EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000018584 (Gene tree)
Gene ID: 111227418
Gene Symbol: PNPT1
Alias: DFNB70|OLD35|PNPase|old-35
Full Name: polyribonucleotide nucleotidyltransferase 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 10549 bases
Position: chrBDQW01000187.1:316246-326794
Accession: 111227418
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000025605	KH_1	PF00013.29	2.3e-06	1	1
ENSSDUP00000025605	RNase_PH	PF01138.21	4.1e-42	1	2
ENSSDUP00000025605	RNase_PH	PF01138.21	4.1e-42	2	2
ENSSDUP00000025605	PNPase	PF03726.14	1.2e-08	1	1
ENSSDUP00000025605	S1	PF00575.23	5.7e-05	1	1
ENSSDUP00000025605	RNase_PH_C	PF03725.15	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000026072	PNPT1-201	4420	XM_022752879	ENSSDUP00000025605	770 (aa)	XP_022608600	UPI000BBF28DF

Gene Model

Click here to download ENSSDUG00000018584's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000018584's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000018584	PNPT1	96	79.060	ENSG00000138035	PNPT1	95	78.869	Homo_sapiens
ENSSDUG00000018584	PNPT1	99	92.588	ENSAPOG00000005581	PNPT1	99	92.588	Acanthochromis_polyacanthus
ENSSDUG00000018584	PNPT1	95	79.452	ENSAMEG00000003772	PNPT1	94	78.890	Ailuropoda_melanoleuca
ENSSDUG00000018584	PNPT1	94	91.851	ENSACIG00000010140	PNPT1	99	91.851	Amphilophus_citrinellus
ENSSDUG00000018584	PNPT1	99	92.458	ENSAOCG00000020109	PNPT1	99	92.458	Amphiprion_ocellaris
ENSSDUG00000018584	PNPT1	95	89.495	ENSAPEG00000002299	PNPT1	98	89.495	Amphiprion_percula
ENSSDUG00000018584	PNPT1	100	93.506	ENSATEG00000011164	PNPT1	100	93.506	Anabas_testudineus
ENSSDUG00000018584	PNPT1	95	78.776	ENSAPLG00000002885	PNPT1	99	78.776	Anas_platyrhynchos
ENSSDUG00000018584	PNPT1	97	79.088	ENSACAG00000003692	PNPT1	94	79.088	Anolis_carolinensis
ENSSDUG00000018584	PNPT1	95	79.372	ENSANAG00000023709	PNPT1	94	78.890	Aotus_nancymaae
ENSSDUG00000018584	PNPT1	99	91.417	ENSACLG00000024267	PNPT1	99	91.417	Astatotilapia_calliptera
ENSSDUG00000018584	PNPT1	93	83.172	ENSAMXG00000042321	PNPT1	99	83.172	Astyanax_mexicanus
ENSSDUG00000018584	PNPT1	95	78.767	ENSBTAG00000008909	PNPT1	94	78.214	Bos_taurus
ENSSDUG00000018584	PNPT1	95	42.877	WBGene00015266	BE0003N10.1	98	42.877	Caenorhabditis_elegans
ENSSDUG00000018584	PNPT1	95	79.235	ENSCJAG00000009740	PNPT1	94	78.755	Callithrix_jacchus
ENSSDUG00000018584	PNPT1	95	74.321	ENSCAFG00000002891	PNPT1	96	72.266	Canis_familiaris
ENSSDUG00000018584	PNPT1	95	79.973	ENSCAFG00020026841	PNPT1	96	77.661	Canis_lupus_dingo
ENSSDUG00000018584	PNPT1	95	75.753	ENSCHIG00000025034	PNPT1	94	75.441	Capra_hircus
ENSSDUG00000018584	PNPT1	98	77.748	ENSTSYG00000006536	PNPT1	97	77.094	Carlito_syrichta
ENSSDUG00000018584	PNPT1	93	62.361	ENSCAPG00000013300	PNPT1	99	62.003	Cavia_aperea
ENSSDUG00000018584	PNPT1	95	78.747	ENSCPOG00000011008	PNPT1	95	78.197	Cavia_porcellus
ENSSDUG00000018584	PNPT1	98	77.630	ENSCCAG00000037909	PNPT1	97	76.974	Cebus_capucinus
ENSSDUG00000018584	PNPT1	94	61.019	ENSCATG00000036442	-	94	61.019	Cercocebus_atys
ENSSDUG00000018584	PNPT1	99	76.316	ENSCATG00000031551	PNPT1	97	76.316	Cercocebus_atys
ENSSDUG00000018584	PNPT1	95	79.837	ENSCLAG00000006240	PNPT1	95	79.139	Chinchilla_lanigera
ENSSDUG00000018584	PNPT1	99	77.661	ENSCSAG00000014324	PNPT1	97	77.661	Chlorocebus_sabaeus
ENSSDUG00000018584	PNPT1	93	68.846	ENSCHOG00000007360	PNPT1	99	68.269	Choloepus_hoffmanni
ENSSDUG00000018584	PNPT1	95	80.926	ENSCPBG00000020856	PNPT1	92	80.926	Chrysemys_picta_bellii
ENSSDUG00000018584	PNPT1	98	63.046	ENSCANG00000028159	-	96	63.046	Colobus_angolensis_palliatus
ENSSDUG00000018584	PNPT1	99	77.895	ENSCANG00000034019	PNPT1	97	77.895	Colobus_angolensis_palliatus
ENSSDUG00000018584	PNPT1	98	76.698	ENSCGRG00001012245	Pnpt1	96	76.053	Cricetulus_griseus_chok1gshd
ENSSDUG00000018584	PNPT1	98	76.153	ENSCGRG00000007624	Pnpt1	97	75.718	Cricetulus_griseus_crigri
ENSSDUG00000018584	PNPT1	93	87.115	ENSCSEG00000000809	PNPT1	99	87.115	Cynoglossus_semilaevis
ENSSDUG00000018584	PNPT1	83	90.909	ENSCVAG00000010037	PNPT1	99	90.909	Cyprinodon_variegatus
ENSSDUG00000018584	PNPT1	98	77.778	ENSDNOG00000046753	PNPT1	97	77.124	Dasypus_novemcinctus
ENSSDUG00000018584	PNPT1	95	79.048	ENSDORG00000011409	Pnpt1	95	78.495	Dipodomys_ordii
ENSSDUG00000018584	PNPT1	95	56.267	FBgn0039846	PNPase	95	56.267	Drosophila_melanogaster
ENSSDUG00000018584	PNPT1	95	59.726	ENSETEG00000001582	-	94	59.030	Echinops_telfairi
ENSSDUG00000018584	PNPT1	94	53.022	ENSEBUG00000010305	PNPT1	95	52.885	Eptatretus_burgeri
ENSSDUG00000018584	PNPT1	95	79.645	ENSEASG00005001974	PNPT1	94	79.082	Equus_asinus_asinus
ENSSDUG00000018584	PNPT1	95	79.781	ENSECAG00000020058	PNPT1	98	79.267	Equus_caballus
ENSSDUG00000018584	PNPT1	98	68.833	ENSEEUG00000015610	PNPT1	97	68.414	Erinaceus_europaeus
ENSSDUG00000018584	PNPT1	99	86.589	ENSELUG00000004795	PNPT1	99	86.589	Esox_lucius
ENSSDUG00000018584	PNPT1	95	79.781	ENSFCAG00000013236	PNPT1	94	79.217	Felis_catus
ENSSDUG00000018584	PNPT1	94	79.092	ENSFALG00000011214	PNPT1	99	79.092	Ficedula_albicollis
ENSSDUG00000018584	PNPT1	98	76.354	ENSFDAG00000017446	PNPT1	97	76.354	Fukomys_damarensis
ENSSDUG00000018584	PNPT1	99	89.207	ENSFHEG00000006495	PNPT1	99	90.411	Fundulus_heteroclitus
ENSSDUG00000018584	PNPT1	99	86.623	ENSGMOG00000006805	PNPT1	100	86.623	Gadus_morhua
ENSSDUG00000018584	PNPT1	96	77.310	ENSGALG00000043545	PNPT1	92	77.310	Gallus_gallus
ENSSDUG00000018584	PNPT1	99	90.377	ENSGAFG00000019681	PNPT1	99	90.377	Gambusia_affinis
ENSSDUG00000018584	PNPT1	100	90.544	ENSGACG00000010840	PNPT1	100	90.544	Gasterosteus_aculeatus
ENSSDUG00000018584	PNPT1	96	79.195	ENSGGOG00000006867	PNPT1	95	79.195	Gorilla_gorilla
ENSSDUG00000018584	PNPT1	95	66.349	ENSGGOG00000041496	-	95	65.726	Gorilla_gorilla
ENSSDUG00000018584	PNPT1	99	91.157	ENSHBUG00000013041	PNPT1	99	91.157	Haplochromis_burtoni
ENSSDUG00000018584	PNPT1	84	74.268	ENSHGLG00000010054	-	90	74.268	Heterocephalus_glaber_female
ENSSDUG00000018584	PNPT1	97	78.179	ENSHGLG00000007480	PNPT1	96	77.297	Heterocephalus_glaber_female
ENSSDUG00000018584	PNPT1	94	69.722	ENSHGLG00100007397	-	96	68.980	Heterocephalus_glaber_male
ENSSDUG00000018584	PNPT1	97	78.179	ENSHGLG00100010920	PNPT1	96	77.297	Heterocephalus_glaber_male
ENSSDUG00000018584	PNPT1	95	74.523	ENSHCOG00000002817	PNPT1	99	74.523	Hippocampus_comes
ENSSDUG00000018584	PNPT1	95	83.402	ENSIPUG00000014624	PNPT1	99	83.402	Ictalurus_punctatus
ENSSDUG00000018584	PNPT1	99	77.457	ENSSTOG00000006304	PNPT1	97	77.457	Ictidomys_tridecemlineatus
ENSSDUG00000018584	PNPT1	95	78.747	ENSJJAG00000019227	Pnpt1	95	78.062	Jaculus_jaculus
ENSSDUG00000018584	PNPT1	99	87.906	ENSKMAG00000017389	PNPT1	99	87.906	Kryptolebias_marmoratus
ENSSDUG00000018584	PNPT1	100	91.039	ENSLBEG00000027692	PNPT1	100	91.039	Labrus_bergylta
ENSSDUG00000018584	PNPT1	91	81.375	ENSLACG00000011059	PNPT1	99	81.375	Latimeria_chalumnae
ENSSDUG00000018584	PNPT1	99	81.534	ENSLOCG00000015375	PNPT1	96	81.534	Lepisosteus_oculatus
ENSSDUG00000018584	PNPT1	95	75.341	ENSLAFG00000021462	PNPT1	94	74.899	Loxodonta_africana
ENSSDUG00000018584	PNPT1	99	77.632	ENSMFAG00000001927	PNPT1	97	77.632	Macaca_fascicularis
ENSSDUG00000018584	PNPT1	81	79.904	ENSMMUG00000007003	PNPT1	99	79.904	Macaca_mulatta
ENSSDUG00000018584	PNPT1	95	79.670	ENSMNEG00000038589	PNPT1	99	79.670	Macaca_nemestrina
ENSSDUG00000018584	PNPT1	98	57.784	ENSMLEG00000028524	-	99	57.784	Mandrillus_leucophaeus
ENSSDUG00000018584	PNPT1	99	74.346	ENSMLEG00000038706	PNPT1	97	74.346	Mandrillus_leucophaeus
ENSSDUG00000018584	PNPT1	98	85.073	ENSMAMG00000021954	PNPT1	98	85.073	Mastacembelus_armatus
ENSSDUG00000018584	PNPT1	99	91.417	ENSMZEG00005027363	PNPT1	99	91.417	Maylandia_zebra
ENSSDUG00000018584	PNPT1	95	77.049	ENSMGAG00000001952	PNPT1	99	77.049	Meleagris_gallopavo
ENSSDUG00000018584	PNPT1	95	78.581	ENSMAUG00000013652	Pnpt1	93	78.581	Mesocricetus_auratus
ENSSDUG00000018584	PNPT1	99	77.225	ENSMICG00000009369	PNPT1	97	77.225	Microcebus_murinus
ENSSDUG00000018584	PNPT1	98	76.565	ENSMOCG00000002820	Pnpt1	96	76.253	Microtus_ochrogaster
ENSSDUG00000018584	PNPT1	93	88.981	ENSMMOG00000007480	PNPT1	100	88.981	Mola_mola
ENSSDUG00000018584	PNPT1	98	76.842	ENSMODG00000001984	PNPT1	96	76.532	Monodelphis_domestica
ENSSDUG00000018584	PNPT1	100	91.558	ENSMALG00000018484	PNPT1	100	91.558	Monopterus_albus
ENSSDUG00000018584	PNPT1	96	77.463	MGP_CAROLIEiJ_G0016153	Pnpt1	95	77.254	Mus_caroli
ENSSDUG00000018584	PNPT1	97	77.151	ENSMUSG00000020464	Pnpt1	95	77.151	Mus_musculus
ENSSDUG00000018584	PNPT1	98	76.964	MGP_PahariEiJ_G0016737	Pnpt1	96	76.316	Mus_pahari
ENSSDUG00000018584	PNPT1	96	77.254	MGP_SPRETEiJ_G0016996	Pnpt1	99	77.254	Mus_spretus
ENSSDUG00000018584	PNPT1	95	79.754	ENSMPUG00000002353	PNPT1	94	79.189	Mustela_putorius_furo
ENSSDUG00000018584	PNPT1	95	79.155	ENSMLUG00000003886	PNPT1	97	76.923	Myotis_lucifugus
ENSSDUG00000018584	PNPT1	95	78.610	ENSNGAG00000020856	-	95	78.197	Nannospalax_galili
ENSSDUG00000018584	PNPT1	71	89.154	ENSNBRG00000012517	PNPT1	87	89.154	Neolamprologus_brichardi
ENSSDUG00000018584	PNPT1	89	73.958	ENSNLEG00000003327	-	94	73.958	Nomascus_leucogenys
ENSSDUG00000018584	PNPT1	98	75.066	ENSNLEG00000009354	PNPT1	97	74.868	Nomascus_leucogenys
ENSSDUG00000018584	PNPT1	96	76.287	ENSOPRG00000010232	-	94	76.287	Ochotona_princeps
ENSSDUG00000018584	PNPT1	97	79.039	ENSODEG00000012137	PNPT1	96	78.364	Octodon_degus
ENSSDUG00000018584	PNPT1	98	91.622	ENSONIG00000000983	PNPT1	96	91.622	Oreochromis_niloticus
ENSSDUG00000018584	PNPT1	91	80.342	ENSOANG00000011178	PNPT1	99	80.342	Ornithorhynchus_anatinus
ENSSDUG00000018584	PNPT1	98	77.807	ENSOCUG00000006889	PNPT1	97	77.154	Oryctolagus_cuniculus
ENSSDUG00000018584	PNPT1	100	89.091	ENSORLG00000004335	PNPT1	96	89.398	Oryzias_latipes
ENSSDUG00000018584	PNPT1	100	89.091	ENSORLG00015018951	PNPT1	99	90.041	Oryzias_latipes_hsok
ENSSDUG00000018584	PNPT1	99	75.195	ENSOGAG00000009840	PNPT1	97	75.195	Otolemur_garnettii
ENSSDUG00000018584	PNPT1	95	78.933	ENSOARG00000002164	PNPT1	94	78.378	Ovis_aries
ENSSDUG00000018584	PNPT1	86	77.603	ENSPPAG00000024705	PNPT1	94	77.603	Pan_paniscus
ENSSDUG00000018584	PNPT1	99	62.681	ENSPPAG00000040514	-	96	62.681	Pan_paniscus
ENSSDUG00000018584	PNPT1	95	79.973	ENSPPRG00000001366	PNPT1	94	79.217	Panthera_pardus
ENSSDUG00000018584	PNPT1	95	80.110	ENSPTIG00000014915	PNPT1	95	79.139	Panthera_tigris_altaica
ENSSDUG00000018584	PNPT1	96	79.195	ENSPTRG00000011934	PNPT1	95	79.195	Pan_troglodytes
ENSSDUG00000018584	PNPT1	99	62.549	ENSPTRG00000051411	-	98	62.549	Pan_troglodytes
ENSSDUG00000018584	PNPT1	99	77.749	ENSPANG00000022846	PNPT1	97	77.749	Papio_anubis
ENSSDUG00000018584	PNPT1	99	82.092	ENSPKIG00000021612	PNPT1	99	81.103	Paramormyrops_kingsleyae
ENSSDUG00000018584	PNPT1	96	80.217	ENSPSIG00000013120	PNPT1	96	80.217	Pelodiscus_sinensis
ENSSDUG00000018584	PNPT1	96	78.197	ENSPEMG00000004284	Pnpt1	94	78.197	Peromyscus_maniculatus_bairdii
ENSSDUG00000018584	PNPT1	94	75.620	ENSPMAG00000008932	PNPT1	98	75.620	Petromyzon_marinus
ENSSDUG00000018584	PNPT1	95	79.184	ENSPCIG00000010236	PNPT1	94	78.890	Phascolarctos_cinereus
ENSSDUG00000018584	PNPT1	99	90.247	ENSPFOG00000010229	PNPT1	99	90.247	Poecilia_formosa
ENSSDUG00000018584	PNPT1	99	90.247	ENSPLAG00000009008	PNPT1	99	90.247	Poecilia_latipinna
ENSSDUG00000018584	PNPT1	99	90.117	ENSPMEG00000004192	PNPT1	99	90.754	Poecilia_mexicana
ENSSDUG00000018584	PNPT1	94	90.371	ENSPREG00000003072	PNPT1	99	90.371	Poecilia_reticulata
ENSSDUG00000018584	PNPT1	98	77.428	ENSPPYG00000012399	PNPT1	97	77.428	Pongo_abelii
ENSSDUG00000018584	PNPT1	93	71.210	ENSPCAG00000010806	PNPT1	99	70.604	Procavia_capensis
ENSSDUG00000018584	PNPT1	94	67.724	ENSPCOG00000015664	PNPT1	99	67.724	Propithecus_coquereli
ENSSDUG00000018584	PNPT1	75	73.902	ENSPVAG00000005379	PNPT1	84	66.083	Pteropus_vampyrus
ENSSDUG00000018584	PNPT1	95	88.372	ENSPNYG00000000363	PNPT1	97	88.372	Pundamilia_nyererei
ENSSDUG00000018584	PNPT1	99	84.505	ENSPNAG00000010891	PNPT1	99	84.505	Pygocentrus_nattereri
ENSSDUG00000018584	PNPT1	95	78.474	ENSRNOG00000003600	Pnpt1	95	77.793	Rattus_norvegicus
ENSSDUG00000018584	PNPT1	99	77.500	ENSRBIG00000043016	PNPT1	97	77.500	Rhinopithecus_bieti
ENSSDUG00000018584	PNPT1	99	77.237	ENSRROG00000040537	PNPT1	97	77.237	Rhinopithecus_roxellana
ENSSDUG00000018584	PNPT1	91	79.799	ENSSBOG00000032574	PNPT1	99	79.060	Saimiri_boliviensis_boliviensis
ENSSDUG00000018584	PNPT1	63	81.276	ENSSHAG00000014040	PNPT1	99	80.816	Sarcophilus_harrisii
ENSSDUG00000018584	PNPT1	97	72.016	ENSSFOG00015017596	PNPT1	99	72.016	Scleropages_formosus
ENSSDUG00000018584	PNPT1	100	91.558	ENSSMAG00000018471	PNPT1	100	91.558	Scophthalmus_maximus
ENSSDUG00000018584	PNPT1	100	99.091	ENSSLDG00000023385	PNPT1	100	99.091	Seriola_lalandi_dorsalis
ENSSDUG00000018584	PNPT1	86	71.690	ENSSARG00000012819	PNPT1	81	71.400	Sorex_araneus
ENSSDUG00000018584	PNPT1	99	75.813	ENSSPUG00000011785	PNPT1	99	75.813	Sphenodon_punctatus
ENSSDUG00000018584	PNPT1	99	89.337	ENSSPAG00000016880	PNPT1	99	89.337	Stegastes_partitus
ENSSDUG00000018584	PNPT1	95	78.610	ENSSSCG00000031882	PNPT1	94	78.273	Sus_scrofa
ENSSDUG00000018584	PNPT1	95	79.835	ENSTGUG00000006908	PNPT1	99	79.835	Taeniopygia_guttata
ENSSDUG00000018584	PNPT1	98	89.523	ENSTRUG00000005495	PNPT1	99	89.062	Takifugu_rubripes
ENSSDUG00000018584	PNPT1	95	89.344	ENSTNIG00000007460	PNPT1	99	88.740	Tetraodon_nigroviridis
ENSSDUG00000018584	PNPT1	95	52.310	ENSTBEG00000010788	PNPT1	95	51.946	Tupaia_belangeri
ENSSDUG00000018584	PNPT1	94	78.650	ENSTTRG00000000029	PNPT1	99	78.650	Tursiops_truncatus
ENSSDUG00000018584	PNPT1	88	80.054	ENSUAMG00000017133	PNPT1	100	78.611	Ursus_americanus
ENSSDUG00000018584	PNPT1	95	79.424	ENSUMAG00000018844	PNPT1	93	78.862	Ursus_maritimus
ENSSDUG00000018584	PNPT1	94	72.039	ENSVPAG00000007097	PNPT1	94	71.545	Vicugna_pacos
ENSSDUG00000018584	PNPT1	95	79.835	ENSVVUG00000010034	PNPT1	96	77.530	Vulpes_vulpes
ENSSDUG00000018584	PNPT1	96	79.620	ENSXETG00000006075	pnpt1	93	79.620	Xenopus_tropicalis
ENSSDUG00000018584	PNPT1	94	91.425	ENSXCOG00000013381	PNPT1	97	91.425	Xiphophorus_couchianus
ENSSDUG00000018584	PNPT1	99	90.377	ENSXMAG00000016907	PNPT1	99	90.959	Xiphophorus_maculatus