EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000018585 (Gene tree)
Gene ID: 111224834
Gene Symbol: cnot4b
Alias: zgc:63566
Full Name: CCR4-NOT transcription complex subunit 4-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 34481 bases
Position: chrBDQW01000138.1:18794794-18829274
Accession: 111224834
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000025625	RRM_1	PF00076.22	1.3e-05	1	1
ENSSDUP00000025602	RRM_1	PF00076.22	1.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000026093	-	1893	XM_022749505	ENSSDUP00000025625	630 (aa)	XP_022605226	-
ENSSDUT00000026069	-	7299	XM_022749501	ENSSDUP00000025602	799 (aa)	XP_022605222	-

Gene Model

Click here to download ENSSDUG00000018585's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000018585's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000018585	cnot4b	99	93.284	ENSSDUG00000022635	cnot4a	81	93.284

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000018585	cnot4b	100	71.296	ENSG00000080802	CNOT4	97	83.019	Homo_sapiens
ENSSDUG00000018585	cnot4b	90	93.284	ENSAPOG00000016272	cnot4a	94	74.000	Acanthochromis_polyacanthus
ENSSDUG00000018585	cnot4b	95	64.073	ENSAMEG00000012081	CNOT4	100	62.194	Ailuropoda_melanoleuca
ENSSDUG00000018585	cnot4b	99	93.284	ENSACIG00000003011	cnot4a	81	93.284	Amphilophus_citrinellus
ENSSDUG00000018585	cnot4b	99	93.284	ENSAOCG00000010792	cnot4a	81	93.284	Amphiprion_ocellaris
ENSSDUG00000018585	cnot4b	99	93.284	ENSAPEG00000004680	cnot4a	81	93.284	Amphiprion_percula
ENSSDUG00000018585	cnot4b	99	92.910	ENSATEG00000017580	cnot4a	81	92.910	Anabas_testudineus
ENSSDUG00000018585	cnot4b	100	65.133	ENSAPLG00000016441	CNOT4	100	64.536	Anas_platyrhynchos
ENSSDUG00000018585	cnot4b	100	64.770	ENSACAG00000011154	CNOT4	100	64.174	Anolis_carolinensis
ENSSDUG00000018585	cnot4b	100	71.649	ENSANAG00000032156	CNOT4	98	85.621	Aotus_nancymaae
ENSSDUG00000018585	cnot4b	99	93.284	ENSACLG00000002514	cnot4a	81	93.284	Astatotilapia_calliptera
ENSSDUG00000018585	cnot4b	99	94.403	ENSAMXG00000011473	cnot4b	100	73.002	Astyanax_mexicanus
ENSSDUG00000018585	cnot4b	100	86.093	ENSAMXG00000001373	cnot4a	88	85.762	Astyanax_mexicanus
ENSSDUG00000018585	cnot4b	100	70.968	ENSBTAG00000017919	CNOT4	100	70.968	Bos_taurus
ENSSDUG00000018585	cnot4b	100	71.649	ENSCJAG00000012532	CNOT4	96	85.621	Callithrix_jacchus
ENSSDUG00000018585	cnot4b	100	71.121	ENSCAFG00000003223	CNOT4	100	71.121	Canis_familiaris
ENSSDUG00000018585	cnot4b	100	71.451	ENSCAFG00020000093	CNOT4	100	71.451	Canis_lupus_dingo
ENSSDUG00000018585	cnot4b	100	71.451	ENSCHIG00000010955	CNOT4	100	71.451	Capra_hircus
ENSSDUG00000018585	cnot4b	100	71.429	ENSTSYG00000000893	CNOT4	98	81.818	Carlito_syrichta
ENSSDUG00000018585	cnot4b	100	69.585	ENSCAPG00000006213	CNOT4	100	69.585	Cavia_aperea
ENSSDUG00000018585	cnot4b	100	71.582	ENSCPOG00000011526	CNOT4	100	71.582	Cavia_porcellus
ENSSDUG00000018585	cnot4b	100	71.319	ENSCCAG00000024414	CNOT4	94	95.197	Cebus_capucinus
ENSSDUG00000018585	cnot4b	100	70.968	ENSCATG00000022607	CNOT4	96	85.621	Cercocebus_atys
ENSSDUG00000018585	cnot4b	100	72.068	ENSCLAG00000001857	CNOT4	100	72.068	Chinchilla_lanigera
ENSSDUG00000018585	cnot4b	100	64.596	ENSCSAG00000009096	CNOT4	100	64.345	Chlorocebus_sabaeus
ENSSDUG00000018585	cnot4b	64	95.187	ENSCHOG00000010412	CNOT4	65	95.187	Choloepus_hoffmanni
ENSSDUG00000018585	cnot4b	100	66.572	ENSCPBG00000004959	CNOT4	100	66.287	Chrysemys_picta_bellii
ENSSDUG00000018585	cnot4b	100	70.968	ENSCANG00000029319	CNOT4	96	85.621	Colobus_angolensis_palliatus
ENSSDUG00000018585	cnot4b	100	71.101	ENSCGRG00001014651	Cnot4	100	71.275	Cricetulus_griseus_chok1gshd
ENSSDUG00000018585	cnot4b	100	71.101	ENSCGRG00000005727	Cnot4	100	71.275	Cricetulus_griseus_crigri
ENSSDUG00000018585	cnot4b	94	93.284	ENSCSEG00000015080	cnot4a	76	93.284	Cynoglossus_semilaevis
ENSSDUG00000018585	cnot4b	99	92.537	ENSCVAG00000009399	cnot4a	81	92.537	Cyprinodon_variegatus
ENSSDUG00000018585	cnot4b	100	91.575	ENSDARG00000007045	cnot4a	81	91.575	Danio_rerio
ENSSDUG00000018585	cnot4b	99	92.537	ENSDARG00000007639	cnot4b	82	92.537	Danio_rerio
ENSSDUG00000018585	cnot4b	100	64.321	ENSDNOG00000009409	CNOT4	94	72.101	Dasypus_novemcinctus
ENSSDUG00000018585	cnot4b	100	71.582	ENSDORG00000012268	Cnot4	100	71.429	Dipodomys_ordii
ENSSDUG00000018585	cnot4b	97	61.814	ENSETEG00000013407	CNOT4	91	61.638	Echinops_telfairi
ENSSDUG00000018585	cnot4b	100	71.472	ENSEASG00005014430	CNOT4	100	71.275	Equus_asinus_asinus
ENSSDUG00000018585	cnot4b	100	71.472	ENSECAG00000020262	CNOT4	100	71.275	Equus_caballus
ENSSDUG00000018585	cnot4b	99	90.545	ENSELUG00000008742	cnot4a	100	69.419	Esox_lucius
ENSSDUG00000018585	cnot4b	98	92.045	ENSELUG00000011540	cnot4b	90	92.045	Esox_lucius
ENSSDUG00000018585	cnot4b	100	71.451	ENSFCAG00000011904	CNOT4	96	83.095	Felis_catus
ENSSDUG00000018585	cnot4b	100	65.133	ENSFALG00000011194	CNOT4	100	64.536	Ficedula_albicollis
ENSSDUG00000018585	cnot4b	100	70.776	ENSFDAG00000013525	CNOT4	100	71.121	Fukomys_damarensis
ENSSDUG00000018585	cnot4b	99	93.657	ENSFHEG00000006608	cnot4a	82	93.657	Fundulus_heteroclitus
ENSSDUG00000018585	cnot4b	95	89.259	ENSGMOG00000001329	cnot4a	90	58.464	Gadus_morhua
ENSSDUG00000018585	cnot4b	100	66.429	ENSGALG00000011682	CNOT4	100	66.143	Gallus_gallus
ENSSDUG00000018585	cnot4b	99	92.910	ENSGACG00000004276	cnot4a	90	92.910	Gasterosteus_aculeatus
ENSSDUG00000018585	cnot4b	100	66.287	ENSGAGG00000017331	CNOT4	100	66.049	Gopherus_agassizii
ENSSDUG00000018585	cnot4b	91	69.360	ENSGGOG00000000142	CNOT4	97	81.967	Gorilla_gorilla
ENSSDUG00000018585	cnot4b	99	93.284	ENSHBUG00000000027	cnot4a	81	93.284	Haplochromis_burtoni
ENSSDUG00000018585	cnot4b	100	70.948	ENSHGLG00000011533	CNOT4	100	71.275	Heterocephalus_glaber_female
ENSSDUG00000018585	cnot4b	85	72.072	ENSHGLG00100013058	CNOT4	94	72.101	Heterocephalus_glaber_male
ENSSDUG00000018585	cnot4b	98	92.105	ENSHCOG00000015815	cnot4a	82	92.105	Hippocampus_comes
ENSSDUG00000018585	cnot4b	100	87.805	ENSIPUG00000016994	cnot4b	84	87.805	Ictalurus_punctatus
ENSSDUG00000018585	cnot4b	99	93.657	ENSIPUG00000006393	cnot4	80	93.657	Ictalurus_punctatus
ENSSDUG00000018585	cnot4b	100	71.296	ENSSTOG00000007717	CNOT4	100	71.451	Ictidomys_tridecemlineatus
ENSSDUG00000018585	cnot4b	100	71.362	ENSJJAG00000016618	Cnot4	100	71.605	Jaculus_jaculus
ENSSDUG00000018585	cnot4b	85	65.306	ENSJJAG00000019991	-	94	65.121	Jaculus_jaculus
ENSSDUG00000018585	cnot4b	90	93.284	ENSKMAG00000004581	cnot4a	100	72.118	Kryptolebias_marmoratus
ENSSDUG00000018585	cnot4b	99	93.657	ENSLBEG00000009999	cnot4a	81	93.657	Labrus_bergylta
ENSSDUG00000018585	cnot4b	100	66.829	ENSLACG00000002647	CNOT4	99	66.571	Latimeria_chalumnae
ENSSDUG00000018585	cnot4b	100	93.040	ENSLOCG00000016126	cnot4a	86	93.040	Lepisosteus_oculatus
ENSSDUG00000018585	cnot4b	100	64.488	ENSLAFG00000000709	CNOT4	100	63.936	Loxodonta_africana
ENSSDUG00000018585	cnot4b	100	70.968	ENSMFAG00000046349	CNOT4	96	85.621	Macaca_fascicularis
ENSSDUG00000018585	cnot4b	100	70.968	ENSMMUG00000016181	CNOT4	96	85.621	Macaca_mulatta
ENSSDUG00000018585	cnot4b	100	71.296	ENSMNEG00000042164	CNOT4	96	85.621	Macaca_nemestrina
ENSSDUG00000018585	cnot4b	100	70.968	ENSMLEG00000032709	CNOT4	96	85.621	Mandrillus_leucophaeus
ENSSDUG00000018585	cnot4b	99	93.284	ENSMAMG00000023194	cnot4a	82	93.284	Mastacembelus_armatus
ENSSDUG00000018585	cnot4b	99	93.284	ENSMZEG00005007312	cnot4a	81	93.284	Maylandia_zebra
ENSSDUG00000018585	cnot4b	100	64.891	ENSMGAG00000011788	CNOT4	100	64.294	Meleagris_gallopavo
ENSSDUG00000018585	cnot4b	100	71.254	ENSMAUG00000020415	Cnot4	100	71.429	Mesocricetus_auratus
ENSSDUG00000018585	cnot4b	100	71.275	ENSMICG00000001667	CNOT4	100	83.023	Microcebus_murinus
ENSSDUG00000018585	cnot4b	100	70.948	ENSMOCG00000020955	Cnot4	100	71.121	Microtus_ochrogaster
ENSSDUG00000018585	cnot4b	93	74.155	ENSMMOG00000014565	cnot4a	97	72.391	Mola_mola
ENSSDUG00000018585	cnot4b	100	64.128	ENSMODG00000014068	CNOT4	100	63.235	Monodelphis_domestica
ENSSDUG00000018585	cnot4b	93	92.910	ENSMALG00000011662	cnot4a	79	92.910	Monopterus_albus
ENSSDUG00000018585	cnot4b	100	71.582	MGP_CAROLIEiJ_G0028217	Cnot4	100	71.231	Mus_caroli
ENSSDUG00000018585	cnot4b	100	71.275	ENSMUSG00000038784	Cnot4	100	71.451	Mus_musculus
ENSSDUG00000018585	cnot4b	100	71.275	MGP_PahariEiJ_G0021974	Cnot4	100	71.451	Mus_pahari
ENSSDUG00000018585	cnot4b	100	71.429	MGP_SPRETEiJ_G0029216	Cnot4	100	71.605	Mus_spretus
ENSSDUG00000018585	cnot4b	100	63.961	ENSMPUG00000004089	CNOT4	100	63.603	Mustela_putorius_furo
ENSSDUG00000018585	cnot4b	100	71.538	ENSMLUG00000008260	CNOT4	100	71.231	Myotis_lucifugus
ENSSDUG00000018585	cnot4b	100	70.968	ENSNGAG00000015030	Cnot4	100	71.275	Nannospalax_galili
ENSSDUG00000018585	cnot4b	85	87.687	ENSNBRG00000021144	cnot4a	100	69.683	Neolamprologus_brichardi
ENSSDUG00000018585	cnot4b	100	70.968	ENSNLEG00000013352	CNOT4	96	84.967	Nomascus_leucogenys
ENSSDUG00000018585	cnot4b	84	68.398	ENSOPRG00000001023	CNOT4	75	99.065	Ochotona_princeps
ENSSDUG00000018585	cnot4b	100	71.582	ENSODEG00000012975	CNOT4	100	71.582	Octodon_degus
ENSSDUG00000018585	cnot4b	99	93.284	ENSONIG00000008656	cnot4a	81	93.284	Oreochromis_niloticus
ENSSDUG00000018585	cnot4b	100	64.321	ENSOANG00000005006	CNOT4	90	72.894	Ornithorhynchus_anatinus
ENSSDUG00000018585	cnot4b	100	64.485	ENSOCUG00000013448	CNOT4	100	64.485	Oryctolagus_cuniculus
ENSSDUG00000018585	cnot4b	99	92.910	ENSORLG00000003727	cnot4a	81	92.910	Oryzias_latipes
ENSSDUG00000018585	cnot4b	99	92.910	ENSORLG00020015684	cnot4a	81	92.910	Oryzias_latipes_hni
ENSSDUG00000018585	cnot4b	99	92.910	ENSORLG00015008470	cnot4a	81	92.910	Oryzias_latipes_hsok
ENSSDUG00000018585	cnot4b	99	93.284	ENSOMEG00000011084	cnot4a	91	93.284	Oryzias_melastigma
ENSSDUG00000018585	cnot4b	100	64.084	ENSOGAG00000015499	CNOT4	100	64.167	Otolemur_garnettii
ENSSDUG00000018585	cnot4b	100	63.961	ENSOARG00000008803	CNOT4	100	63.939	Ovis_aries
ENSSDUG00000018585	cnot4b	100	70.814	ENSPPAG00000041937	CNOT4	96	85.621	Pan_paniscus
ENSSDUG00000018585	cnot4b	100	71.121	ENSPPRG00000023940	CNOT4	100	71.121	Panthera_pardus
ENSSDUG00000018585	cnot4b	100	71.296	ENSPTIG00000016601	CNOT4	96	83.095	Panthera_tigris_altaica
ENSSDUG00000018585	cnot4b	100	70.968	ENSPTRG00000019727	CNOT4	96	85.621	Pan_troglodytes
ENSSDUG00000018585	cnot4b	100	70.968	ENSPANG00000017724	CNOT4	96	85.621	Papio_anubis
ENSSDUG00000018585	cnot4b	100	71.541	ENSPKIG00000018137	cnot4a	100	69.432	Paramormyrops_kingsleyae
ENSSDUG00000018585	cnot4b	100	65.572	ENSPSIG00000011256	CNOT4	100	65.207	Pelodiscus_sinensis
ENSSDUG00000018585	cnot4b	85	92.135	ENSPMGG00000005671	cnot4a	100	72.393	Periophthalmus_magnuspinnatus
ENSSDUG00000018585	cnot4b	100	71.101	ENSPEMG00000021566	Cnot4	100	71.275	Peromyscus_maniculatus_bairdii
ENSSDUG00000018585	cnot4b	100	71.495	ENSPCIG00000029622	CNOT4	96	63.113	Phascolarctos_cinereus
ENSSDUG00000018585	cnot4b	99	93.284	ENSPFOG00000002228	cnot4a	82	93.284	Poecilia_formosa
ENSSDUG00000018585	cnot4b	99	93.284	ENSPLAG00000001780	cnot4a	82	93.284	Poecilia_latipinna
ENSSDUG00000018585	cnot4b	99	93.284	ENSPMEG00000006852	cnot4a	82	93.284	Poecilia_mexicana
ENSSDUG00000018585	cnot4b	99	93.284	ENSPREG00000008171	cnot4a	82	93.284	Poecilia_reticulata
ENSSDUG00000018585	cnot4b	100	64.472	ENSPPYG00000018026	CNOT4	100	64.206	Pongo_abelii
ENSSDUG00000018585	cnot4b	100	71.385	ENSPCOG00000019907	CNOT4	100	83.023	Propithecus_coquereli
ENSSDUG00000018585	cnot4b	95	62.987	ENSPVAG00000004905	CNOT4	90	62.247	Pteropus_vampyrus
ENSSDUG00000018585	cnot4b	99	93.284	ENSPNYG00000004276	cnot4a	81	93.284	Pundamilia_nyererei
ENSSDUG00000018585	cnot4b	100	85.762	ENSPNAG00000020433	cnot4a	89	85.430	Pygocentrus_nattereri
ENSSDUG00000018585	cnot4b	99	94.074	ENSPNAG00000008679	cnot4b	82	94.074	Pygocentrus_nattereri
ENSSDUG00000018585	cnot4b	100	63.022	ENSRNOG00000010795	Cnot4	100	62.990	Rattus_norvegicus
ENSSDUG00000018585	cnot4b	100	70.968	ENSRBIG00000043977	CNOT4	96	85.621	Rhinopithecus_bieti
ENSSDUG00000018585	cnot4b	100	71.649	ENSSBOG00000020808	CNOT4	96	85.948	Saimiri_boliviensis_boliviensis
ENSSDUG00000018585	cnot4b	100	64.028	ENSSHAG00000013639	CNOT4	100	63.480	Sarcophilus_harrisii
ENSSDUG00000018585	cnot4b	97	93.725	ENSSFOG00015002019	cnot4a	85	89.377	Scleropages_formosus
ENSSDUG00000018585	cnot4b	100	88.850	ENSSFOG00015017285	CNOT4	100	74.149	Scleropages_formosus
ENSSDUG00000018585	cnot4b	99	93.284	ENSSMAG00000008614	cnot4a	81	93.284	Scophthalmus_maximus
ENSSDUG00000018585	cnot4b	100	87.546	ENSSLDG00000014347	cnot4b	100	86.560	Seriola_lalandi_dorsalis
ENSSDUG00000018585	cnot4b	99	93.284	ENSSLDG00000015770	cnot4a	81	93.284	Seriola_lalandi_dorsalis
ENSSDUG00000018585	cnot4b	100	71.275	ENSSPUG00000004677	CNOT4	100	70.968	Sphenodon_punctatus
ENSSDUG00000018585	cnot4b	99	93.284	ENSSPAG00000012329	cnot4a	81	93.284	Stegastes_partitus
ENSSDUG00000018585	cnot4b	100	71.121	ENSSSCG00000021354	CNOT4	100	71.121	Sus_scrofa
ENSSDUG00000018585	cnot4b	100	65.133	ENSTGUG00000009161	CNOT4	100	64.536	Taeniopygia_guttata
ENSSDUG00000018585	cnot4b	99	92.910	ENSTRUG00000016861	cnot4a	82	92.910	Takifugu_rubripes
ENSSDUG00000018585	cnot4b	100	67.530	ENSTNIG00000016000	cnot4a	100	62.136	Tetraodon_nigroviridis
ENSSDUG00000018585	cnot4b	89	67.354	ENSTBEG00000002202	CNOT4	88	58.629	Tupaia_belangeri
ENSSDUG00000018585	cnot4b	95	63.990	ENSTTRG00000005122	CNOT4	83	72.101	Tursiops_truncatus
ENSSDUG00000018585	cnot4b	100	71.121	ENSUAMG00000026759	CNOT4	100	71.121	Ursus_americanus
ENSSDUG00000018585	cnot4b	99	71.207	ENSUMAG00000015351	CNOT4	94	72.101	Ursus_maritimus
ENSSDUG00000018585	cnot4b	100	71.451	ENSVVUG00000006200	CNOT4	100	71.451	Vulpes_vulpes
ENSSDUG00000018585	cnot4b	99	90.741	ENSXETG00000010594	cnot4	89	90.741	Xenopus_tropicalis
ENSSDUG00000018585	cnot4b	89	69.652	ENSXCOG00000020824	cnot4a	86	69.931	Xiphophorus_couchianus
ENSSDUG00000018585	cnot4b	99	93.284	ENSXMAG00000016984	cnot4a	82	93.284	Xiphophorus_maculatus