EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000018550 (Gene tree)
Gene ID: 111232337
Gene Symbol: -
Alias: -
Full Name: protein SON-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 15034 bases
Position: chrBDQW01000018.1:2761166-2776199
Accession: 111232337
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000025560	dsrm	PF00035.26	4.8e-12	1	1
ENSSDUP00000025582	dsrm	PF00035.26	5.1e-12	1	1
ENSSDUP00000025560	DND1_DSRM	PF14709.7	9.1e-12	1	1
ENSSDUP00000025582	DND1_DSRM	PF14709.7	9.7e-12	1	1
ENSSDUP00000025560	G-patch	PF01585.23	7.8e-12	1	1
ENSSDUP00000025582	G-patch	PF01585.23	8.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000026049	-	3765	XM_022759804	ENSSDUP00000025582	961 (aa)	XP_022615525	UPI000BBE8B91
ENSSDUT00000026027	-	3613	-	ENSSDUP00000025560	923 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000018550's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000018550's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000018550	-	100	75.726	ENSAPOG00000000559	-	100	76.008	Acanthochromis_polyacanthus
ENSSDUG00000018550	-	100	75.257	ENSAOCG00000004262	-	100	75.258	Amphiprion_ocellaris
ENSSDUG00000018550	-	100	75.051	ENSAPEG00000009136	-	100	75.052	Amphiprion_percula
ENSSDUG00000018550	-	72	84.478	ENSATEG00000012732	-	99	84.731	Anabas_testudineus
ENSSDUG00000018550	-	100	70.539	ENSACLG00000007065	-	100	69.119	Astatotilapia_calliptera
ENSSDUG00000018550	-	58	67.736	ENSAMXG00000038259	-	63	67.736	Astyanax_mexicanus
ENSSDUG00000018550	-	57	30.892	FBgn0037716	CG8273	55	33.333	Drosophila_melanogaster
ENSSDUG00000018550	-	59	69.366	ENSELUG00000003878	-	68	69.643	Esox_lucius
ENSSDUG00000018550	-	100	66.633	ENSFHEG00000019700	-	100	65.957	Fundulus_heteroclitus
ENSSDUG00000018550	-	53	48.374	ENSGALG00000052354	-	72	52.089	Gallus_gallus
ENSSDUG00000018550	-	100	67.930	ENSGAFG00000016463	-	100	67.556	Gambusia_affinis
ENSSDUG00000018550	-	100	70.238	ENSHBUG00000001964	-	100	68.757	Haplochromis_burtoni
ENSSDUG00000018550	-	100	68.325	ENSKMAG00000012003	-	100	68.534	Kryptolebias_marmoratus
ENSSDUG00000018550	-	59	89.762	ENSLBEG00000008600	-	100	75.635	Labrus_bergylta
ENSSDUG00000018550	-	99	71.505	ENSMAMG00000003082	-	100	72.281	Mastacembelus_armatus
ENSSDUG00000018550	-	100	70.643	ENSMZEG00005018999	-	100	69.223	Maylandia_zebra
ENSSDUG00000018550	-	53	45.842	ENSMGAG00000014526	-	81	50.255	Meleagris_gallopavo
ENSSDUG00000018550	-	100	58.194	ENSORLG00000027334	-	70	72.462	Oryzias_latipes
ENSSDUG00000018550	-	51	60.465	ENSPMGG00000015598	-	69	76.036	Periophthalmus_magnuspinnatus
ENSSDUG00000018550	-	100	67.729	ENSPLAG00000008338	-	100	67.009	Poecilia_latipinna
ENSSDUG00000018550	-	100	68.033	ENSPMEG00000017611	-	100	67.112	Poecilia_mexicana
ENSSDUG00000018550	-	100	67.934	ENSPREG00000017979	-	100	67.078	Poecilia_reticulata
ENSSDUG00000018550	-	65	60.563	ENSPNAG00000009991	-	64	66.314	Pygocentrus_nattereri
ENSSDUG00000018550	-	100	76.868	ENSSMAG00000000065	-	99	80.571	Scophthalmus_maximus
ENSSDUG00000018550	-	100	78.252	ENSSPAG00000014575	-	100	77.642	Stegastes_partitus
ENSSDUG00000018550	-	89	85.192	ENSTRUG00000019967	-	100	66.871	Takifugu_rubripes
ENSSDUG00000018550	-	51	46.624	ENSXETG00000014115	son	84	51.225	Xenopus_tropicalis
ENSSDUG00000018550	-	100	68.066	ENSXMAG00000025239	-	100	67.385	Xiphophorus_maculatus