EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000018660 (Gene tree)
Gene ID: 111235231
Gene Symbol: zbtb18
Alias: si:ch211-221n23.1|znf238
Full Name: zinc finger and BTB domain containing 18
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 1698 bases
Position: chrBDQW01000478.1:5870041-5871738
Accession: 111235231
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000025720	zf-C2H2	PF00096.26	3.1e-12	1	3
ENSSDUP00000025720	zf-C2H2	PF00096.26	3.1e-12	2	3
ENSSDUP00000025720	zf-C2H2	PF00096.26	3.1e-12	3	3
ENSSDUP00000025720	zf-met	PF12874.7	1.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000026188	-	1698	XM_022763626	ENSSDUP00000025720	565 (aa)	XP_022619347	UPI000BBE91A1

Gene Model

Click here to download ENSSDUG00000018660's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000018660's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000018660	zbtb18	51	36.066	ENSSDUG00000020890	bcl6b	54	36.066
ENSSDUG00000018660	zbtb18	61	36.220	ENSSDUG00000002796	znf131	74	36.220
ENSSDUG00000018660	zbtb18	95	41.026	ENSSDUG00000021980	zbtb16a	54	41.026
ENSSDUG00000018660	zbtb18	56	34.513	ENSSDUG00000009948	ZBTB14	72	34.513

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000018660	zbtb18	100	97.887	ENSAPOG00000005168	zbtb18	98	97.887	Acanthochromis_polyacanthus
ENSSDUG00000018660	zbtb18	100	86.372	ENSACIG00000008655	zbtb18	98	86.372	Amphilophus_citrinellus
ENSSDUG00000018660	zbtb18	100	97.887	ENSAOCG00000014105	zbtb18	98	97.887	Amphiprion_ocellaris
ENSSDUG00000018660	zbtb18	100	97.373	ENSAPEG00000003817	zbtb18	77	97.373	Amphiprion_percula
ENSSDUG00000018660	zbtb18	100	96.991	ENSATEG00000010192	zbtb18	98	96.991	Anabas_testudineus
ENSSDUG00000018660	zbtb18	100	97.168	ENSACLG00000022978	zbtb18	97	97.168	Astatotilapia_calliptera
ENSSDUG00000018660	zbtb18	100	73.448	ENSAMXG00000042119	zbtb18	98	72.931	Astyanax_mexicanus
ENSSDUG00000018660	zbtb18	100	93.097	ENSCSEG00000003083	zbtb18	98	93.097	Cynoglossus_semilaevis
ENSSDUG00000018660	zbtb18	100	94.690	ENSCVAG00000016785	zbtb18	98	94.690	Cyprinodon_variegatus
ENSSDUG00000018660	zbtb18	100	72.241	ENSDARG00000028228	zbtb18	100	74.138	Danio_rerio
ENSSDUG00000018660	zbtb18	100	75.614	ENSELUG00000013471	zbtb18	98	75.263	Esox_lucius
ENSSDUG00000018660	zbtb18	100	94.700	ENSFHEG00000020005	zbtb18	98	94.700	Fundulus_heteroclitus
ENSSDUG00000018660	zbtb18	56	95.238	ENSGMOG00000018718	zbtb18	58	91.241	Gadus_morhua
ENSSDUG00000018660	zbtb18	100	93.110	ENSGAFG00000000619	zbtb18	98	93.110	Gambusia_affinis
ENSSDUG00000018660	zbtb18	100	92.212	ENSGACG00000010518	zbtb18	96	92.920	Gasterosteus_aculeatus
ENSSDUG00000018660	zbtb18	100	97.168	ENSHBUG00000013654	zbtb18	98	97.168	Haplochromis_burtoni
ENSSDUG00000018660	zbtb18	62	82.105	ENSHCOG00000002345	zbtb18	94	82.105	Hippocampus_comes
ENSSDUG00000018660	zbtb18	100	66.725	ENSIPUG00000008912	zbtb18	98	66.432	Ictalurus_punctatus
ENSSDUG00000018660	zbtb18	100	95.752	ENSKMAG00000002780	zbtb18	98	95.752	Kryptolebias_marmoratus
ENSSDUG00000018660	zbtb18	100	95.398	ENSLBEG00000014796	zbtb18	98	95.398	Labrus_bergylta
ENSSDUG00000018660	zbtb18	85	60.324	ENSMFAG00000033326	ZBTB18	98	59.229	Macaca_fascicularis
ENSSDUG00000018660	zbtb18	85	60.526	ENSMMUG00000015664	ZBTB18	100	59.432	Macaca_mulatta
ENSSDUG00000018660	zbtb18	100	97.699	ENSMAMG00000021720	zbtb18	98	97.699	Mastacembelus_armatus
ENSSDUG00000018660	zbtb18	100	97.168	ENSMZEG00005027394	zbtb18	98	97.168	Maylandia_zebra
ENSSDUG00000018660	zbtb18	96	51.197	ENSMGAG00000015389	-	100	51.017	Meleagris_gallopavo
ENSSDUG00000018660	zbtb18	100	87.788	ENSMMOG00000007888	zbtb18	99	87.788	Mola_mola
ENSSDUG00000018660	zbtb18	100	96.283	ENSMALG00000000725	zbtb18	98	96.283	Monopterus_albus
ENSSDUG00000018660	zbtb18	100	97.699	ENSNBRG00000013796	zbtb18	100	97.699	Neolamprologus_brichardi
ENSSDUG00000018660	zbtb18	100	97.522	ENSONIG00000000862	zbtb18	98	97.522	Oreochromis_niloticus
ENSSDUG00000018660	zbtb18	100	95.221	ENSORLG00000027425	zbtb18	97	95.221	Oryzias_latipes
ENSSDUG00000018660	zbtb18	100	95.398	ENSORLG00020011988	zbtb18	97	95.398	Oryzias_latipes_hni
ENSSDUG00000018660	zbtb18	100	95.221	ENSORLG00015017457	zbtb18	97	95.221	Oryzias_latipes_hsok
ENSSDUG00000018660	zbtb18	100	95.398	ENSOMEG00000011249	zbtb18	97	95.398	Oryzias_melastigma
ENSSDUG00000018660	zbtb18	100	55.786	ENSPKIG00000008787	-	100	55.786	Paramormyrops_kingsleyae
ENSSDUG00000018660	zbtb18	100	70.557	ENSPKIG00000021964	zbtb18	95	71.453	Paramormyrops_kingsleyae
ENSSDUG00000018660	zbtb18	100	83.363	ENSPMGG00000008020	zbtb18	100	83.363	Periophthalmus_magnuspinnatus
ENSSDUG00000018660	zbtb18	100	92.580	ENSPFOG00000022080	zbtb18	100	92.580	Poecilia_formosa
ENSSDUG00000018660	zbtb18	100	86.926	ENSPLAG00000011299	-	100	87.102	Poecilia_latipinna
ENSSDUG00000018660	zbtb18	100	86.926	ENSPLAG00000020960	zbtb18	100	87.102	Poecilia_latipinna
ENSSDUG00000018660	zbtb18	100	93.463	ENSPMEG00000007554	zbtb18	100	93.463	Poecilia_mexicana
ENSSDUG00000018660	zbtb18	100	93.816	ENSPREG00000008576	zbtb18	98	93.816	Poecilia_reticulata
ENSSDUG00000018660	zbtb18	100	97.168	ENSPNYG00000001530	zbtb18	98	97.168	Pundamilia_nyererei
ENSSDUG00000018660	zbtb18	86	71.713	ENSPNAG00000014066	zbtb18	86	71.116	Pygocentrus_nattereri
ENSSDUG00000018660	zbtb18	100	95.398	ENSSMAG00000018041	zbtb18	100	95.398	Scophthalmus_maximus
ENSSDUG00000018660	zbtb18	100	99.646	ENSSLDG00000022573	zbtb18	100	99.646	Seriola_lalandi_dorsalis
ENSSDUG00000018660	zbtb18	96	47.253	ENSSPUG00000010554	-	100	50.549	Sphenodon_punctatus
ENSSDUG00000018660	zbtb18	100	97.876	ENSSPAG00000002691	zbtb18	98	97.876	Stegastes_partitus
ENSSDUG00000018660	zbtb18	100	94.690	ENSTRUG00000020604	zbtb18	100	94.690	Takifugu_rubripes
ENSSDUG00000018660	zbtb18	100	86.219	ENSTNIG00000000430	zbtb18	98	86.219	Tetraodon_nigroviridis
ENSSDUG00000018660	zbtb18	100	87.633	ENSXCOG00000013308	zbtb18	100	88.516	Xiphophorus_couchianus
ENSSDUG00000018660	zbtb18	100	83.746	ENSXMAG00000018241	zbtb18	99	83.922	Xiphophorus_maculatus