr43	100	52.426	ENSSFOG00015004013	-	95	55.049	Scleropages_formosus
ENSSDUG00000018532	wdr43	100	71.017	ENSSFOG00015007173	wdr43	89	70.923	Scleropages_formosus
ENSSDUG00000018532	wdr43	99	89.286	ENSSMAG00000015328	wdr43	99	89.130	Scophthalmus_maximus
ENSSDUG00000018532	wdr43	95	99.034	ENSSLDG00000015626	wdr43	100	99.034	Seriola_lalandi_dorsalis
ENSSDUG00000018532	wdr43	72	58.369	ENSSARG00000013358	WDR43	78	57.028	Sorex_araneus
ENSSDUG00000018532	wdr43	99	54.235	ENSSPUG00000006260	WDR43	93	56.190	Sphenodon_punctatus
ENSSDUG00000018532	wdr43	93	92.257	ENSSPAG00000002830	wdr43	95	92.257	Stegastes_partitus
ENSSDUG00000018532	wdr43	100	52.471	ENSSSCG00000008536	WDR43	91	54.444	Sus_scrofa
ENSSDUG00000018532	wdr43	91	55.902	ENSTGUG00000005464	WDR43	94	56.149	Taeniopygia_guttata
ENSSDUG00000018532	wdr43	99	83.282	ENSTRUG00000009764	wdr43	99	83.282	Takifugu_rubripes
ENSSDUG00000018532	wdr43	99	84.235	ENSTNIG00000008907	wdr43	99	83.926	Tetraodon_nigroviridis
ENSSDUG00000018532	wdr43	79	55.744	ENSTBEG00000007577	WDR43	99	55.577	Tupaia_belangeri
ENSSDUG00000018532	wdr43	89	51.809	ENSTTRG00000008268	WDR43	76	53.971	Tursiops_truncatus
ENSSDUG00000018532	wdr43	90	54.711	ENSUAMG00000015504	WDR43	91	54.054	Ursus_americanus
ENSSDUG00000018532	wdr43	90	54.711	ENSUMAG00000020071	WDR43	91	54.054	Ursus_maritimus
ENSSDUG00000018532	wdr43	72	46.296	ENSVPAG00000001632	WDR43	60	50.376	Vicugna_pacos
ENSSDUG00000018532	wdr43	90	54.876	ENSVVUG00000002890	WDR43	99	54.545	Vulpes_vulpes
ENSSDUG00000018532	wdr43	99	82.504	ENSXCOG00000011240	wdr43	99	82.880	Xiphophorus_couchianus
ENSSDUG00000018532	wdr43	99	84.472	ENSXMAG00000018379	wdr43	99	84.472	Xiphophorus_maculatus