EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000019071 (Gene tree)
Gene ID: 111238160
Gene Symbol: -
Alias: zgc:101606
Full Name: PR domain zinc finger protein 12-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 10448 bases
Position: chrBDQW01001206.1:6206-16653
Accession: 111238160
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000026323	zf-C2H2	PF00096.26	8e-13	1	2
ENSSDUP00000026323	zf-C2H2	PF00096.26	8e-13	2	2
ENSSDUP00000026344	zf-C2H2	PF00096.26	3.5e-12	1	2
ENSSDUP00000026344	zf-C2H2	PF00096.26	3.5e-12	2	2
ENSSDUP00000026323	zf-met	PF12874.7	6.1e-07	1	1
ENSSDUP00000026344	zf-met	PF12874.7	7.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000026794	-	1059	-	ENSSDUP00000026323	352 (aa)	-	-
ENSSDUT00000026816	-	1128	XM_022767570	ENSSDUP00000026344	375 (aa)	XP_022623291	-

Gene Model

Click here to download ENSSDUG00000019071's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000019071's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000019071	-	51	43.421	ENSSDUG00000005401	-	88	41.818
ENSSDUG00000019071	-	73	42.105	ENSSDUG00000020397	prdm5	98	42.105
ENSSDUG00000019071	-	70	37.500	ENSSDUG00000013311	prdm14	54	41.892
ENSSDUG00000019071	-	51	43.396	ENSSDUG00000007336	-	96	43.396
ENSSDUG00000019071	-	51	43.421	ENSSDUG00000006740	-	52	43.421
ENSSDUG00000019071	-	100	81.633	ENSSDUG00000023498	prdm12b	100	80.612
ENSSDUG00000019071	-	80	41.892	ENSSDUG00000013048	-	51	41.892

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000019071	-	90	83.180	ENSG00000130711	PRDM12	92	81.105	Homo_sapiens
ENSSDUG00000019071	-	100	76.800	ENSAPOG00000018234	-	100	76.800	Acanthochromis_polyacanthus
ENSSDUG00000019071	-	100	82.519	ENSAPOG00000016051	prdm12b	100	82.564	Acanthochromis_polyacanthus
ENSSDUG00000019071	-	90	84.326	ENSAMEG00000016234	PRDM12	99	84.326	Ailuropoda_melanoleuca
ENSSDUG00000019071	-	100	81.558	ENSACIG00000019578	prdm12b	100	81.818	Amphilophus_citrinellus
ENSSDUG00000019071	-	100	86.869	ENSACIG00000005193	-	100	85.570	Amphilophus_citrinellus
ENSSDUG00000019071	-	100	82.124	ENSAOCG00000015040	prdm12b	100	81.654	Amphiprion_ocellaris
ENSSDUG00000019071	-	100	81.606	ENSAPEG00000015092	prdm12b	100	81.137	Amphiprion_percula
ENSSDUG00000019071	-	100	77.694	ENSAPEG00000022849	-	99	77.694	Amphiprion_percula
ENSSDUG00000019071	-	100	93.701	ENSATEG00000014595	-	100	95.013	Anabas_testudineus
ENSSDUG00000019071	-	95	81.105	ENSANAG00000020616	PRDM12	99	81.105	Aotus_nancymaae
ENSSDUG00000019071	-	100	85.112	ENSACLG00000007631	-	100	84.119	Astatotilapia_calliptera
ENSSDUG00000019071	-	100	77.979	ENSACLG00000011876	prdm12b	100	76.943	Astatotilapia_calliptera
ENSSDUG00000019071	-	100	81.201	ENSAMXG00000033665	prdm12b	100	80.940	Astyanax_mexicanus
ENSSDUG00000019071	-	95	84.179	ENSAMXG00000008540	PRDM12	100	77.165	Astyanax_mexicanus
ENSSDUG00000019071	-	90	83.486	ENSBTAG00000023797	PRDM12	94	81.395	Bos_taurus
ENSSDUG00000019071	-	90	83.180	ENSCJAG00000020540	PRDM12	94	81.105	Callithrix_jacchus
ENSSDUG00000019071	-	78	85.211	ENSCAFG00000023076	PRDM12	92	82.724	Canis_familiaris
ENSSDUG00000019071	-	90	83.486	ENSCAFG00020024046	PRDM12	93	81.395	Canis_lupus_dingo
ENSSDUG00000019071	-	90	83.486	ENSCHIG00000025005	PRDM12	94	81.395	Capra_hircus
ENSSDUG00000019071	-	95	79.532	ENSCPOG00000005901	PRDM12	99	79.240	Cavia_porcellus
ENSSDUG00000019071	-	90	83.180	ENSCCAG00000037485	PRDM12	93	81.105	Cebus_capucinus
ENSSDUG00000019071	-	90	83.180	ENSCATG00000020327	PRDM12	93	81.105	Cercocebus_atys
ENSSDUG00000019071	-	90	83.486	ENSCLAG00000005499	PRDM12	88	83.180	Chinchilla_lanigera
ENSSDUG00000019071	-	90	83.180	ENSCSAG00000014756	PRDM12	93	81.105	Chlorocebus_sabaeus
ENSSDUG00000019071	-	100	78.329	ENSCPBG00000022628	PRDM12	96	81.341	Chrysemys_picta_bellii
ENSSDUG00000019071	-	90	83.486	ENSCGRG00001015005	Prdm12	93	81.395	Cricetulus_griseus_chok1gshd
ENSSDUG00000019071	-	100	78.851	ENSCVAG00000017166	prdm12b	100	79.634	Cyprinodon_variegatus
ENSSDUG00000019071	-	100	86.189	ENSCVAG00000000944	-	100	87.023	Cyprinodon_variegatus
ENSSDUG00000019071	-	100	82.507	ENSDARG00000007430	prdm12b	100	81.201	Danio_rerio
ENSSDUG00000019071	-	90	82.927	ENSDNOG00000042302	PRDM12	94	80.870	Dasypus_novemcinctus
ENSSDUG00000019071	-	87	66.667	ENSEBUG00000016780	prdm12b	82	63.388	Eptatretus_burgeri
ENSSDUG00000019071	-	95	81.395	ENSEASG00005008472	PRDM12	94	81.395	Equus_asinus_asinus
ENSSDUG00000019071	-	95	81.395	ENSECAG00000005933	PRDM12	94	81.395	Equus_caballus
ENSSDUG00000019071	-	100	82.199	ENSELUG00000009905	prdm12b	100	80.628	Esox_lucius
ENSSDUG00000019071	-	100	79.896	ENSELUG00000013674	PRDM12	100	79.896	Esox_lucius
ENSSDUG00000019071	-	90	83.486	ENSFCAG00000043086	PRDM12	93	81.395	Felis_catus
ENSSDUG00000019071	-	100	79.474	ENSFALG00000001445	PRDM12	85	82.647	Ficedula_albicollis
ENSSDUG00000019071	-	100	82.090	ENSFHEG00000007746	-	100	81.841	Fundulus_heteroclitus
ENSSDUG00000019071	-	100	79.275	ENSFHEG00000003944	prdm12b	100	79.534	Fundulus_heteroclitus
ENSSDUG00000019071	-	100	78.385	ENSGMOG00000011797	prdm12b	100	78.385	Gadus_morhua
ENSSDUG00000019071	-	100	79.474	ENSGALG00000003895	PRDM12	96	82.647	Gallus_gallus
ENSSDUG00000019071	-	100	79.688	ENSGAFG00000010827	prdm12b	99	79.167	Gambusia_affinis
ENSSDUG00000019071	-	100	79.221	ENSGACG00000016713	prdm12b	99	78.182	Gasterosteus_aculeatus
ENSSDUG00000019071	-	100	78.329	ENSGAGG00000014083	PRDM12	96	81.341	Gopherus_agassizii
ENSSDUG00000019071	-	90	82.875	ENSGGOG00000010568	PRDM12	93	80.814	Gorilla_gorilla
ENSSDUG00000019071	-	100	81.347	ENSHBUG00000022878	prdm12b	100	80.311	Haplochromis_burtoni
ENSSDUG00000019071	-	100	85.112	ENSHBUG00000022537	-	93	85.608	Haplochromis_burtoni
ENSSDUG00000019071	-	90	83.792	ENSHGLG00000013939	PRDM12	93	81.395	Heterocephalus_glaber_female
ENSSDUG00000019071	-	100	74.036	ENSHCOG00000021167	-	92	80.675	Hippocampus_comes
ENSSDUG00000019071	-	89	82.267	ENSHCOG00000003663	prdm12b	100	75.381	Hippocampus_comes
ENSSDUG00000019071	-	100	75.733	ENSIPUG00000019544	PRDM12	100	75.733	Ictalurus_punctatus
ENSSDUG00000019071	-	100	81.771	ENSIPUG00000017053	prdm12b	100	81.723	Ictalurus_punctatus
ENSSDUG00000019071	-	95	81.287	ENSSTOG00000005986	PRDM12	88	80.994	Ictidomys_tridecemlineatus
ENSSDUG00000019071	-	90	83.792	ENSJJAG00000005424	Prdm12	98	83.486	Jaculus_jaculus
ENSSDUG00000019071	-	100	75.921	ENSKMAG00000016921	prdm12b	100	76.167	Kryptolebias_marmoratus
ENSSDUG00000019071	-	88	88.785	ENSKMAG00000021205	-	93	86.626	Kryptolebias_marmoratus
ENSSDUG00000019071	-	100	81.299	ENSLBEG00000017769	prdm12b	100	81.039	Labrus_bergylta
ENSSDUG00000019071	-	100	91.192	ENSLBEG00000007776	-	100	90.500	Labrus_bergylta
ENSSDUG00000019071	-	100	78.851	ENSLACG00000017560	PRDM12	96	81.686	Latimeria_chalumnae
ENSSDUG00000019071	-	100	83.161	ENSLOCG00000005429	prdm12b	100	83.679	Lepisosteus_oculatus
ENSSDUG00000019071	-	90	83.030	ENSLAFG00000006979	PRDM12	94	79.661	Loxodonta_africana
ENSSDUG00000019071	-	90	83.180	ENSMFAG00000040322	PRDM12	92	81.105	Macaca_fascicularis
ENSSDUG00000019071	-	90	83.180	ENSMNEG00000037234	PRDM12	93	81.105	Macaca_nemestrina
ENSSDUG00000019071	-	100	83.911	ENSMAMG00000018988	-	100	84.158	Mastacembelus_armatus
ENSSDUG00000019071	-	100	80.779	ENSMAMG00000013212	prdm12b	100	80.779	Mastacembelus_armatus
ENSSDUG00000019071	-	100	84.691	ENSMZEG00005000415	PRDM12	100	85.185	Maylandia_zebra
ENSSDUG00000019071	-	95	82.647	ENSMGAG00000005438	PRDM12	96	82.647	Meleagris_gallopavo
ENSSDUG00000019071	-	95	81.395	ENSMAUG00000013040	Prdm12	93	81.395	Mesocricetus_auratus
ENSSDUG00000019071	-	95	81.341	ENSMICG00000015480	PRDM12	93	81.341	Microcebus_murinus
ENSSDUG00000019071	-	95	82.647	ENSMOCG00000021026	Prdm12	93	81.395	Microtus_ochrogaster
ENSSDUG00000019071	-	100	77.344	ENSMODG00000012108	PRDM12	95	81.633	Monodelphis_domestica
ENSSDUG00000019071	-	100	70.027	ENSMALG00000021901	prdm12b	99	69.496	Monopterus_albus
ENSSDUG00000019071	-	92	82.883	MGP_CAROLIEiJ_G0023414	Prdm12	93	81.395	Mus_caroli
ENSSDUG00000019071	-	92	82.883	ENSMUSG00000079466	Prdm12	93	81.395	Mus_musculus
ENSSDUG00000019071	-	92	82.883	MGP_PahariEiJ_G0024871	Prdm12	93	81.395	Mus_pahari
ENSSDUG00000019071	-	92	82.883	MGP_SPRETEiJ_G0024331	Prdm12	93	81.395	Mus_spretus
ENSSDUG00000019071	-	90	84.568	ENSNGAG00000018480	Prdm12	96	81.050	Nannospalax_galili
ENSSDUG00000019071	-	100	81.088	ENSNBRG00000006727	prdm12b	100	81.088	Neolamprologus_brichardi
ENSSDUG00000019071	-	100	78.117	ENSNBRG00000024312	-	100	78.372	Neolamprologus_brichardi
ENSSDUG00000019071	-	100	70.052	ENSMEUG00000003828	PRDM12	95	73.469	Notamacropus_eugenii
ENSSDUG00000019071	-	90	82.875	ENSOPRG00000008680	PRDM12	98	82.875	Ochotona_princeps
ENSSDUG00000019071	-	95	81.977	ENSODEG00000016282	PRDM12	64	81.686	Octodon_degus
ENSSDUG00000019071	-	66	75.610	ENSOANG00000001043	PRDM12	94	81.863	Ornithorhynchus_anatinus
ENSSDUG00000019071	-	85	83.062	ENSOCUG00000008241	PRDM12	97	83.062	Oryctolagus_cuniculus
ENSSDUG00000019071	-	100	86.835	ENSORLG00000017558	-	100	87.848	Oryzias_latipes
ENSSDUG00000019071	-	100	80.519	ENSORLG00000007114	prdm12b	99	80.260	Oryzias_latipes
ENSSDUG00000019071	-	100	80.519	ENSORLG00020019565	prdm12b	99	81.039	Oryzias_latipes_hni
ENSSDUG00000019071	-	100	87.089	ENSORLG00020013167	-	100	88.101	Oryzias_latipes_hni
ENSSDUG00000019071	-	100	86.835	ENSORLG00015003435	-	100	87.848	Oryzias_latipes_hsok
ENSSDUG00000019071	-	100	80.311	ENSORLG00015007621	prdm12b	99	80.311	Oryzias_latipes_hsok
ENSSDUG00000019071	-	100	79.639	ENSOMEG00000004134	prdm12b	99	80.155	Oryzias_melastigma
ENSSDUG00000019071	-	100	86.000	ENSOMEG00000007762	-	100	86.250	Oryzias_melastigma
ENSSDUG00000019071	-	90	83.486	ENSOGAG00000007557	PRDM12	97	83.486	Otolemur_garnettii
ENSSDUG00000019071	-	82	79.392	ENSPPAG00000031506	-	99	79.392	Pan_paniscus
ENSSDUG00000019071	-	95	75.731	ENSPPRG00000023024	PRDM12	87	75.731	Panthera_pardus
ENSSDUG00000019071	-	90	83.180	ENSPTRG00000043324	-	93	81.105	Pan_troglodytes
ENSSDUG00000019071	-	90	83.180	ENSPTRG00000021475	PRDM12	93	81.105	Pan_troglodytes
ENSSDUG00000019071	-	90	83.180	ENSPANG00000025967	PRDM12	93	81.105	Papio_anubis
ENSSDUG00000019071	-	100	84.073	ENSPKIG00000007228	prdm12b	100	84.073	Paramormyrops_kingsleyae
ENSSDUG00000019071	-	95	76.945	ENSPKIG00000004305	PRDM12	99	76.945	Paramormyrops_kingsleyae
ENSSDUG00000019071	-	100	77.807	ENSPSIG00000006739	PRDM12	96	80.466	Pelodiscus_sinensis
ENSSDUG00000019071	-	90	88.073	ENSPMGG00000002356	-	100	78.446	Periophthalmus_magnuspinnatus
ENSSDUG00000019071	-	100	79.221	ENSPMGG00000008867	prdm12b	99	78.295	Periophthalmus_magnuspinnatus
ENSSDUG00000019071	-	92	83.939	ENSPEMG00000009969	Prdm12	90	82.883	Peromyscus_maniculatus_bairdii
ENSSDUG00000019071	-	100	77.604	ENSPCIG00000024119	PRDM12	95	81.924	Phascolarctos_cinereus
ENSSDUG00000019071	-	100	78.961	ENSPFOG00000019841	prdm12b	100	78.961	Poecilia_formosa
ENSSDUG00000019071	-	100	78.295	ENSPLAG00000016626	prdm12b	99	78.036	Poecilia_latipinna
ENSSDUG00000019071	-	97	78.610	ENSPMEG00000016698	prdm12b	99	78.342	Poecilia_mexicana
ENSSDUG00000019071	-	100	77.835	ENSPREG00000015073	prdm12b	99	78.093	Poecilia_reticulata
ENSSDUG00000019071	-	92	81.138	ENSPREG00000003211	-	96	77.746	Poecilia_reticulata
ENSSDUG00000019071	-	97	79.714	ENSPPYG00000019694	PRDM12	98	79.714	Pongo_abelii
ENSSDUG00000019071	-	90	83.486	ENSPCOG00000022255	PRDM12	93	81.395	Propithecus_coquereli
ENSSDUG00000019071	-	90	83.486	ENSPVAG00000001511	PRDM12	93	81.395	Pteropus_vampyrus
ENSSDUG00000019071	-	100	81.865	ENSPNYG00000009607	prdm12b	100	80.829	Pundamilia_nyererei
ENSSDUG00000019071	-	100	84.691	ENSPNYG00000013589	-	100	85.185	Pundamilia_nyererei
ENSSDUG00000019071	-	93	81.845	ENSPNAG00000013396	PRDM12	94	81.792	Pygocentrus_nattereri
ENSSDUG00000019071	-	100	81.984	ENSPNAG00000024532	prdm12b	100	81.984	Pygocentrus_nattereri
ENSSDUG00000019071	-	92	82.883	ENSRNOG00000009218	Prdm12	93	81.395	Rattus_norvegicus
ENSSDUG00000019071	-	88	82.812	ENSRBIG00000042712	PRDM12	91	79.762	Rhinopithecus_bieti
ENSSDUG00000019071	-	89	83.025	ENSRROG00000043554	PRDM12	99	83.025	Rhinopithecus_roxellana
ENSSDUG00000019071	-	100	77.143	ENSSHAG00000015972	PRDM12	96	81.395	Sarcophilus_harrisii
ENSSDUG00000019071	-	100	78.261	ENSSMAG00000003754	prdm12b	100	79.093	Scophthalmus_maximus
ENSSDUG00000019071	-	100	81.748	ENSSLDG00000009557	prdm12b	100	81.234	Seriola_lalandi_dorsalis
ENSSDUG00000019071	-	94	94.985	ENSSLDG00000013562	-	97	94.985	Seriola_lalandi_dorsalis
ENSSDUG00000019071	-	100	77.807	ENSSPUG00000013424	PRDM12	96	81.050	Sphenodon_punctatus
ENSSDUG00000019071	-	100	82.895	ENSSPAG00000022420	-	100	84.474	Stegastes_partitus
ENSSDUG00000019071	-	100	81.347	ENSSPAG00000018824	prdm12b	100	81.088	Stegastes_partitus
ENSSDUG00000019071	-	90	83.486	ENSSSCG00000005703	PRDM12	93	81.395	Sus_scrofa
ENSSDUG00000019071	-	100	82.597	ENSTRUG00000013239	-	100	82.597	Takifugu_rubripes
ENSSDUG00000019071	-	100	78.093	ENSTRUG00000018659	prdm12b	100	78.351	Takifugu_rubripes
ENSSDUG00000019071	-	93	84.776	ENSTNIG00000005859	-	95	84.639	Tetraodon_nigroviridis
ENSSDUG00000019071	-	100	77.835	ENSTNIG00000009020	prdm12b	99	77.835	Tetraodon_nigroviridis
ENSSDUG00000019071	-	90	83.486	ENSUAMG00000009653	PRDM12	94	80.814	Ursus_americanus
ENSSDUG00000019071	-	90	83.486	ENSVVUG00000027662	PRDM12	77	83.486	Vulpes_vulpes
ENSSDUG00000019071	-	100	79.634	ENSXCOG00000002836	prdm12b	99	79.112	Xiphophorus_couchianus
ENSSDUG00000019071	-	100	79.634	ENSXMAG00000005537	prdm12b	100	79.634	Xiphophorus_maculatus
ENSSDUG00000019071	-	100	85.536	ENSXMAG00000028012	-	100	85.536	Xiphophorus_maculatus