EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000018746 (Gene tree)
Gene ID: 111238146
Gene Symbol: srprb
Alias: wu:fk57h10|zgc:111820|zgc:92746
Full Name: SRP receptor subunit beta
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 6374 bases
Position: chrBDQW01001195.1:400342-406715
Accession: 111238146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000025852	MMR_HSR1	PF01926.23	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000026319	-	5035	XM_022767549	ENSSDUP00000025852	293 (aa)	XP_022623270	-

Gene Model

Click here to download ENSSDUG00000018746's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000018746's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000018746	srprb	58	30.409	ENSSDUG00000017356	-	88	30.409
ENSSDUG00000018746	srprb	60	30.682	ENSSDUG00000007780	arf2b	91	30.682

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000018746	srprb	94	92.058	ENSAPOG00000021219	srprb	100	92.058	Acanthochromis_polyacanthus
ENSSDUG00000018746	srprb	91	90.226	ENSACIG00000014621	srprb	100	90.226	Amphilophus_citrinellus
ENSSDUG00000018746	srprb	94	92.058	ENSAOCG00000017265	srprb	100	92.058	Amphiprion_ocellaris
ENSSDUG00000018746	srprb	99	86.711	ENSAPEG00000024541	srprb	96	86.711	Amphiprion_percula
ENSSDUG00000018746	srprb	94	89.818	ENSATEG00000014016	srprb	100	89.818	Anabas_testudineus
ENSSDUG00000018746	srprb	94	90.217	ENSACLG00000016748	srprb	100	90.217	Astatotilapia_calliptera
ENSSDUG00000018746	srprb	91	70.301	ENSAMXG00000044118	srprb	100	70.301	Astyanax_mexicanus
ENSSDUG00000018746	srprb	94	85.091	ENSCSEG00000017194	srprb	100	85.091	Cynoglossus_semilaevis
ENSSDUG00000018746	srprb	91	87.594	ENSCVAG00000004221	srprb	100	87.594	Cyprinodon_variegatus
ENSSDUG00000018746	srprb	91	67.293	ENSDARG00000030949	srprb	100	67.293	Danio_rerio
ENSSDUG00000018746	srprb	90	81.369	ENSELUG00000009740	srprb	97	81.369	Esox_lucius
ENSSDUG00000018746	srprb	91	88.346	ENSFHEG00000006004	srprb	100	88.346	Fundulus_heteroclitus
ENSSDUG00000018746	srprb	92	79.336	ENSGMOG00000002081	srprb	100	79.336	Gadus_morhua
ENSSDUG00000018746	srprb	90	85.985	ENSGAFG00000012593	srprb	99	85.985	Gambusia_affinis
ENSSDUG00000018746	srprb	92	88.930	ENSGACG00000009891	srprb	100	88.930	Gasterosteus_aculeatus
ENSSDUG00000018746	srprb	94	90.217	ENSHBUG00000002145	srprb	100	90.217	Haplochromis_burtoni
ENSSDUG00000018746	srprb	92	82.528	ENSHCOG00000007732	srprb	99	82.528	Hippocampus_comes
ENSSDUG00000018746	srprb	86	67.857	ENSIPUG00000004177	srprb	94	67.857	Ictalurus_punctatus
ENSSDUG00000018746	srprb	91	85.338	ENSKMAG00000020736	srprb	100	85.338	Kryptolebias_marmoratus
ENSSDUG00000018746	srprb	94	88.364	ENSLBEG00000021483	srprb	100	88.364	Labrus_bergylta
ENSSDUG00000018746	srprb	98	68.056	ENSLOCG00000009740	srprb	96	68.403	Lepisosteus_oculatus
ENSSDUG00000018746	srprb	94	91.273	ENSMAMG00000011876	srprb	100	91.273	Mastacembelus_armatus
ENSSDUG00000018746	srprb	88	90.347	ENSMZEG00005016621	srprb	100	90.347	Maylandia_zebra
ENSSDUG00000018746	srprb	91	89.179	ENSMMOG00000012550	srprb	99	89.179	Mola_mola
ENSSDUG00000018746	srprb	94	89.455	ENSMALG00000012595	srprb	100	89.455	Monopterus_albus
ENSSDUG00000018746	srprb	70	90.777	ENSNBRG00000004699	srprb	95	84.513	Neolamprologus_brichardi
ENSSDUG00000018746	srprb	96	89.007	ENSONIG00000003788	srprb	84	89.007	Oreochromis_niloticus
ENSSDUG00000018746	srprb	92	82.288	ENSORLG00000006430	srprb	99	82.288	Oryzias_latipes
ENSSDUG00000018746	srprb	94	81.818	ENSORLG00020003413	srprb	100	81.818	Oryzias_latipes_hni
ENSSDUG00000018746	srprb	94	81.818	ENSORLG00015000166	srprb	100	81.818	Oryzias_latipes_hsok
ENSSDUG00000018746	srprb	94	82.545	ENSOMEG00000012735	srprb	100	82.545	Oryzias_melastigma
ENSSDUG00000018746	srprb	85	71.713	ENSPKIG00000013147	srprb	95	71.713	Paramormyrops_kingsleyae
ENSSDUG00000018746	srprb	94	81.455	ENSPMGG00000014061	srprb	100	81.455	Periophthalmus_magnuspinnatus
ENSSDUG00000018746	srprb	90	86.364	ENSPFOG00000011347	srprb	96	86.364	Poecilia_formosa
ENSSDUG00000018746	srprb	88	87.984	ENSPLAG00000001156	srprb	100	87.984	Poecilia_latipinna
ENSSDUG00000018746	srprb	88	87.209	ENSPMEG00000012169	srprb	100	87.209	Poecilia_mexicana
ENSSDUG00000018746	srprb	88	86.822	ENSPREG00000001449	srprb	100	86.822	Poecilia_reticulata
ENSSDUG00000018746	srprb	94	90.217	ENSPNYG00000005911	srprb	100	90.217	Pundamilia_nyererei
ENSSDUG00000018746	srprb	91	72.180	ENSPNAG00000009983	srprb	100	72.180	Pygocentrus_nattereri
ENSSDUG00000018746	srprb	86	74.803	ENSSFOG00015019355	srprb	95	74.803	Scleropages_formosus
ENSSDUG00000018746	srprb	94	90.909	ENSSMAG00000013202	srprb	100	90.909	Scophthalmus_maximus
ENSSDUG00000018746	srprb	94	99.636	ENSSLDG00000020560	srprb	100	99.636	Seriola_lalandi_dorsalis
ENSSDUG00000018746	srprb	94	92.058	ENSSPAG00000008898	srprb	100	92.058	Stegastes_partitus
ENSSDUG00000018746	srprb	94	86.182	ENSTRUG00000022463	srprb	100	86.182	Takifugu_rubripes
ENSSDUG00000018746	srprb	89	81.298	ENSTNIG00000007725	srprb	100	81.298	Tetraodon_nigroviridis
ENSSDUG00000018746	srprb	88	87.984	ENSXCOG00000012585	srprb	100	87.984	Xiphophorus_couchianus
ENSSDUG00000018746	srprb	88	87.597	ENSXMAG00000028725	srprb	100	87.597	Xiphophorus_maculatus