EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000018886 (Gene tree)
Gene ID: 111216677
Gene Symbol: frg1
Alias: zgc:112426
Full Name: FSHD region gene 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 12020 bases
Position: chrBDQW01000035.1:3842653-3854672
Accession: 111216677
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000026039	FRG1	PF06229.12	5.4e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000026507	-	2020	XM_022738292	ENSSDUP00000026039	255 (aa)	XP_022594013	UPI000BBEFEC6

Gene Model

Click here to download ENSSDUG00000018886's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000018886's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000018886	frg1	100	70.543	ENSG00000109536	FRG1	100	77.586	Homo_sapiens
ENSSDUG00000018886	frg1	100	90.980	ENSAPOG00000001060	frg1	100	90.980	Acanthochromis_polyacanthus
ENSSDUG00000018886	frg1	100	70.155	ENSAMEG00000013503	FRG1	100	70.155	Ailuropoda_melanoleuca
ENSSDUG00000018886	frg1	87	90.541	ENSACIG00000022283	frg1	100	90.541	Amphilophus_citrinellus
ENSSDUG00000018886	frg1	87	90.541	ENSAOCG00000024240	frg1	87	90.541	Amphiprion_ocellaris
ENSSDUG00000018886	frg1	100	90.980	ENSAPEG00000002486	frg1	100	90.980	Amphiprion_percula
ENSSDUG00000018886	frg1	100	90.588	ENSATEG00000010414	frg1	100	90.588	Anabas_testudineus
ENSSDUG00000018886	frg1	100	72.656	ENSAPLG00000007785	-	100	70.703	Anas_platyrhynchos
ENSSDUG00000018886	frg1	100	74.219	ENSACAG00000006877	-	100	74.219	Anolis_carolinensis
ENSSDUG00000018886	frg1	100	71.984	ENSANAG00000020876	FRG1	100	71.595	Aotus_nancymaae
ENSSDUG00000018886	frg1	100	82.745	ENSACLG00000027065	frg1	100	82.745	Astatotilapia_calliptera
ENSSDUG00000018886	frg1	100	84.375	ENSAMXG00000032700	frg1	100	84.375	Astyanax_mexicanus
ENSSDUG00000018886	frg1	100	70.155	ENSBTAG00000007089	FRG1	100	70.155	Bos_taurus
ENSSDUG00000018886	frg1	99	41.818	WBGene00014177	frg-1	99	42.279	Caenorhabditis_elegans
ENSSDUG00000018886	frg1	100	71.984	ENSCJAG00000011272	FRG1	100	71.595	Callithrix_jacchus
ENSSDUG00000018886	frg1	100	70.155	ENSCAFG00000007135	FRG1	100	70.155	Canis_familiaris
ENSSDUG00000018886	frg1	83	74.057	ENSCAFG00020000082	-	85	74.057	Canis_lupus_dingo
ENSSDUG00000018886	frg1	100	70.155	ENSCHIG00000011585	-	100	70.155	Capra_hircus
ENSSDUG00000018886	frg1	98	51.984	ENSTSYG00000031599	-	100	51.190	Carlito_syrichta
ENSSDUG00000018886	frg1	87	73.094	ENSCAPG00000016056	-	91	73.094	Cavia_aperea
ENSSDUG00000018886	frg1	100	71.595	ENSCPOG00000022277	-	100	71.206	Cavia_porcellus
ENSSDUG00000018886	frg1	100	71.984	ENSCCAG00000024627	FRG1	100	71.595	Cebus_capucinus
ENSSDUG00000018886	frg1	100	70.155	ENSCATG00000029230	FRG1	100	69.380	Cercocebus_atys
ENSSDUG00000018886	frg1	100	57.364	ENSCLAG00000004960	-	100	58.915	Chinchilla_lanigera
ENSSDUG00000018886	frg1	100	52.549	ENSCLAG00000006068	-	100	52.549	Chinchilla_lanigera
ENSSDUG00000018886	frg1	100	71.595	ENSCLAG00000000370	-	100	71.595	Chinchilla_lanigera
ENSSDUG00000018886	frg1	99	50.198	ENSCLAG00000009263	-	100	50.198	Chinchilla_lanigera
ENSSDUG00000018886	frg1	84	69.444	ENSCSAG00000017729	-	100	69.444	Chlorocebus_sabaeus
ENSSDUG00000018886	frg1	100	70.155	ENSCSAG00000002899	FRG1	100	69.380	Chlorocebus_sabaeus
ENSSDUG00000018886	frg1	86	74.545	ENSCPBG00000009211	-	86	74.545	Chrysemys_picta_bellii
ENSSDUG00000018886	frg1	83	51.628	ENSCING00000005161	-	99	47.191	Ciona_intestinalis
ENSSDUG00000018886	frg1	51	56.489	ENSCSAVG00000008018	-	72	56.489	Ciona_savignyi
ENSSDUG00000018886	frg1	100	70.155	ENSCANG00000020991	FRG1	100	69.380	Colobus_angolensis_palliatus
ENSSDUG00000018886	frg1	100	70.543	ENSCGRG00001014998	Frg1	99	71.429	Cricetulus_griseus_chok1gshd
ENSSDUG00000018886	frg1	100	57.977	ENSCGRG00000003902	-	96	58.366	Cricetulus_griseus_crigri
ENSSDUG00000018886	frg1	100	70.543	ENSCGRG00000011860	-	100	69.767	Cricetulus_griseus_crigri
ENSSDUG00000018886	frg1	96	83.607	ENSCSEG00000015950	frg1	100	83.607	Cynoglossus_semilaevis
ENSSDUG00000018886	frg1	100	86.667	ENSCVAG00000009985	frg1	100	86.667	Cyprinodon_variegatus
ENSSDUG00000018886	frg1	100	82.745	ENSDARG00000056504	frg1	100	85.915	Danio_rerio
ENSSDUG00000018886	frg1	100	70.930	ENSDNOG00000014886	FRG1	100	70.930	Dasypus_novemcinctus
ENSSDUG00000018886	frg1	100	61.240	ENSDORG00000016190	Frg1	100	62.016	Dipodomys_ordii
ENSSDUG00000018886	frg1	100	47.529	FBgn0036964	FRG1	100	47.529	Drosophila_melanogaster
ENSSDUG00000018886	frg1	100	68.605	ENSETEG00000012349	-	100	67.829	Echinops_telfairi
ENSSDUG00000018886	frg1	58	55.405	ENSEBUG00000012359	FRG1	89	55.405	Eptatretus_burgeri
ENSSDUG00000018886	frg1	100	71.595	ENSEASG00005017497	FRG1	100	71.984	Equus_asinus_asinus
ENSSDUG00000018886	frg1	100	71.595	ENSECAG00000003122	FRG1	100	71.984	Equus_caballus
ENSSDUG00000018886	frg1	62	73.248	ENSEEUG00000000145	-	100	73.248	Erinaceus_europaeus
ENSSDUG00000018886	frg1	100	82.745	ENSELUG00000021712	frg1	100	82.745	Esox_lucius
ENSSDUG00000018886	frg1	100	70.155	ENSFCAG00000025737	FRG1	100	70.155	Felis_catus
ENSSDUG00000018886	frg1	87	71.622	ENSFALG00000011231	-	87	71.622	Ficedula_albicollis
ENSSDUG00000018886	frg1	100	71.595	ENSFDAG00000000962	-	100	70.817	Fukomys_damarensis
ENSSDUG00000018886	frg1	100	60.385	ENSFDAG00000012697	-	98	66.822	Fukomys_damarensis
ENSSDUG00000018886	frg1	100	84.706	ENSFHEG00000010540	frg1	100	84.706	Fundulus_heteroclitus
ENSSDUG00000018886	frg1	100	81.569	ENSGMOG00000000867	frg1	100	81.569	Gadus_morhua
ENSSDUG00000018886	frg1	100	72.656	ENSGALG00000013590	-	100	73.047	Gallus_gallus
ENSSDUG00000018886	frg1	81	84.058	ENSGAFG00000013855	frg1	100	84.058	Gambusia_affinis
ENSSDUG00000018886	frg1	100	87.843	ENSGACG00000016888	frg1	100	87.843	Gasterosteus_aculeatus
ENSSDUG00000018886	frg1	100	73.047	ENSGAGG00000025012	-	100	71.094	Gopherus_agassizii
ENSSDUG00000018886	frg1	100	44.487	ENSGGOG00000040796	-	100	43.726	Gorilla_gorilla
ENSSDUG00000018886	frg1	68	68.000	ENSGGOG00000012888	-	88	68.391	Gorilla_gorilla
ENSSDUG00000018886	frg1	100	89.804	ENSHBUG00000010667	frg1	100	89.804	Haplochromis_burtoni
ENSSDUG00000018886	frg1	99	69.141	ENSHGLG00000020402	-	94	68.750	Heterocephalus_glaber_female
ENSSDUG00000018886	frg1	100	61.719	ENSHGLG00000001211	-	100	62.109	Heterocephalus_glaber_female
ENSSDUG00000018886	frg1	100	71.984	ENSHGLG00000005601	FRG1	100	71.595	Heterocephalus_glaber_female
ENSSDUG00000018886	frg1	99	68.359	ENSHGLG00000020943	-	99	67.969	Heterocephalus_glaber_female
ENSSDUG00000018886	frg1	99	68.359	ENSHGLG00100021211	-	99	67.969	Heterocephalus_glaber_male
ENSSDUG00000018886	frg1	100	62.109	ENSHGLG00100010674	-	100	62.500	Heterocephalus_glaber_male
ENSSDUG00000018886	frg1	100	72.374	ENSHGLG00100016261	-	100	71.984	Heterocephalus_glaber_male
ENSSDUG00000018886	frg1	100	57.422	ENSHGLG00100015285	-	100	56.250	Heterocephalus_glaber_male
ENSSDUG00000018886	frg1	88	81.778	ENSHCOG00000000224	frg1	96	81.778	Hippocampus_comes
ENSSDUG00000018886	frg1	100	78.988	ENSIPUG00000022716	frg1	100	78.988	Ictalurus_punctatus
ENSSDUG00000018886	frg1	100	71.318	ENSSTOG00000002857	-	100	71.318	Ictidomys_tridecemlineatus
ENSSDUG00000018886	frg1	100	70.543	ENSJJAG00000020625	Frg1	100	70.543	Jaculus_jaculus
ENSSDUG00000018886	frg1	100	85.882	ENSKMAG00000005841	frg1	100	85.882	Kryptolebias_marmoratus
ENSSDUG00000018886	frg1	100	88.235	ENSLBEG00000001466	frg1	100	88.235	Labrus_bergylta
ENSSDUG00000018886	frg1	100	63.602	ENSLACG00000010243	frg1	100	63.602	Latimeria_chalumnae
ENSSDUG00000018886	frg1	100	81.176	ENSLOCG00000013868	frg1	100	81.176	Lepisosteus_oculatus
ENSSDUG00000018886	frg1	100	70.155	ENSLAFG00000011191	FRG1	100	70.155	Loxodonta_africana
ENSSDUG00000018886	frg1	100	70.155	ENSMFAG00000031178	FRG1	100	69.380	Macaca_fascicularis
ENSSDUG00000018886	frg1	83	63.551	ENSMFAG00000042873	-	89	63.551	Macaca_fascicularis
ENSSDUG00000018886	frg1	100	70.155	ENSMMUG00000001824	FRG1	100	69.380	Macaca_mulatta
ENSSDUG00000018886	frg1	78	63.547	ENSMMUG00000047496	-	87	63.547	Macaca_mulatta
ENSSDUG00000018886	frg1	96	65.587	ENSMNEG00000018620	FRG1	100	64.777	Macaca_nemestrina
ENSSDUG00000018886	frg1	100	70.155	ENSMLEG00000028881	FRG1	100	69.380	Mandrillus_leucophaeus
ENSSDUG00000018886	frg1	100	90.196	ENSMAMG00000012406	frg1	100	90.196	Mastacembelus_armatus
ENSSDUG00000018886	frg1	100	89.412	ENSMZEG00005007549	frg1	100	89.412	Maylandia_zebra
ENSSDUG00000018886	frg1	100	73.047	ENSMGAG00000011481	-	100	73.438	Meleagris_gallopavo
ENSSDUG00000018886	frg1	100	70.543	ENSMAUG00000000847	Frg1	100	69.767	Mesocricetus_auratus
ENSSDUG00000018886	frg1	100	70.930	ENSMICG00000046816	FRG1	100	70.155	Microcebus_murinus
ENSSDUG00000018886	frg1	100	64.981	ENSMOCG00000023000	Frg1	100	65.759	Microtus_ochrogaster
ENSSDUG00000018886	frg1	88	85.268	ENSMMOG00000004008	frg1	95	85.268	Mola_mola
ENSSDUG00000018886	frg1	100	70.155	ENSMODG00000019031	-	87	70.543	Monodelphis_domestica
ENSSDUG00000018886	frg1	100	88.235	ENSMALG00000018497	frg1	100	88.235	Monopterus_albus
ENSSDUG00000018886	frg1	100	70.155	MGP_CAROLIEiJ_G0031006	Frg1	100	69.380	Mus_caroli
ENSSDUG00000018886	frg1	100	70.155	ENSMUSG00000031590	Frg1	100	69.380	Mus_musculus
ENSSDUG00000018886	frg1	100	70.543	MGP_PahariEiJ_G0021475	Frg1	100	69.767	Mus_pahari
ENSSDUG00000018886	frg1	100	69.767	MGP_SPRETEiJ_G0032120	Frg1	100	68.992	Mus_spretus
ENSSDUG00000018886	frg1	100	70.155	ENSMPUG00000017962	FRG1	100	70.155	Mustela_putorius_furo
ENSSDUG00000018886	frg1	100	71.984	ENSMLUG00000023179	FRG1	100	71.984	Myotis_lucifugus
ENSSDUG00000018886	frg1	100	70.543	ENSNGAG00000016411	Frg1	100	69.767	Nannospalax_galili
ENSSDUG00000018886	frg1	81	82.126	ENSNBRG00000006806	frg1	95	82.126	Neolamprologus_brichardi
ENSSDUG00000018886	frg1	100	52.344	ENSNLEG00000032846	-	100	61.607	Nomascus_leucogenys
ENSSDUG00000018886	frg1	100	60.465	ENSNLEG00000032333	-	100	60.465	Nomascus_leucogenys
ENSSDUG00000018886	frg1	100	64.368	ENSNLEG00000035849	-	100	63.985	Nomascus_leucogenys
ENSSDUG00000018886	frg1	78	64.677	ENSNLEG00000028874	-	91	64.677	Nomascus_leucogenys
ENSSDUG00000018886	frg1	78	65.672	ENSNLEG00000036059	-	86	65.672	Nomascus_leucogenys
ENSSDUG00000018886	frg1	100	70.817	ENSNLEG00000000930	FRG1	100	71.595	Nomascus_leucogenys
ENSSDUG00000018886	frg1	60	71.711	ENSMEUG00000007509	-	59	71.711	Notamacropus_eugenii
ENSSDUG00000018886	frg1	100	61.240	ENSOPRG00000004722	-	100	61.240	Ochotona_princeps
ENSSDUG00000018886	frg1	100	55.469	ENSODEG00000006953	-	100	54.688	Octodon_degus
ENSSDUG00000018886	frg1	100	71.595	ENSODEG00000006458	-	100	71.595	Octodon_degus
ENSSDUG00000018886	frg1	100	89.453	ENSONIG00000010162	frg1	100	89.453	Oreochromis_niloticus
ENSSDUG00000018886	frg1	71	71.111	ENSOANG00000005659	-	80	71.111	Ornithorhynchus_anatinus
ENSSDUG00000018886	frg1	100	70.155	ENSOCUG00000009038	-	100	69.380	Oryctolagus_cuniculus
ENSSDUG00000018886	frg1	96	82.787	ENSORLG00000008106	frg1	89	82.787	Oryzias_latipes
ENSSDUG00000018886	frg1	100	83.529	ENSORLG00020014355	frg1	100	83.529	Oryzias_latipes_hni
ENSSDUG00000018886	frg1	100	83.137	ENSORLG00015014159	frg1	100	83.137	Oryzias_latipes_hsok
ENSSDUG00000018886	frg1	85	81.019	ENSOMEG00000002468	frg1	89	81.019	Oryzias_melastigma
ENSSDUG00000018886	frg1	100	70.155	ENSOGAG00000005749	-	100	70.155	Otolemur_garnettii
ENSSDUG00000018886	frg1	100	68.966	ENSOARG00000008592	FRG1	100	68.966	Ovis_aries
ENSSDUG00000018886	frg1	84	71.296	ENSPPAG00000043170	-	100	71.296	Pan_paniscus
ENSSDUG00000018886	frg1	96	54.054	ENSPPAG00000043174	-	100	53.150	Pan_paniscus
ENSSDUG00000018886	frg1	100	70.039	ENSPPRG00000019777	-	100	69.650	Panthera_pardus
ENSSDUG00000018886	frg1	100	69.767	ENSPPRG00000025003	-	100	69.767	Panthera_pardus
ENSSDUG00000018886	frg1	100	70.428	ENSPTIG00000006566	-	100	70.039	Panthera_tigris_altaica
ENSSDUG00000018886	frg1	100	69.767	ENSPTIG00000006588	-	100	69.767	Panthera_tigris_altaica
ENSSDUG00000018886	frg1	95	57.551	ENSPTRG00000052363	-	97	61.538	Pan_troglodytes
ENSSDUG00000018886	frg1	100	70.543	ENSPTRG00000050205	-	100	69.767	Pan_troglodytes
ENSSDUG00000018886	frg1	96	57.085	ENSPTRG00000050204	-	100	57.085	Pan_troglodytes
ENSSDUG00000018886	frg1	100	70.543	ENSPTRG00000016671	-	100	69.767	Pan_troglodytes
ENSSDUG00000018886	frg1	88	62.609	ENSPTRG00000043123	-	94	61.373	Pan_troglodytes
ENSSDUG00000018886	frg1	96	57.895	ENSPTRG00000044710	-	100	57.895	Pan_troglodytes
ENSSDUG00000018886	frg1	69	65.000	ENSPANG00000031530	-	84	65.000	Papio_anubis
ENSSDUG00000018886	frg1	100	75.781	ENSPKIG00000024189	frg1	100	76.953	Paramormyrops_kingsleyae
ENSSDUG00000018886	frg1	84	74.884	ENSPSIG00000017971	-	82	74.884	Pelodiscus_sinensis
ENSSDUG00000018886	frg1	98	75.397	ENSPMGG00000019273	frg1	100	75.502	Periophthalmus_magnuspinnatus
ENSSDUG00000018886	frg1	100	70.543	ENSPEMG00000000650	Frg1	100	69.767	Peromyscus_maniculatus_bairdii
ENSSDUG00000018886	frg1	100	70.155	ENSPCIG00000007530	-	69	70.155	Phascolarctos_cinereus
ENSSDUG00000018886	frg1	100	86.667	ENSPFOG00000006721	frg1	100	86.667	Poecilia_formosa
ENSSDUG00000018886	frg1	100	86.667	ENSPMEG00000013816	frg1	100	86.667	Poecilia_mexicana
ENSSDUG00000018886	frg1	100	86.275	ENSPREG00000000097	frg1	100	86.275	Poecilia_reticulata
ENSSDUG00000018886	frg1	62	67.089	ENSPPYG00000011275	-	87	67.089	Pongo_abelii
ENSSDUG00000018886	frg1	56	75.172	ENSPPYG00000029810	-	100	75.172	Pongo_abelii
ENSSDUG00000018886	frg1	95	68.293	ENSPCAG00000014953	-	100	67.886	Procavia_capensis
ENSSDUG00000018886	frg1	79	58.333	ENSPCOG00000022726	FRG1	95	58.333	Propithecus_coquereli
ENSSDUG00000018886	frg1	100	56.977	ENSPVAG00000010551	FRG1	100	56.977	Pteropus_vampyrus
ENSSDUG00000018886	frg1	67	90.116	ENSPNYG00000015209	frg1	74	90.116	Pundamilia_nyererei
ENSSDUG00000018886	frg1	100	78.295	ENSPNAG00000013259	frg1	100	76.357	Pygocentrus_nattereri
ENSSDUG00000018886	frg1	100	70.155	ENSRNOG00000009846	Frg1	100	69.380	Rattus_norvegicus
ENSSDUG00000018886	frg1	87	70.089	ENSRBIG00000042219	-	94	69.778	Rhinopithecus_bieti
ENSSDUG00000018886	frg1	82	66.825	ENSRROG00000032084	-	88	66.825	Rhinopithecus_roxellana
ENSSDUG00000018886	frg1	100	68.217	ENSRROG00000015523	FRG1	100	67.442	Rhinopithecus_roxellana
ENSSDUG00000018886	frg1	100	72.374	ENSSBOG00000034175	FRG1	100	71.984	Saimiri_boliviensis_boliviensis
ENSSDUG00000018886	frg1	100	69.767	ENSSHAG00000005886	-	100	69.767	Sarcophilus_harrisii
ENSSDUG00000018886	frg1	97	76.613	ENSSFOG00015021361	frg1	99	77.823	Scleropages_formosus
ENSSDUG00000018886	frg1	100	86.667	ENSSMAG00000001213	frg1	100	86.667	Scophthalmus_maximus
ENSSDUG00000018886	frg1	100	99.216	ENSSLDG00000024191	frg1	100	99.216	Seriola_lalandi_dorsalis
ENSSDUG00000018886	frg1	65	75.595	ENSSARG00000002471	-	93	74.713	Sorex_araneus
ENSSDUG00000018886	frg1	100	69.202	ENSSPUG00000017326	-	99	71.963	Sphenodon_punctatus
ENSSDUG00000018886	frg1	100	84.706	ENSSPAG00000013294	frg1	100	84.706	Stegastes_partitus
ENSSDUG00000018886	frg1	100	70.543	ENSSSCG00000006996	FRG1	100	70.543	Sus_scrofa
ENSSDUG00000018886	frg1	100	71.875	ENSTGUG00000007028	-	100	70.312	Taeniopygia_guttata
ENSSDUG00000018886	frg1	100	83.922	ENSTRUG00000016208	frg1	100	83.922	Takifugu_rubripes
ENSSDUG00000018886	frg1	100	83.529	ENSTNIG00000007128	frg1	100	83.529	Tetraodon_nigroviridis
ENSSDUG00000018886	frg1	83	51.185	ENSTBEG00000012789	-	99	51.185	Tupaia_belangeri
ENSSDUG00000018886	frg1	78	46.970	ENSTBEG00000017605	-	99	46.970	Tupaia_belangeri
ENSSDUG00000018886	frg1	100	69.767	ENSTBEG00000014491	-	100	68.992	Tupaia_belangeri
ENSSDUG00000018886	frg1	100	69.767	ENSTTRG00000003429	FRG1	100	69.767	Tursiops_truncatus
ENSSDUG00000018886	frg1	96	68.293	ENSUAMG00000012123	-	100	67.347	Ursus_americanus
ENSSDUG00000018886	frg1	100	70.155	ENSUMAG00000021119	FRG1	100	70.155	Ursus_maritimus
ENSSDUG00000018886	frg1	87	73.543	ENSVPAG00000011977	-	94	73.543	Vicugna_pacos
ENSSDUG00000018886	frg1	100	68.605	ENSVPAG00000000616	FRG1	100	68.605	Vicugna_pacos
ENSSDUG00000018886	frg1	83	74.057	ENSVVUG00000007181	-	77	74.057	Vulpes_vulpes
ENSSDUG00000018886	frg1	100	71.206	ENSXETG00000012470	frg1	100	71.484	Xenopus_tropicalis
ENSSDUG00000018886	frg1	100	81.176	ENSXCOG00000005312	frg1	100	81.176	Xiphophorus_couchianus
ENSSDUG00000018886	frg1	100	86.667	ENSXMAG00000007751	frg1	100	86.667	Xiphophorus_maculatus