EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000019139 (Gene tree)
Gene ID: 111225583
Gene Symbol: rpusd2
Alias: -
Full Name: RNA pseudouridine synthase domain containing 2
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 3602 bases
Position: chrBDQW01000149.1:11461241-11464842
Accession: 111225583
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000026373	PseudoU_synth_2	PF00849.22	4.8e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000026843	-	2483	XM_022750547	ENSSDUP00000026373	602 (aa)	XP_022606268	UPI000BBEB884

Gene Model

Click here to download ENSSDUG00000019139's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000019139's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000019139	rpusd2	82	55.263	ENSG00000166133	RPUSD2	80	55.975	Homo_sapiens
ENSSDUG00000019139	rpusd2	100	72.517	ENSAPOG00000000817	rpusd2	100	72.517	Acanthochromis_polyacanthus
ENSSDUG00000019139	rpusd2	84	54.150	ENSAMEG00000016996	RPUSD2	80	55.741	Ailuropoda_melanoleuca
ENSSDUG00000019139	rpusd2	90	76.147	ENSACIG00000024029	rpusd2	100	76.147	Amphilophus_citrinellus
ENSSDUG00000019139	rpusd2	100	73.727	ENSAOCG00000015237	rpusd2	100	73.727	Amphiprion_ocellaris
ENSSDUG00000019139	rpusd2	100	73.235	ENSAPEG00000021763	rpusd2	100	73.235	Amphiprion_percula
ENSSDUG00000019139	rpusd2	100	74.877	ENSATEG00000015242	rpusd2	100	74.877	Anabas_testudineus
ENSSDUG00000019139	rpusd2	77	57.204	ENSAPLG00000004723	RPUSD2	100	56.989	Anas_platyrhynchos
ENSSDUG00000019139	rpusd2	80	57.938	ENSACAG00000013893	RPUSD2	91	58.058	Anolis_carolinensis
ENSSDUG00000019139	rpusd2	91	52.198	ENSANAG00000009691	RPUSD2	89	51.465	Aotus_nancymaae
ENSSDUG00000019139	rpusd2	100	71.287	ENSACLG00000019531	rpusd2	100	71.287	Astatotilapia_calliptera
ENSSDUG00000019139	rpusd2	86	64.916	ENSAMXG00000013376	rpusd2	87	65.094	Astyanax_mexicanus
ENSSDUG00000019139	rpusd2	86	54.054	ENSBTAG00000003193	RPUSD2	79	55.925	Bos_taurus
ENSSDUG00000019139	rpusd2	82	54.839	ENSCJAG00000020841	RPUSD2	80	55.833	Callithrix_jacchus
ENSSDUG00000019139	rpusd2	88	51.273	ENSCAFG00000009165	RPUSD2	91	51.282	Canis_familiaris
ENSSDUG00000019139	rpusd2	88	51.273	ENSCAFG00020005849	RPUSD2	79	55.532	Canis_lupus_dingo
ENSSDUG00000019139	rpusd2	86	53.876	ENSCHIG00000006152	RPUSD2	79	56.042	Capra_hircus
ENSSDUG00000019139	rpusd2	89	53.933	ENSTSYG00000012844	RPUSD2	87	53.184	Carlito_syrichta
ENSSDUG00000019139	rpusd2	86	54.633	ENSCPOG00000013201	RPUSD2	80	56.904	Cavia_porcellus
ENSSDUG00000019139	rpusd2	89	52.908	ENSCCAG00000024378	RPUSD2	80	56.042	Cebus_capucinus
ENSSDUG00000019139	rpusd2	85	52.908	ENSCATG00000043734	RPUSD2	80	56.276	Cercocebus_atys
ENSSDUG00000019139	rpusd2	90	52.855	ENSCLAG00000011862	RPUSD2	92	51.941	Chinchilla_lanigera
ENSSDUG00000019139	rpusd2	82	55.668	ENSCSAG00000007538	RPUSD2	95	52.363	Chlorocebus_sabaeus
ENSSDUG00000019139	rpusd2	64	52.083	ENSCHOG00000004834	RPUSD2	63	52.865	Choloepus_hoffmanni
ENSSDUG00000019139	rpusd2	86	56.711	ENSCPBG00000013419	RPUSD2	88	58.969	Chrysemys_picta_bellii
ENSSDUG00000019139	rpusd2	82	55.668	ENSCANG00000003659	RPUSD2	89	52.363	Colobus_angolensis_palliatus
ENSSDUG00000019139	rpusd2	84	55.268	ENSCGRG00001009839	Rpusd2	76	56.250	Cricetulus_griseus_chok1gshd
ENSSDUG00000019139	rpusd2	84	55.268	ENSCGRG00000012348	Rpusd2	78	56.250	Cricetulus_griseus_crigri
ENSSDUG00000019139	rpusd2	100	66.612	ENSCSEG00000001953	rpusd2	99	66.612	Cynoglossus_semilaevis
ENSSDUG00000019139	rpusd2	99	70.167	ENSCVAG00000010848	rpusd2	99	70.167	Cyprinodon_variegatus
ENSSDUG00000019139	rpusd2	86	65.067	ENSDARG00000060992	rpusd2	82	66.078	Danio_rerio
ENSSDUG00000019139	rpusd2	88	52.731	ENSDNOG00000047745	RPUSD2	81	55.208	Dasypus_novemcinctus
ENSSDUG00000019139	rpusd2	79	55.672	ENSDORG00000009092	Rpusd2	99	55.672	Dipodomys_ordii
ENSSDUG00000019139	rpusd2	79	45.833	FBgn0051719	RluA-1	63	45.833	Drosophila_melanogaster
ENSSDUG00000019139	rpusd2	89	40.741	FBgn0032256	RluA-2	80	44.000	Drosophila_melanogaster
ENSSDUG00000019139	rpusd2	88	54.511	ENSETEG00000008581	RPUSD2	91	53.875	Echinops_telfairi
ENSSDUG00000019139	rpusd2	76	32.974	ENSEBUG00000012149	rpusd2	83	32.974	Eptatretus_burgeri
ENSSDUG00000019139	rpusd2	89	52.434	ENSEASG00005016463	RPUSD2	78	55.417	Equus_asinus_asinus
ENSSDUG00000019139	rpusd2	89	52.434	ENSECAG00000024178	RPUSD2	78	55.417	Equus_caballus
ENSSDUG00000019139	rpusd2	92	45.307	ENSEEUG00000005132	RPUSD2	83	48.548	Erinaceus_europaeus
ENSSDUG00000019139	rpusd2	87	66.667	ENSELUG00000016786	rpusd2	90	66.288	Esox_lucius
ENSSDUG00000019139	rpusd2	90	50.626	ENSFCAG00000040796	RPUSD2	93	50.631	Felis_catus
ENSSDUG00000019139	rpusd2	78	58.562	ENSFALG00000001122	RPUSD2	97	59.213	Ficedula_albicollis
ENSSDUG00000019139	rpusd2	87	52.222	ENSFDAG00000003070	RPUSD2	97	52.239	Fukomys_damarensis
ENSSDUG00000019139	rpusd2	100	67.715	ENSFHEG00000007518	rpusd2	99	67.715	Fundulus_heteroclitus
ENSSDUG00000019139	rpusd2	85	70.543	ENSGMOG00000011014	rpusd2	99	70.543	Gadus_morhua
ENSSDUG00000019139	rpusd2	84	57.791	ENSGALG00000041216	RPUSD2	94	59.213	Gallus_gallus
ENSSDUG00000019139	rpusd2	100	66.942	ENSGAFG00000003390	rpusd2	97	66.942	Gambusia_affinis
ENSSDUG00000019139	rpusd2	90	77.122	ENSGACG00000008656	rpusd2	99	77.122	Gasterosteus_aculeatus
ENSSDUG00000019139	rpusd2	84	58.755	ENSGAGG00000013098	RPUSD2	85	59.875	Gopherus_agassizii
ENSSDUG00000019139	rpusd2	82	55.466	ENSGGOG00000006684	RPUSD2	80	56.184	Gorilla_gorilla
ENSSDUG00000019139	rpusd2	100	71.452	ENSHBUG00000023777	rpusd2	100	71.452	Haplochromis_burtoni
ENSSDUG00000019139	rpusd2	90	51.565	ENSHGLG00000012765	RPUSD2	89	51.009	Heterocephalus_glaber_female
ENSSDUG00000019139	rpusd2	90	51.565	ENSHGLG00100006653	RPUSD2	89	51.009	Heterocephalus_glaber_male
ENSSDUG00000019139	rpusd2	89	72.285	ENSHCOG00000015587	rpusd2	86	72.285	Hippocampus_comes
ENSSDUG00000019139	rpusd2	85	68.164	ENSIPUG00000021006	rpusd2	82	67.969	Ictalurus_punctatus
ENSSDUG00000019139	rpusd2	89	53.933	ENSSTOG00000025619	RPUSD2	79	56.785	Ictidomys_tridecemlineatus
ENSSDUG00000019139	rpusd2	80	56.965	ENSJJAG00000023160	Rpusd2	82	56.965	Jaculus_jaculus
ENSSDUG00000019139	rpusd2	86	74.761	ENSKMAG00000006618	rpusd2	98	67.107	Kryptolebias_marmoratus
ENSSDUG00000019139	rpusd2	100	71.808	ENSLBEG00000021571	rpusd2	99	71.808	Labrus_bergylta
ENSSDUG00000019139	rpusd2	79	58.491	ENSLACG00000017338	RPUSD2	99	58.491	Latimeria_chalumnae
ENSSDUG00000019139	rpusd2	88	64.419	ENSLOCG00000014755	rpusd2	99	64.419	Lepisosteus_oculatus
ENSSDUG00000019139	rpusd2	88	53.832	ENSLAFG00000015588	RPUSD2	83	56.965	Loxodonta_africana
ENSSDUG00000019139	rpusd2	85	52.908	ENSMFAG00000045062	RPUSD2	80	56.276	Macaca_fascicularis
ENSSDUG00000019139	rpusd2	85	52.908	ENSMMUG00000001483	RPUSD2	80	56.276	Macaca_mulatta
ENSSDUG00000019139	rpusd2	85	46.269	ENSMNEG00000041429	RPUSD2	80	48.857	Macaca_nemestrina
ENSSDUG00000019139	rpusd2	63	53.403	ENSMLEG00000036551	RPUSD2	80	53.403	Mandrillus_leucophaeus
ENSSDUG00000019139	rpusd2	100	72.862	ENSMAMG00000001077	rpusd2	98	72.862	Mastacembelus_armatus
ENSSDUG00000019139	rpusd2	90	75.686	ENSMZEG00005006947	rpusd2	100	75.686	Maylandia_zebra
ENSSDUG00000019139	rpusd2	81	58.351	ENSMGAG00000003058	RPUSD2	97	58.592	Meleagris_gallopavo
ENSSDUG00000019139	rpusd2	91	52.527	ENSMAUG00000020467	Rpusd2	78	56.289	Mesocricetus_auratus
ENSSDUG00000019139	rpusd2	88	52.574	ENSMICG00000028637	RPUSD2	92	51.661	Microcebus_murinus
ENSSDUG00000019139	rpusd2	87	54.789	ENSMOCG00000020061	Rpusd2	79	56.875	Microtus_ochrogaster
ENSSDUG00000019139	rpusd2	100	74.252	ENSMMOG00000012020	rpusd2	99	74.252	Mola_mola
ENSSDUG00000019139	rpusd2	83	55.227	ENSMODG00000000300	RPUSD2	80	56.549	Monodelphis_domestica
ENSSDUG00000019139	rpusd2	100	73.892	ENSMALG00000010024	rpusd2	100	73.892	Monopterus_albus
ENSSDUG00000019139	rpusd2	91	53.333	MGP_CAROLIEiJ_G0024130	Rpusd2	90	52.545	Mus_caroli
ENSSDUG00000019139	rpusd2	91	52.813	ENSMUSG00000027324	Rpusd2	78	56.667	Mus_musculus
ENSSDUG00000019139	rpusd2	91	52.252	MGP_PahariEiJ_G0025573	Rpusd2	78	55.833	Mus_pahari
ENSSDUG00000019139	rpusd2	91	52.813	MGP_SPRETEiJ_G0025046	Rpusd2	79	56.667	Mus_spretus
ENSSDUG00000019139	rpusd2	89	52.720	ENSMPUG00000008517	RPUSD2	79	55.950	Mustela_putorius_furo
ENSSDUG00000019139	rpusd2	89	52.285	ENSMLUG00000007971	RPUSD2	98	51.941	Myotis_lucifugus
ENSSDUG00000019139	rpusd2	85	56.078	ENSNGAG00000014126	Rpusd2	80	57.500	Nannospalax_galili
ENSSDUG00000019139	rpusd2	100	70.199	ENSNBRG00000010070	rpusd2	100	70.199	Neolamprologus_brichardi
ENSSDUG00000019139	rpusd2	82	55.061	ENSNLEG00000035735	RPUSD2	80	55.765	Nomascus_leucogenys
ENSSDUG00000019139	rpusd2	85	55.577	ENSMEUG00000008500	RPUSD2	84	57.173	Notamacropus_eugenii
ENSSDUG00000019139	rpusd2	82	55.242	ENSOPRG00000014177	-	81	55.833	Ochotona_princeps
ENSSDUG00000019139	rpusd2	86	54.054	ENSODEG00000017193	RPUSD2	81	56.276	Octodon_degus
ENSSDUG00000019139	rpusd2	90	74.862	ENSONIG00000020102	rpusd2	100	74.862	Oreochromis_niloticus
ENSSDUG00000019139	rpusd2	93	51.207	ENSOCUG00000015745	RPUSD2	78	57.083	Oryctolagus_cuniculus
ENSSDUG00000019139	rpusd2	99	65.182	ENSORLG00000015516	rpusd2	99	64.191	Oryzias_latipes
ENSSDUG00000019139	rpusd2	99	64.463	ENSORLG00020010533	rpusd2	99	64.298	Oryzias_latipes_hni
ENSSDUG00000019139	rpusd2	99	63.967	ENSORLG00015009206	rpusd2	99	63.306	Oryzias_latipes_hsok
ENSSDUG00000019139	rpusd2	99	65.672	ENSOMEG00000007355	rpusd2	90	65.615	Oryzias_melastigma
ENSSDUG00000019139	rpusd2	90	51.786	ENSOGAG00000004867	RPUSD2	84	56.250	Otolemur_garnettii
ENSSDUG00000019139	rpusd2	80	56.965	ENSOARG00000020235	RPUSD2	91	52.974	Ovis_aries
ENSSDUG00000019139	rpusd2	87	52.198	ENSPPAG00000032874	RPUSD2	80	55.765	Pan_paniscus
ENSSDUG00000019139	rpusd2	90	51.630	ENSPPRG00000010446	RPUSD2	80	55.741	Panthera_pardus
ENSSDUG00000019139	rpusd2	88	52.022	ENSPTIG00000013316	RPUSD2	91	52.037	Panthera_tigris_altaica
ENSSDUG00000019139	rpusd2	87	52.381	ENSPTRG00000006924	RPUSD2	80	55.975	Pan_troglodytes
ENSSDUG00000019139	rpusd2	85	53.096	ENSPANG00000019339	RPUSD2	80	56.485	Papio_anubis
ENSSDUG00000019139	rpusd2	84	64.522	ENSPKIG00000023017	rpusd2	81	64.522	Paramormyrops_kingsleyae
ENSSDUG00000019139	rpusd2	64	55.670	ENSPSIG00000012680	RPUSD2	100	55.670	Pelodiscus_sinensis
ENSSDUG00000019139	rpusd2	76	85.095	ENSPMGG00000018165	rpusd2	84	85.095	Periophthalmus_magnuspinnatus
ENSSDUG00000019139	rpusd2	84	55.556	ENSPEMG00000012878	Rpusd2	82	56.549	Peromyscus_maniculatus_bairdii
ENSSDUG00000019139	rpusd2	84	62.434	ENSPCIG00000023199	RPUSD2	80	68.827	Phascolarctos_cinereus
ENSSDUG00000019139	rpusd2	100	67.603	ENSPFOG00000006829	rpusd2	98	67.603	Poecilia_formosa
ENSSDUG00000019139	rpusd2	88	72.693	ENSPLAG00000022914	rpusd2	99	72.693	Poecilia_latipinna
ENSSDUG00000019139	rpusd2	100	67.219	ENSPMEG00000009835	rpusd2	99	72.693	Poecilia_mexicana
ENSSDUG00000019139	rpusd2	100	66.833	ENSPREG00000016441	rpusd2	94	66.833	Poecilia_reticulata
ENSSDUG00000019139	rpusd2	82	54.858	ENSPPYG00000006355	RPUSD2	80	55.556	Pongo_abelii
ENSSDUG00000019139	rpusd2	90	52.321	ENSPCOG00000028019	RPUSD2	93	51.532	Propithecus_coquereli
ENSSDUG00000019139	rpusd2	95	50.769	ENSPVAG00000001837	RPUSD2	99	50.085	Pteropus_vampyrus
ENSSDUG00000019139	rpusd2	86	75.915	ENSPNYG00000021507	rpusd2	94	75.915	Pundamilia_nyererei
ENSSDUG00000019139	rpusd2	91	52.641	ENSRNOG00000046797	Rpusd2	78	56.250	Rattus_norvegicus
ENSSDUG00000019139	rpusd2	91	52.641	ENSRNOG00000010528	LOC100911166	78	56.250	Rattus_norvegicus
ENSSDUG00000019139	rpusd2	82	55.668	ENSRBIG00000030813	RPUSD2	80	56.276	Rhinopithecus_bieti
ENSSDUG00000019139	rpusd2	82	55.466	ENSRROG00000026664	RPUSD2	80	56.067	Rhinopithecus_roxellana
ENSSDUG00000019139	rpusd2	55	42.515	YDL036C	-	71	42.515	Saccharomyces_cerevisiae
ENSSDUG00000019139	rpusd2	83	55.622	ENSSBOG00000035031	RPUSD2	80	56.458	Saimiri_boliviensis_boliviensis
ENSSDUG00000019139	rpusd2	64	51.908	ENSSHAG00000015108	RPUSD2	91	51.908	Sarcophilus_harrisii
ENSSDUG00000019139	rpusd2	99	55.887	ENSSFOG00015019057	rpusd2	95	55.712	Scleropages_formosus
ENSSDUG00000019139	rpusd2	100	78.383	ENSSMAG00000000903	rpusd2	100	81.284	Scophthalmus_maximus
ENSSDUG00000019139	rpusd2	100	97.010	ENSSLDG00000005938	rpusd2	100	97.010	Seriola_lalandi_dorsalis
ENSSDUG00000019139	rpusd2	87	54.302	ENSSARG00000002792	RPUSD2	81	56.846	Sorex_araneus
ENSSDUG00000019139	rpusd2	91	51.825	ENSSPUG00000001206	RPUSD2	89	55.852	Sphenodon_punctatus
ENSSDUG00000019139	rpusd2	100	70.627	ENSSPAG00000003578	rpusd2	100	70.627	Stegastes_partitus
ENSSDUG00000019139	rpusd2	90	52.468	ENSSSCG00000036700	RPUSD2	91	51.654	Sus_scrofa
ENSSDUG00000019139	rpusd2	86	74.615	ENSTRUG00000025880	rpusd2	95	75.337	Takifugu_rubripes
ENSSDUG00000019139	rpusd2	88	71.321	ENSTNIG00000017329	rpusd2	99	71.321	Tetraodon_nigroviridis
ENSSDUG00000019139	rpusd2	86	47.940	ENSTBEG00000007933	RPUSD2	90	47.925	Tupaia_belangeri
ENSSDUG00000019139	rpusd2	90	52.952	ENSTTRG00000010585	RPUSD2	93	53.455	Tursiops_truncatus
ENSSDUG00000019139	rpusd2	88	52.486	ENSUAMG00000001470	RPUSD2	97	52.505	Ursus_americanus
ENSSDUG00000019139	rpusd2	88	52.486	ENSUMAG00000012487	RPUSD2	80	52.505	Ursus_maritimus
ENSSDUG00000019139	rpusd2	88	52.661	ENSVPAG00000003844	RPUSD2	80	56.432	Vicugna_pacos
ENSSDUG00000019139	rpusd2	88	51.356	ENSVVUG00000026590	RPUSD2	92	51.366	Vulpes_vulpes
ENSSDUG00000019139	rpusd2	84	56.607	ENSXETG00000015973	rpusd2	95	57.557	Xenopus_tropicalis
ENSSDUG00000019139	rpusd2	100	68.046	ENSXMAG00000021821	rpusd2	99	72.983	Xiphophorus_maculatus