EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000018643 (Gene tree)
Gene ID: 111223499
Gene Symbol: mrps21
Alias: zgc:163126
Full Name: mitochondrial ribosomal protein S21
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 4443 bases
Position: chrBDQW01000110.1:9764577-9769019
Accession: 111223499
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000025698	Ribosomal_S21	PF01165.20	2.8e-16	1	1
ENSSDUP00000025700	Ribosomal_S21	PF01165.20	2.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000026167	-	1643	-	ENSSDUP00000025700	97 (aa)	-	-
ENSSDUT00000026165	-	1622	XM_022747671	ENSSDUP00000025698	87 (aa)	XP_022603392	UPI000BBE50BD

Gene Model

Click here to download ENSSDUG00000018643's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000018643's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000018643	mrps21	100	83.908	ENSAPOG00000005886	mrps21	100	83.908	Acanthochromis_polyacanthus
ENSSDUG00000018643	mrps21	100	82.759	ENSACIG00000011012	mrps21	100	82.759	Amphilophus_citrinellus
ENSSDUG00000018643	mrps21	100	83.908	ENSAOCG00000014214	mrps21	100	83.908	Amphiprion_ocellaris
ENSSDUG00000018643	mrps21	100	83.908	ENSAPEG00000008831	mrps21	100	83.908	Amphiprion_percula
ENSSDUG00000018643	mrps21	100	83.908	ENSAPEG00000009088	mrps21	100	83.908	Amphiprion_percula
ENSSDUG00000018643	mrps21	100	88.506	ENSATEG00000008938	mrps21	100	88.506	Anabas_testudineus
ENSSDUG00000018643	mrps21	100	81.609	ENSACLG00000009659	mrps21	100	81.609	Astatotilapia_calliptera
ENSSDUG00000018643	mrps21	100	74.713	ENSAMXG00000032876	mrps21	100	74.713	Astyanax_mexicanus
ENSSDUG00000018643	mrps21	100	68.966	ENSCSEG00000007889	mrps21	100	68.966	Cynoglossus_semilaevis
ENSSDUG00000018643	mrps21	100	85.057	ENSCVAG00000017982	mrps21	100	85.057	Cyprinodon_variegatus
ENSSDUG00000018643	mrps21	100	71.264	ENSDARG00000070985	mrps21	100	71.264	Danio_rerio
ENSSDUG00000018643	mrps21	68	54.237	ENSEBUG00000006949	mrps21	81	42.222	Eptatretus_burgeri
ENSSDUG00000018643	mrps21	100	77.011	ENSELUG00000007710	mrps21	84	77.011	Esox_lucius
ENSSDUG00000018643	mrps21	100	86.207	ENSFHEG00000012430	mrps21	100	86.207	Fundulus_heteroclitus
ENSSDUG00000018643	mrps21	100	74.713	ENSGMOG00000003085	mrps21	100	74.713	Gadus_morhua
ENSSDUG00000018643	mrps21	100	81.609	ENSGAFG00000004209	mrps21	100	81.609	Gambusia_affinis
ENSSDUG00000018643	mrps21	100	81.609	ENSGACG00000003294	mrps21	100	81.609	Gasterosteus_aculeatus
ENSSDUG00000018643	mrps21	100	81.609	ENSHBUG00000020177	mrps21	100	81.609	Haplochromis_burtoni
ENSSDUG00000018643	mrps21	99	81.395	ENSHCOG00000005818	mrps21	99	81.395	Hippocampus_comes
ENSSDUG00000018643	mrps21	99	81.395	ENSHCOG00000005872	mrps21	99	81.395	Hippocampus_comes
ENSSDUG00000018643	mrps21	100	72.414	ENSIPUG00000008123	mrps21	100	72.414	Ictalurus_punctatus
ENSSDUG00000018643	mrps21	100	86.207	ENSKMAG00000011957	mrps21	100	86.207	Kryptolebias_marmoratus
ENSSDUG00000018643	mrps21	99	83.721	ENSLBEG00000026904	mrps21	99	83.721	Labrus_bergylta
ENSSDUG00000018643	mrps21	100	81.609	ENSMAMG00000001380	mrps21	100	81.609	Mastacembelus_armatus
ENSSDUG00000018643	mrps21	100	81.609	ENSMZEG00005026509	mrps21	100	81.609	Maylandia_zebra
ENSSDUG00000018643	mrps21	100	63.333	ENSMGAG00000000705	-	100	63.333	Meleagris_gallopavo
ENSSDUG00000018643	mrps21	100	79.310	ENSMMOG00000015825	mrps21	100	79.310	Mola_mola
ENSSDUG00000018643	mrps21	100	80.460	ENSMALG00000011695	mrps21	100	80.460	Monopterus_albus
ENSSDUG00000018643	mrps21	76	77.273	ENSNBRG00000017499	mrps21	72	81.250	Neolamprologus_brichardi
ENSSDUG00000018643	mrps21	100	81.609	ENSONIG00000019708	mrps21	100	81.609	Oreochromis_niloticus
ENSSDUG00000018643	mrps21	100	81.609	ENSORLG00000028898	mrps21	100	81.609	Oryzias_latipes
ENSSDUG00000018643	mrps21	100	81.609	ENSORLG00020007891	mrps21	100	81.609	Oryzias_latipes_hni
ENSSDUG00000018643	mrps21	100	83.908	ENSOMEG00000006950	mrps21	100	83.908	Oryzias_melastigma
ENSSDUG00000018643	mrps21	100	70.115	ENSPKIG00000010445	mrps21	100	70.115	Paramormyrops_kingsleyae
ENSSDUG00000018643	mrps21	100	80.460	ENSPMGG00000000916	mrps21	100	80.460	Periophthalmus_magnuspinnatus
ENSSDUG00000018643	mrps21	100	80.460	ENSPFOG00000008722	mrps21	100	80.460	Poecilia_formosa
ENSSDUG00000018643	mrps21	100	80.460	ENSPLAG00000019397	mrps21	100	80.460	Poecilia_latipinna
ENSSDUG00000018643	mrps21	100	81.609	ENSPMEG00000013907	mrps21	100	81.609	Poecilia_mexicana
ENSSDUG00000018643	mrps21	100	80.460	ENSPREG00000019017	mrps21	100	80.460	Poecilia_reticulata
ENSSDUG00000018643	mrps21	100	82.759	ENSPNYG00000011464	mrps21	100	82.759	Pundamilia_nyererei
ENSSDUG00000018643	mrps21	100	72.414	ENSPNAG00000017115	mrps21	100	72.414	Pygocentrus_nattereri
ENSSDUG00000018643	mrps21	100	70.115	ENSSFOG00015021982	mrps21	100	70.115	Scleropages_formosus
ENSSDUG00000018643	mrps21	100	82.759	ENSSMAG00000002544	mrps21	100	82.759	Scophthalmus_maximus
ENSSDUG00000018643	mrps21	100	98.851	ENSSLDG00000014000	mrps21	100	98.851	Seriola_lalandi_dorsalis
ENSSDUG00000018643	mrps21	99	80.233	ENSSPAG00000003551	mrps21	99	80.233	Stegastes_partitus
ENSSDUG00000018643	mrps21	100	75.862	ENSTRUG00000022345	mrps21	100	75.862	Takifugu_rubripes
ENSSDUG00000018643	mrps21	100	82.759	ENSXCOG00000019742	mrps21	100	82.759	Xiphophorus_couchianus
ENSSDUG00000018643	mrps21	100	82.759	ENSXMAG00000029139	mrps21	100	82.759	Xiphophorus_maculatus