EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000018908 (Gene tree)
Gene ID: 111234256
Gene Symbol: srsf9
Alias: zgc:77449
Full Name: serine/arginine-rich splicing factor 9-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 4772 bases
Position: chrBDQW01000442.1:1574761-1579532
Accession: 111234256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000026064	RRM_1	PF00076.22	2.7e-30	1	2
ENSSDUP00000026064	RRM_1	PF00076.22	2.7e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000026531	-	2125	XM_022762227	ENSSDUP00000026064	249 (aa)	XP_022617948	UPI000BBF223C

Gene Model

Click here to download ENSSDUG00000018908's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03040	Spliceosome	KEGG
sdu05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000018908's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000018908	srsf9	73	65.385	ENSSDUG00000003929	-	92	57.778
ENSSDUG00000018908	srsf9	73	40.933	ENSSDUG00000016097	srsf6a	52	41.753
ENSSDUG00000018908	srsf9	68	42.541	ENSSDUG00000005766	srsf5b	61	41.111
ENSSDUG00000018908	srsf9	73	67.526	ENSSDUG00000003887	-	74	67.179
ENSSDUG00000018908	srsf9	74	38.342	ENSSDUG00000006103	srsf5a	73	39.535
ENSSDUG00000018908	srsf9	73	70.166	ENSSDUG00000011303	-	77	70.718
ENSSDUG00000018908	srsf9	73	43.478	ENSSDUG00000007387	srsf4	53	41.176

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000018908	srsf9	89	65.158	ENSG00000111786	SRSF9	94	63.801	Homo_sapiens
ENSSDUG00000018908	srsf9	100	95.181	ENSAPOG00000013728	srsf9	100	95.181	Acanthochromis_polyacanthus
ENSSDUG00000018908	srsf9	89	65.766	ENSAMEG00000013294	SRSF9	96	63.801	Ailuropoda_melanoleuca
ENSSDUG00000018908	srsf9	92	90.000	ENSACIG00000015765	srsf9	87	88.938	Amphilophus_citrinellus
ENSSDUG00000018908	srsf9	100	94.378	ENSAOCG00000002992	srsf9	100	94.378	Amphiprion_ocellaris
ENSSDUG00000018908	srsf9	100	94.378	ENSAPEG00000011908	srsf9	100	94.378	Amphiprion_percula
ENSSDUG00000018908	srsf9	100	96.386	ENSATEG00000019984	srsf9	100	96.386	Anabas_testudineus
ENSSDUG00000018908	srsf9	88	66.210	ENSACAG00000002877	SRSF9	86	63.063	Anolis_carolinensis
ENSSDUG00000018908	srsf9	89	64.706	ENSANAG00000035910	SRSF9	91	64.623	Aotus_nancymaae
ENSSDUG00000018908	srsf9	92	86.957	ENSACLG00000015678	srsf9	87	87.168	Astatotilapia_calliptera
ENSSDUG00000018908	srsf9	100	89.558	ENSAMXG00000032281	srsf9	90	88.393	Astyanax_mexicanus
ENSSDUG00000018908	srsf9	89	64.706	ENSBTAG00000012792	SRSF9	94	63.348	Bos_taurus
ENSSDUG00000018908	srsf9	85	66.038	ENSBTAG00000005584	-	90	64.623	Bos_taurus
ENSSDUG00000018908	srsf9	89	65.158	ENSCJAG00000001187	SRSF9	94	63.801	Callithrix_jacchus
ENSSDUG00000018908	srsf9	89	65.766	ENSCAFG00000010314	SRSF9	94	63.801	Canis_familiaris
ENSSDUG00000018908	srsf9	89	65.766	ENSCAFG00020020612	SRSF9	94	63.801	Canis_lupus_dingo
ENSSDUG00000018908	srsf9	89	64.706	ENSCHIG00000025274	SRSF9	94	63.348	Capra_hircus
ENSSDUG00000018908	srsf9	89	54.054	ENSTSYG00000029305	-	92	50.000	Carlito_syrichta
ENSSDUG00000018908	srsf9	88	60.274	ENSTSYG00000034124	-	92	54.955	Carlito_syrichta
ENSSDUG00000018908	srsf9	89	59.910	ENSTSYG00000036169	-	93	55.405	Carlito_syrichta
ENSSDUG00000018908	srsf9	89	65.766	ENSTSYG00000006848	-	94	63.801	Carlito_syrichta
ENSSDUG00000018908	srsf9	89	65.158	ENSCPOG00000033486	SRSF9	94	63.801	Cavia_porcellus
ENSSDUG00000018908	srsf9	89	65.158	ENSCCAG00000036053	SRSF9	94	63.801	Cebus_capucinus
ENSSDUG00000018908	srsf9	75	58.602	ENSCATG00000000421	-	88	56.452	Cercocebus_atys
ENSSDUG00000018908	srsf9	89	65.158	ENSCATG00000021315	SRSF9	94	63.801	Cercocebus_atys
ENSSDUG00000018908	srsf9	89	65.158	ENSCLAG00000012289	SRSF9	94	63.801	Chinchilla_lanigera
ENSSDUG00000018908	srsf9	89	65.158	ENSCSAG00000002257	SRSF9	94	63.801	Chlorocebus_sabaeus
ENSSDUG00000018908	srsf9	68	61.988	ENSCHOG00000009241	SRSF9	94	59.006	Choloepus_hoffmanni
ENSSDUG00000018908	srsf9	88	66.210	ENSCPBG00000011340	SRSF9	90	66.063	Chrysemys_picta_bellii
ENSSDUG00000018908	srsf9	86	63.380	ENSCANG00000034161	SRSF9	90	62.441	Colobus_angolensis_palliatus
ENSSDUG00000018908	srsf9	89	65.766	ENSCGRG00001021965	Srsf9	94	63.348	Cricetulus_griseus_chok1gshd
ENSSDUG00000018908	srsf9	100	89.286	ENSCSEG00000015663	srsf9	92	90.830	Cynoglossus_semilaevis
ENSSDUG00000018908	srsf9	100	84.337	ENSCVAG00000021417	srsf9	91	83.186	Cyprinodon_variegatus
ENSSDUG00000018908	srsf9	100	87.952	ENSDARG00000008097	srsf9	90	88.393	Danio_rerio
ENSSDUG00000018908	srsf9	89	65.158	ENSDNOG00000012598	SRSF9	94	63.801	Dasypus_novemcinctus
ENSSDUG00000018908	srsf9	89	65.766	ENSDORG00000013162	Srsf9	94	63.348	Dipodomys_ordii
ENSSDUG00000018908	srsf9	89	52.252	ENSETEG00000002606	SRSF9	75	67.347	Echinops_telfairi
ENSSDUG00000018908	srsf9	89	65.158	ENSEASG00005004727	SRSF9	94	63.801	Equus_asinus_asinus
ENSSDUG00000018908	srsf9	89	65.158	ENSECAG00000009116	SRSF9	94	63.801	Equus_caballus
ENSSDUG00000018908	srsf9	63	80.000	ENSEEUG00000011655	SRSF9	70	80.000	Erinaceus_europaeus
ENSSDUG00000018908	srsf9	100	78.740	ENSELUG00000012644	SRSF9	88	79.736	Esox_lucius
ENSSDUG00000018908	srsf9	94	84.681	ENSELUG00000021669	srsf9	91	83.700	Esox_lucius
ENSSDUG00000018908	srsf9	89	65.766	ENSFCAG00000011011	SRSF9	94	63.801	Felis_catus
ENSSDUG00000018908	srsf9	100	85.600	ENSFHEG00000020851	srsf9	92	84.141	Fundulus_heteroclitus
ENSSDUG00000018908	srsf9	100	85.039	ENSGMOG00000007980	srsf9	92	85.281	Gadus_morhua
ENSSDUG00000018908	srsf9	89	88.688	ENSGAFG00000009123	srsf9	100	87.330	Gambusia_affinis
ENSSDUG00000018908	srsf9	95	93.004	ENSGACG00000016921	srsf9	95	90.947	Gasterosteus_aculeatus
ENSSDUG00000018908	srsf9	88	65.753	ENSGAGG00000016015	SRSF9	90	65.611	Gopherus_agassizii
ENSSDUG00000018908	srsf9	69	60.234	ENSGGOG00000027142	-	95	50.467	Gorilla_gorilla
ENSSDUG00000018908	srsf9	92	86.957	ENSHBUG00000019320	srsf9	90	87.168	Haplochromis_burtoni
ENSSDUG00000018908	srsf9	80	61.111	ENSHGLG00000003582	-	91	56.716	Heterocephalus_glaber_female
ENSSDUG00000018908	srsf9	89	65.158	ENSHGLG00000014372	SRSF9	94	63.801	Heterocephalus_glaber_female
ENSSDUG00000018908	srsf9	89	65.158	ENSHGLG00100013695	SRSF9	94	63.801	Heterocephalus_glaber_male
ENSSDUG00000018908	srsf9	79	61.735	ENSHGLG00100015198	-	89	59.296	Heterocephalus_glaber_male
ENSSDUG00000018908	srsf9	100	71.146	ENSHCOG00000017311	srsf9	92	69.737	Hippocampus_comes
ENSSDUG00000018908	srsf9	100	86.747	ENSIPUG00000005511	srsf9	90	87.054	Ictalurus_punctatus
ENSSDUG00000018908	srsf9	89	65.158	ENSSTOG00000007344	SRSF9	94	63.801	Ictidomys_tridecemlineatus
ENSSDUG00000018908	srsf9	89	64.865	ENSJJAG00000013374	Srsf9	80	69.355	Jaculus_jaculus
ENSSDUG00000018908	srsf9	91	86.784	ENSKMAG00000007113	srsf9	91	86.344	Kryptolebias_marmoratus
ENSSDUG00000018908	srsf9	100	89.600	ENSLBEG00000017430	srsf9	92	86.475	Labrus_bergylta
ENSSDUG00000018908	srsf9	89	69.369	ENSLACG00000018228	SRSF9	94	73.874	Latimeria_chalumnae
ENSSDUG00000018908	srsf9	100	80.080	ENSLOCG00000004044	srsf9	87	86.607	Lepisosteus_oculatus
ENSSDUG00000018908	srsf9	74	60.326	ENSLAFG00000006381	SRSF9	97	59.239	Loxodonta_africana
ENSSDUG00000018908	srsf9	80	62.814	ENSMFAG00000039423	SRSF9	99	61.809	Macaca_fascicularis
ENSSDUG00000018908	srsf9	88	62.100	ENSMMUG00000016494	SRSF9	69	61.905	Macaca_mulatta
ENSSDUG00000018908	srsf9	75	60.215	ENSMMUG00000040941	-	86	59.140	Macaca_mulatta
ENSSDUG00000018908	srsf9	89	65.158	ENSMNEG00000044129	SRSF9	94	63.801	Macaca_nemestrina
ENSSDUG00000018908	srsf9	88	64.545	ENSMLEG00000041155	SRSF9	99	63.636	Mandrillus_leucophaeus
ENSSDUG00000018908	srsf9	100	95.181	ENSMAMG00000011581	srsf9	100	95.181	Mastacembelus_armatus
ENSSDUG00000018908	srsf9	92	86.957	ENSMZEG00005018422	srsf9	87	87.168	Maylandia_zebra
ENSSDUG00000018908	srsf9	89	65.315	ENSMAUG00000011403	Srsf9	94	62.896	Mesocricetus_auratus
ENSSDUG00000018908	srsf9	89	64.706	ENSMICG00000008674	SRSF9	94	63.348	Microcebus_murinus
ENSSDUG00000018908	srsf9	84	66.667	ENSMOCG00000021163	Srsf9	90	64.151	Microtus_ochrogaster
ENSSDUG00000018908	srsf9	94	91.880	ENSMMOG00000009349	srsf9	89	92.735	Mola_mola
ENSSDUG00000018908	srsf9	88	61.818	ENSMODG00000003146	SRSF9	93	66.197	Monodelphis_domestica
ENSSDUG00000018908	srsf9	100	94.163	ENSMALG00000011678	srsf9	100	94.163	Monopterus_albus
ENSSDUG00000018908	srsf9	89	66.216	MGP_CAROLIEiJ_G0027622	Srsf9	93	63.348	Mus_caroli
ENSSDUG00000018908	srsf9	89	66.216	ENSMUSG00000029538	Srsf9	93	63.348	Mus_musculus
ENSSDUG00000018908	srsf9	89	66.216	MGP_SPRETEiJ_G0028620	Srsf9	93	63.348	Mus_spretus
ENSSDUG00000018908	srsf9	89	65.179	ENSMPUG00000003193	SRSF9	93	64.574	Mustela_putorius_furo
ENSSDUG00000018908	srsf9	89	64.126	ENSMLUG00000010346	SRSF9	93	64.126	Myotis_lucifugus
ENSSDUG00000018908	srsf9	89	64.865	ENSNGAG00000012738	Srsf9	80	68.817	Nannospalax_galili
ENSSDUG00000018908	srsf9	92	86.957	ENSNBRG00000003888	srsf9	90	87.168	Neolamprologus_brichardi
ENSSDUG00000018908	srsf9	82	62.136	ENSNLEG00000033316	-	94	54.762	Nomascus_leucogenys
ENSSDUG00000018908	srsf9	89	65.158	ENSNLEG00000015661	SRSF9	94	63.801	Nomascus_leucogenys
ENSSDUG00000018908	srsf9	62	71.613	ENSMEUG00000004069	SRSF9	92	72.258	Notamacropus_eugenii
ENSSDUG00000018908	srsf9	89	65.315	ENSOPRG00000004234	SRSF9	94	63.348	Ochotona_princeps
ENSSDUG00000018908	srsf9	95	87.288	ENSONIG00000013974	srsf9	91	87.168	Oreochromis_niloticus
ENSSDUG00000018908	srsf9	89	64.706	ENSOCUG00000024603	SRSF9	94	63.348	Oryctolagus_cuniculus
ENSSDUG00000018908	srsf9	100	83.936	ENSORLG00000023709	srsf9	91	85.398	Oryzias_latipes
ENSSDUG00000018908	srsf9	100	83.936	ENSORLG00020017678	srsf9	91	85.398	Oryzias_latipes_hni
ENSSDUG00000018908	srsf9	100	83.936	ENSORLG00015004857	srsf9	91	85.398	Oryzias_latipes_hsok
ENSSDUG00000018908	srsf9	100	84.739	ENSOMEG00000002601	srsf9	91	86.283	Oryzias_melastigma
ENSSDUG00000018908	srsf9	89	65.158	ENSOGAG00000003852	SRSF9	93	63.801	Otolemur_garnettii
ENSSDUG00000018908	srsf9	97	58.607	ENSOARG00000012402	SRSF9	94	62.273	Ovis_aries
ENSSDUG00000018908	srsf9	86	63.551	ENSPPAG00000034420	SRSF9	82	63.415	Pan_paniscus
ENSSDUG00000018908	srsf9	89	65.766	ENSPPRG00000001309	SRSF9	94	63.801	Panthera_pardus
ENSSDUG00000018908	srsf9	68	60.819	ENSPTIG00000010327	SRSF9	67	59.006	Panthera_tigris_altaica
ENSSDUG00000018908	srsf9	89	65.158	ENSPTRG00000005535	SRSF9	94	63.801	Pan_troglodytes
ENSSDUG00000018908	srsf9	89	65.158	ENSPANG00000016072	SRSF9	94	63.801	Papio_anubis
ENSSDUG00000018908	srsf9	100	81.275	ENSPKIG00000023787	srsf9	91	85.088	Paramormyrops_kingsleyae
ENSSDUG00000018908	srsf9	86	88.785	ENSPKIG00000024851	SRSF9	85	86.161	Paramormyrops_kingsleyae
ENSSDUG00000018908	srsf9	100	74.603	ENSPMGG00000016215	srsf9	91	75.109	Periophthalmus_magnuspinnatus
ENSSDUG00000018908	srsf9	85	66.667	ENSPEMG00000016311	Srsf9	90	63.679	Peromyscus_maniculatus_bairdii
ENSSDUG00000018908	srsf9	88	65.909	ENSPCIG00000025998	SRSF9	85	66.364	Phascolarctos_cinereus
ENSSDUG00000018908	srsf9	85	89.302	ENSPFOG00000019792	srsf9	91	88.210	Poecilia_formosa
ENSSDUG00000018908	srsf9	85	88.372	ENSPLAG00000022740	srsf9	91	87.336	Poecilia_latipinna
ENSSDUG00000018908	srsf9	85	88.837	ENSPMEG00000008809	srsf9	91	87.773	Poecilia_mexicana
ENSSDUG00000018908	srsf9	85	85.321	ENSPREG00000013165	srsf9	88	83.190	Poecilia_reticulata
ENSSDUG00000018908	srsf9	89	65.158	ENSPPYG00000005031	-	94	63.801	Pongo_abelii
ENSSDUG00000018908	srsf9	85	65.094	ENSPPYG00000019910	-	90	63.679	Pongo_abelii
ENSSDUG00000018908	srsf9	89	62.443	ENSPPYG00000029896	-	94	61.086	Pongo_abelii
ENSSDUG00000018908	srsf9	68	59.412	ENSPCAG00000013889	SRSF9	79	65.926	Procavia_capensis
ENSSDUG00000018908	srsf9	89	64.706	ENSPCOG00000015115	SRSF9	94	63.348	Propithecus_coquereli
ENSSDUG00000018908	srsf9	89	65.158	ENSPVAG00000002229	SRSF9	94	63.801	Pteropus_vampyrus
ENSSDUG00000018908	srsf9	92	86.957	ENSPNYG00000008644	srsf9	90	87.168	Pundamilia_nyererei
ENSSDUG00000018908	srsf9	100	85.141	ENSPNAG00000003588	srsf9	90	86.607	Pygocentrus_nattereri
ENSSDUG00000018908	srsf9	89	66.667	ENSRNOG00000001163	Srsf9	94	63.348	Rattus_norvegicus
ENSSDUG00000018908	srsf9	65	60.248	ENSRBIG00000042683	SRSF9	81	59.006	Rhinopithecus_bieti
ENSSDUG00000018908	srsf9	80	54.000	ENSRROG00000041980	SRSF9	96	54.404	Rhinopithecus_roxellana
ENSSDUG00000018908	srsf9	68	60.234	ENSSHAG00000005685	SRSF9	94	56.707	Sarcophilus_harrisii
ENSSDUG00000018908	srsf9	100	86.905	ENSSFOG00015002476	SRSF9	91	83.772	Scleropages_formosus
ENSSDUG00000018908	srsf9	100	83.665	ENSSFOG00015017303	srsf9	91	86.842	Scleropages_formosus
ENSSDUG00000018908	srsf9	88	88.235	ENSSMAG00000002039	srsf9	86	84.615	Scophthalmus_maximus
ENSSDUG00000018908	srsf9	100	100.000	ENSSLDG00000012305	srsf9	100	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000018908	srsf9	68	60.819	ENSSARG00000003434	SRSF9	99	58.235	Sorex_araneus
ENSSDUG00000018908	srsf9	88	67.890	ENSSPUG00000015680	SRSF9	88	66.055	Sphenodon_punctatus
ENSSDUG00000018908	srsf9	100	97.590	ENSSPAG00000006285	srsf9	100	97.590	Stegastes_partitus
ENSSDUG00000018908	srsf9	69	57.310	ENSSSCG00000038585	-	89	49.708	Sus_scrofa
ENSSDUG00000018908	srsf9	89	65.158	ENSSSCG00000009906	SRSF9	94	63.801	Sus_scrofa
ENSSDUG00000018908	srsf9	100	71.984	ENSTRUG00000012723	srsf9	91	69.658	Takifugu_rubripes
ENSSDUG00000018908	srsf9	94	86.611	ENSTNIG00000000697	srsf9	92	84.783	Tetraodon_nigroviridis
ENSSDUG00000018908	srsf9	84	62.857	ENSTBEG00000008499	SRSF9	84	69.143	Tupaia_belangeri
ENSSDUG00000018908	srsf9	84	62.679	ENSTTRG00000000145	SRSF9	99	61.722	Tursiops_truncatus
ENSSDUG00000018908	srsf9	89	65.158	ENSUAMG00000015527	SRSF9	94	63.801	Ursus_americanus
ENSSDUG00000018908	srsf9	69	56.111	ENSUMAG00000006151	SRSF9	81	51.795	Ursus_maritimus
ENSSDUG00000018908	srsf9	89	65.766	ENSVVUG00000021065	SRSF9	94	63.801	Vulpes_vulpes
ENSSDUG00000018908	srsf9	89	59.193	ENSXETG00000026940	srsf9	92	61.435	Xenopus_tropicalis
ENSSDUG00000018908	srsf9	87	89.352	ENSXMAG00000001438	srsf9	100	87.963	Xiphophorus_maculatus