EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000018818 (Gene tree)
Gene ID: 111223961
Gene Symbol: tarbp2
Alias: fj51e12|wu:fj51e12|zgc:63778
Full Name: TARBP2%2C RISC loading complex RNA binding subunit
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 7598 bases
Position: chrBDQW01000121.1:1902542-1910139
Accession: 111223961
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000025938	dsrm	PF00035.26	3.3e-35	1	2
ENSSDUP00000025938	dsrm	PF00035.26	3.3e-35	2	2
ENSSDUP00000025938	DND1_DSRM	PF14709.7	6.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000026405	-	4731	XM_022748281	ENSSDUP00000025938	345 (aa)	XP_022604002	UPI000BBEACEA

Gene Model

Click here to download ENSSDUG00000018818's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000018818's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000018818	tarbp2	93	45.171	ENSSDUG00000000636	prkra	91	44.688

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000018818	tarbp2	100	64.481	ENSG00000139546	TARBP2	100	65.797	Homo_sapiens
ENSSDUG00000018818	tarbp2	100	97.681	ENSAPOG00000019892	tarbp2	100	97.681	Acanthochromis_polyacanthus
ENSSDUG00000018818	tarbp2	100	65.301	ENSAMEG00000012601	TARBP2	100	64.481	Ailuropoda_melanoleuca
ENSSDUG00000018818	tarbp2	100	94.493	ENSACIG00000016780	tarbp2	100	94.493	Amphilophus_citrinellus
ENSSDUG00000018818	tarbp2	100	97.971	ENSAOCG00000005201	tarbp2	100	97.971	Amphiprion_ocellaris
ENSSDUG00000018818	tarbp2	100	97.971	ENSAPEG00000008376	tarbp2	100	97.971	Amphiprion_percula
ENSSDUG00000018818	tarbp2	100	97.391	ENSATEG00000025012	tarbp2	100	97.391	Anabas_testudineus
ENSSDUG00000018818	tarbp2	100	68.232	ENSACAG00000001100	TARBP2	100	67.680	Anolis_carolinensis
ENSSDUG00000018818	tarbp2	100	64.481	ENSANAG00000034453	TARBP2	94	75.676	Aotus_nancymaae
ENSSDUG00000018818	tarbp2	97	93.433	ENSACLG00000018569	tarbp2	97	93.433	Astatotilapia_calliptera
ENSSDUG00000018818	tarbp2	100	85.549	ENSAMXG00000016665	tarbp2	100	84.393	Astyanax_mexicanus
ENSSDUG00000018818	tarbp2	100	65.574	ENSBTAG00000000435	TARBP2	100	65.027	Bos_taurus
ENSSDUG00000018818	tarbp2	100	64.754	ENSCJAG00000018668	TARBP2	100	64.481	Callithrix_jacchus
ENSSDUG00000018818	tarbp2	100	68.012	ENSCAFG00000006874	TARBP2	100	67.435	Canis_familiaris
ENSSDUG00000018818	tarbp2	100	64.754	ENSCAFG00020020735	TARBP2	100	66.087	Canis_lupus_dingo
ENSSDUG00000018818	tarbp2	100	65.135	ENSCHIG00000026017	TARBP2	100	64.420	Capra_hircus
ENSSDUG00000018818	tarbp2	100	65.574	ENSTSYG00000035683	TARBP2	94	75.676	Carlito_syrichta
ENSSDUG00000018818	tarbp2	64	69.643	ENSCAPG00000008981	TARBP2	98	70.136	Cavia_aperea
ENSSDUG00000018818	tarbp2	100	65.574	ENSCPOG00000001009	TARBP2	100	64.850	Cavia_porcellus
ENSSDUG00000018818	tarbp2	97	66.011	ENSCCAG00000033025	TARBP2	91	92.453	Cebus_capucinus
ENSSDUG00000018818	tarbp2	100	64.208	ENSCATG00000026344	TARBP2	94	75.676	Cercocebus_atys
ENSSDUG00000018818	tarbp2	100	64.674	ENSCLAG00000009175	TARBP2	100	64.305	Chinchilla_lanigera
ENSSDUG00000018818	tarbp2	100	64.208	ENSCSAG00000005479	TARBP2	100	63.934	Chlorocebus_sabaeus
ENSSDUG00000018818	tarbp2	100	68.975	ENSCPBG00000000654	TARBP2	100	70.588	Chrysemys_picta_bellii
ENSSDUG00000018818	tarbp2	100	64.481	ENSCANG00000040415	TARBP2	91	90.566	Colobus_angolensis_palliatus
ENSSDUG00000018818	tarbp2	100	64.658	ENSCGRG00001011856	TARBP2	100	63.836	Cricetulus_griseus_chok1gshd
ENSSDUG00000018818	tarbp2	100	64.658	ENSCGRG00000009088	TARBP2	100	64.609	Cricetulus_griseus_crigri
ENSSDUG00000018818	tarbp2	100	92.754	ENSCSEG00000010631	tarbp2	100	92.754	Cynoglossus_semilaevis
ENSSDUG00000018818	tarbp2	100	91.014	ENSCVAG00000009832	tarbp2	100	91.014	Cyprinodon_variegatus
ENSSDUG00000018818	tarbp2	100	82.759	ENSDARG00000070471	tarbp2	100	81.844	Danio_rerio
ENSSDUG00000018818	tarbp2	100	65.301	ENSDNOG00000002144	TARBP2	100	64.481	Dasypus_novemcinctus
ENSSDUG00000018818	tarbp2	63	70.588	ENSDORG00000001390	Tarbp2	91	70.588	Dipodomys_ordii
ENSSDUG00000018818	tarbp2	86	80.612	ENSETEG00000002458	TARBP2	77	77.215	Echinops_telfairi
ENSSDUG00000018818	tarbp2	95	58.537	ENSEBUG00000002377	tarbp2	98	59.271	Eptatretus_burgeri
ENSSDUG00000018818	tarbp2	100	65.574	ENSEASG00005010030	TARBP2	100	65.123	Equus_asinus_asinus
ENSSDUG00000018818	tarbp2	100	68.481	ENSECAG00000011695	TARBP2	94	75.676	Equus_caballus
ENSSDUG00000018818	tarbp2	84	62.500	ENSEEUG00000001128	-	99	61.859	Erinaceus_europaeus
ENSSDUG00000018818	tarbp2	100	85.632	ENSELUG00000010642	tarbp2	100	86.782	Esox_lucius
ENSSDUG00000018818	tarbp2	100	65.301	ENSFCAG00000007757	TARBP2	100	64.754	Felis_catus
ENSSDUG00000018818	tarbp2	100	65.301	ENSFDAG00000011932	TARBP2	100	66.122	Fukomys_damarensis
ENSSDUG00000018818	tarbp2	94	91.049	ENSFHEG00000016118	tarbp2	100	91.049	Fundulus_heteroclitus
ENSSDUG00000018818	tarbp2	100	86.455	ENSGMOG00000001290	tarbp2	100	86.455	Gadus_morhua
ENSSDUG00000018818	tarbp2	65	70.852	ENSGALG00000038939	-	84	70.852	Gallus_gallus
ENSSDUG00000018818	tarbp2	100	91.594	ENSGAFG00000013341	tarbp2	100	91.594	Gambusia_affinis
ENSSDUG00000018818	tarbp2	100	90.986	ENSGACG00000006645	tarbp2	100	89.859	Gasterosteus_aculeatus
ENSSDUG00000018818	tarbp2	100	69.252	ENSGAGG00000021169	TARBP2	100	68.144	Gopherus_agassizii
ENSSDUG00000018818	tarbp2	97	66.011	ENSGGOG00000012637	TARBP2	81	85.938	Gorilla_gorilla
ENSSDUG00000018818	tarbp2	100	95.072	ENSHBUG00000018639	tarbp2	100	95.072	Haplochromis_burtoni
ENSSDUG00000018818	tarbp2	100	64.674	ENSHGLG00000001284	TARBP2	100	64.305	Heterocephalus_glaber_female
ENSSDUG00000018818	tarbp2	100	64.674	ENSHGLG00100011274	TARBP2	100	64.305	Heterocephalus_glaber_male
ENSSDUG00000018818	tarbp2	100	87.826	ENSHCOG00000001027	tarbp2	100	87.826	Hippocampus_comes
ENSSDUG00000018818	tarbp2	100	82.808	ENSIPUG00000023701	tarbp2	100	82.521	Ictalurus_punctatus
ENSSDUG00000018818	tarbp2	97	66.854	ENSSTOG00000003678	TARBP2	100	65.164	Ictidomys_tridecemlineatus
ENSSDUG00000018818	tarbp2	100	94.783	ENSKMAG00000012142	tarbp2	100	94.783	Kryptolebias_marmoratus
ENSSDUG00000018818	tarbp2	100	94.915	ENSLBEG00000015027	tarbp2	100	94.915	Labrus_bergylta
ENSSDUG00000018818	tarbp2	74	91.228	ENSLACG00000007087	TARBP2	76	91.228	Latimeria_chalumnae
ENSSDUG00000018818	tarbp2	100	81.609	ENSLOCG00000005711	tarbp2	100	81.214	Lepisosteus_oculatus
ENSSDUG00000018818	tarbp2	72	62.313	ENSLAFG00000002620	TARBP2	73	88.235	Loxodonta_africana
ENSSDUG00000018818	tarbp2	100	64.208	ENSMFAG00000013567	TARBP2	94	75.676	Macaca_fascicularis
ENSSDUG00000018818	tarbp2	100	64.481	ENSMMUG00000018492	TARBP2	100	64.208	Macaca_mulatta
ENSSDUG00000018818	tarbp2	100	64.208	ENSMNEG00000036477	TARBP2	94	75.676	Macaca_nemestrina
ENSSDUG00000018818	tarbp2	100	64.655	ENSMLEG00000029583	TARBP2	94	75.676	Mandrillus_leucophaeus
ENSSDUG00000018818	tarbp2	95	93.272	ENSMAMG00000010272	tarbp2	97	91.228	Mastacembelus_armatus
ENSSDUG00000018818	tarbp2	100	95.652	ENSMZEG00005006895	tarbp2	100	95.652	Maylandia_zebra
ENSSDUG00000018818	tarbp2	100	64.384	ENSMAUG00000019805	Tarbp2	100	64.208	Mesocricetus_auratus
ENSSDUG00000018818	tarbp2	94	67.826	ENSMICG00000027441	TARBP2	94	75.676	Microcebus_murinus
ENSSDUG00000018818	tarbp2	100	64.658	ENSMOCG00000003691	Tarbp2	100	64.481	Microtus_ochrogaster
ENSSDUG00000018818	tarbp2	94	90.909	ENSMMOG00000010374	tarbp2	100	87.021	Mola_mola
ENSSDUG00000018818	tarbp2	100	95.652	ENSMALG00000009773	tarbp2	100	95.652	Monopterus_albus
ENSSDUG00000018818	tarbp2	100	64.658	MGP_CAROLIEiJ_G0020356	Tarbp2	91	92.453	Mus_caroli
ENSSDUG00000018818	tarbp2	100	64.658	ENSMUSG00000023051	Tarbp2	91	92.453	Mus_musculus
ENSSDUG00000018818	tarbp2	100	64.658	MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	Mus_pahari
ENSSDUG00000018818	tarbp2	100	64.658	MGP_SPRETEiJ_G0021249	Tarbp2	91	92.453	Mus_spretus
ENSSDUG00000018818	tarbp2	100	65.479	ENSMPUG00000005944	TARBP2	100	65.027	Mustela_putorius_furo
ENSSDUG00000018818	tarbp2	100	65.847	ENSMLUG00000010035	TARBP2	100	65.668	Myotis_lucifugus
ENSSDUG00000018818	tarbp2	51	92.045	ENSNBRG00000011845	-	84	94.118	Neolamprologus_brichardi
ENSSDUG00000018818	tarbp2	100	64.481	ENSNLEG00000017690	TARBP2	94	75.676	Nomascus_leucogenys
ENSSDUG00000018818	tarbp2	100	68.986	ENSMEUG00000001916	TARBP2	100	68.696	Notamacropus_eugenii
ENSSDUG00000018818	tarbp2	64	71.429	ENSOPRG00000011397	TARBP2	98	71.946	Ochotona_princeps
ENSSDUG00000018818	tarbp2	60	68.421	ENSODEG00000013413	TARBP2	100	67.841	Octodon_degus
ENSSDUG00000018818	tarbp2	95	90.230	ENSONIG00000005115	tarbp2	96	90.230	Oreochromis_niloticus
ENSSDUG00000018818	tarbp2	100	67.213	ENSOCUG00000005700	TARBP2	100	66.120	Oryctolagus_cuniculus
ENSSDUG00000018818	tarbp2	100	92.464	ENSORLG00000005209	tarbp2	100	92.464	Oryzias_latipes
ENSSDUG00000018818	tarbp2	100	92.174	ENSORLG00020017755	tarbp2	100	92.174	Oryzias_latipes_hni
ENSSDUG00000018818	tarbp2	100	92.464	ENSORLG00015013237	tarbp2	100	92.464	Oryzias_latipes_hsok
ENSSDUG00000018818	tarbp2	100	93.333	ENSOMEG00000018860	tarbp2	100	93.333	Oryzias_melastigma
ENSSDUG00000018818	tarbp2	100	64.770	ENSOGAG00000001744	TARBP2	100	64.481	Otolemur_garnettii
ENSSDUG00000018818	tarbp2	100	65.301	ENSOARG00000016437	TARBP2	100	64.754	Ovis_aries
ENSSDUG00000018818	tarbp2	100	64.481	ENSPPAG00000030429	TARBP2	94	75.676	Pan_paniscus
ENSSDUG00000018818	tarbp2	100	65.574	ENSPPRG00000000189	TARBP2	100	64.754	Panthera_pardus
ENSSDUG00000018818	tarbp2	100	67.318	ENSPTIG00000007859	TARBP2	100	66.947	Panthera_tigris_altaica
ENSSDUG00000018818	tarbp2	100	64.481	ENSPTRG00000005020	TARBP2	94	75.676	Pan_troglodytes
ENSSDUG00000018818	tarbp2	100	64.208	ENSPANG00000010689	TARBP2	94	75.676	Papio_anubis
ENSSDUG00000018818	tarbp2	100	80.056	ENSPKIG00000002455	tarbp2	100	79.494	Paramormyrops_kingsleyae
ENSSDUG00000018818	tarbp2	100	91.594	ENSPMGG00000006497	tarbp2	100	91.594	Periophthalmus_magnuspinnatus
ENSSDUG00000018818	tarbp2	100	63.836	ENSPEMG00000014285	Tarbp2	100	63.661	Peromyscus_maniculatus_bairdii
ENSSDUG00000018818	tarbp2	92	61.562	ENSPMAG00000000105	tarbp2	99	61.371	Petromyzon_marinus
ENSSDUG00000018818	tarbp2	100	68.986	ENSPCIG00000006672	TARBP2	92	68.696	Phascolarctos_cinereus
ENSSDUG00000018818	tarbp2	100	92.754	ENSPFOG00000007586	tarbp2	100	92.754	Poecilia_formosa
ENSSDUG00000018818	tarbp2	100	92.174	ENSPLAG00000017659	tarbp2	100	92.174	Poecilia_latipinna
ENSSDUG00000018818	tarbp2	100	92.754	ENSPMEG00000007775	tarbp2	100	92.754	Poecilia_mexicana
ENSSDUG00000018818	tarbp2	100	92.174	ENSPREG00000007815	tarbp2	100	92.174	Poecilia_reticulata
ENSSDUG00000018818	tarbp2	97	65.680	ENSPPYG00000004583	TARBP2	97	64.638	Pongo_abelii
ENSSDUG00000018818	tarbp2	78	62.887	ENSPCAG00000005352	TARBP2	60	71.493	Procavia_capensis
ENSSDUG00000018818	tarbp2	100	65.574	ENSPCOG00000013102	TARBP2	94	75.676	Propithecus_coquereli
ENSSDUG00000018818	tarbp2	100	65.027	ENSPVAG00000012286	TARBP2	100	64.481	Pteropus_vampyrus
ENSSDUG00000018818	tarbp2	100	95.362	ENSPNYG00000014125	tarbp2	100	95.362	Pundamilia_nyererei
ENSSDUG00000018818	tarbp2	100	85.549	ENSPNAG00000011128	tarbp2	100	84.682	Pygocentrus_nattereri
ENSSDUG00000018818	tarbp2	100	64.658	ENSRNOG00000042355	Tarbp2	100	64.208	Rattus_norvegicus
ENSSDUG00000018818	tarbp2	100	64.481	ENSRBIG00000027150	TARBP2	94	75.676	Rhinopithecus_bieti
ENSSDUG00000018818	tarbp2	100	64.481	ENSRROG00000044783	TARBP2	94	75.676	Rhinopithecus_roxellana
ENSSDUG00000018818	tarbp2	100	64.481	ENSSBOG00000027305	TARBP2	94	75.676	Saimiri_boliviensis_boliviensis
ENSSDUG00000018818	tarbp2	94	71.605	ENSSHAG00000007064	TARBP2	100	70.988	Sarcophilus_harrisii
ENSSDUG00000018818	tarbp2	100	81.337	ENSSFOG00015010784	tarbp2	100	80.447	Scleropages_formosus
ENSSDUG00000018818	tarbp2	100	93.732	ENSSMAG00000012769	tarbp2	100	93.732	Scophthalmus_maximus
ENSSDUG00000018818	tarbp2	100	99.420	ENSSLDG00000001835	tarbp2	100	99.420	Seriola_lalandi_dorsalis
ENSSDUG00000018818	tarbp2	76	67.164	ENSSARG00000001010	TARBP2	73	67.164	Sorex_araneus
ENSSDUG00000018818	tarbp2	68	70.130	ENSSPUG00000005895	TARBP2	67	88.136	Sphenodon_punctatus
ENSSDUG00000018818	tarbp2	100	97.681	ENSSPAG00000022797	tarbp2	100	97.681	Stegastes_partitus
ENSSDUG00000018818	tarbp2	100	65.027	ENSSSCG00000000276	TARBP2	100	66.667	Sus_scrofa
ENSSDUG00000018818	tarbp2	71	55.769	ENSTGUG00000017031	TARBP2	100	54.724	Taeniopygia_guttata
ENSSDUG00000018818	tarbp2	100	93.333	ENSTRUG00000014379	tarbp2	100	93.333	Takifugu_rubripes
ENSSDUG00000018818	tarbp2	100	92.754	ENSTNIG00000007065	tarbp2	100	92.754	Tetraodon_nigroviridis
ENSSDUG00000018818	tarbp2	100	65.574	ENSTTRG00000017177	TARBP2	100	64.754	Tursiops_truncatus
ENSSDUG00000018818	tarbp2	100	65.301	ENSUAMG00000009011	TARBP2	100	64.754	Ursus_americanus
ENSSDUG00000018818	tarbp2	100	64.754	ENSUMAG00000010461	TARBP2	100	64.208	Ursus_maritimus
ENSSDUG00000018818	tarbp2	100	64.754	ENSVVUG00000028150	TARBP2	100	66.087	Vulpes_vulpes
ENSSDUG00000018818	tarbp2	97	70.349	ENSXETG00000012644	tarbp2	97	69.767	Xenopus_tropicalis
ENSSDUG00000018818	tarbp2	100	92.754	ENSXMAG00000017836	tarbp2	100	92.754	Xiphophorus_maculatus